data_145 # _chem_comp.id 145 _chem_comp.name "2-nitrophenyl beta-D-galactopyranoside" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C12 H15 N O8" _chem_comp.mon_nstd_parent_comp_id GAL _chem_comp.pdbx_synonyms ;1-O-[O-NITROPHENYL]-BETA-D-GALACTOPYRANOSE; 2-nitrophenyl beta-D-galactoside; 2-nitrophenyl D-galactoside; 2-nitrophenyl galactoside ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-09-26 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 301.249 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 145 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1JYV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 145 1-O-[O-NITROPHENYL]-BETA-D-GALACTOPYRANOSE PDB ? 2 145 "2-nitrophenyl beta-D-galactoside" PDB ? 3 145 "2-nitrophenyl D-galactoside" PDB ? 4 145 "2-nitrophenyl galactoside" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 145 C1 C1 C 0 1 N N S 13.044 -28.124 22.179 -0.585 -0.429 -0.388 C1 145 1 145 C2 C2 C 0 1 N N R 11.878 -28.093 21.215 -1.594 -1.572 -0.258 C2 145 2 145 O2 O2 O 0 1 N N N 12.141 -27.019 20.304 -1.187 -2.666 -1.081 O2 145 3 145 C3 C3 C 0 1 N N S 10.547 -27.909 21.926 -2.973 -1.075 -0.707 C3 145 4 145 O3 O3 O 0 1 N N N 9.436 -27.976 20.945 -3.953 -2.083 -0.451 O3 145 5 145 C4 C4 C 0 1 N N R 10.378 -28.922 23.066 -3.317 0.193 0.083 C4 145 6 145 O4 O4 O 0 1 N N N 10.128 -30.251 22.521 -3.483 -0.134 1.464 O4 145 7 145 C5 C5 C 0 1 N N R 11.638 -28.824 23.946 -2.178 1.203 -0.075 C5 145 8 145 C6 C6 C 0 1 N N N 11.678 -29.827 25.073 -2.528 2.487 0.681 C6 145 9 145 O6 O6 O 0 1 N N N 10.566 -29.649 25.949 -1.523 3.473 0.437 O6 145 10 145 O5 O5 O 0 1 N N N 12.788 -29.141 23.120 -0.972 0.656 0.453 O5 145 11 145 O1 "O1'" O 0 1 N N N 14.144 -28.612 21.404 0.710 -0.893 -0.001 O1 145 12 145 "C1'" "C1'" C 0 1 Y N N 15.369 -28.916 21.970 1.581 0.120 -0.248 "C1'" 145 13 145 "C2'" "C2'" C 0 1 Y N N 16.393 -29.522 21.190 2.929 -0.037 0.037 "C2'" 145 14 145 "C3'" "C3'" C 0 1 Y N N 17.647 -29.828 21.747 3.813 0.992 -0.221 "C3'" 145 15 145 "C4'" "C4'" C 0 1 Y N N 17.949 -29.546 23.034 3.354 2.183 -0.753 "C4'" 145 16 145 "C5'" "C5'" C 0 1 Y N N 16.944 -28.993 23.817 2.009 2.345 -1.033 "C5'" 145 17 145 "C6'" "C6'" C 0 1 Y N N 15.671 -28.672 23.302 1.122 1.316 -0.782 "C6'" 145 18 145 "N1'" "N1'" N 1 1 N N N 16.239 -29.850 19.754 3.422 -1.312 0.606 "N1'" 145 19 145 "O2'" "O2'" O -1 1 N N N 15.233 -29.588 19.159 4.607 -1.453 0.847 "O2'" 145 20 145 "O3'" "O3'" O 0 1 N N N 17.187 -30.412 19.135 2.642 -2.219 0.833 "O3'" 145 21 145 H1 H1 H 0 1 N N N 13.218 -27.135 22.663 -0.553 -0.090 -1.424 H1 145 22 145 H2 H2 H 0 1 N N N 11.788 -29.066 20.678 -1.644 -1.897 0.782 H2 145 23 145 HO2 HO2 H 0 1 N Y N 11.409 -26.999 19.698 -0.314 -2.942 -0.768 HO2 145 24 145 H3 H3 H 0 1 N N N 10.526 -26.898 22.397 -2.951 -0.848 -1.773 H3 145 25 145 HO3 HO3 H 0 1 N Y N 8.604 -27.861 21.389 -3.689 -2.864 -0.957 HO3 145 26 145 H4 H4 H 0 1 N N N 9.491 -28.702 23.705 -4.241 0.624 -0.303 H4 145 27 145 HO4 HO4 H 0 1 N Y N 10.023 -30.878 23.226 -4.205 -0.776 1.515 HO4 145 28 145 H5 H5 H 0 1 N N N 11.637 -27.794 24.374 -2.040 1.431 -1.132 H5 145 29 145 H61 H61 H 0 1 N N N 11.740 -30.873 24.692 -2.579 2.277 1.749 H61 145 30 145 H62 H62 H 0 1 N N N 12.646 -29.790 25.623 -3.493 2.859 0.337 H62 145 31 145 HO6 HO6 H 0 1 N Y N 10.591 -30.280 26.658 -1.781 4.263 0.930 HO6 145 32 145 "H3'" "H3'" H 0 1 N N N 18.433 -30.313 21.144 4.864 0.869 -0.003 "H3'" 145 33 145 "H4'" "H4'" H 0 1 N N N 18.959 -29.755 23.423 4.046 2.988 -0.950 "H4'" 145 34 145 "H5'" "H5'" H 0 1 N N N 17.163 -28.802 24.881 1.653 3.276 -1.448 "H5'" 145 35 145 "H6'" "H6'" H 0 1 N N N 14.900 -28.223 23.950 0.072 1.443 -1.001 "H6'" 145 36 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 145 C1 C2 SING N N 1 145 C1 O5 SING N N 2 145 C1 O1 SING N N 3 145 C1 H1 SING N N 4 145 C2 O2 SING N N 5 145 C2 C3 SING N N 6 145 C2 H2 SING N N 7 145 O2 HO2 SING N N 8 145 C3 O3 SING N N 9 145 C3 C4 SING N N 10 145 C3 H3 SING N N 11 145 O3 HO3 SING N N 12 145 C4 O4 SING N N 13 145 C4 C5 SING N N 14 145 C4 H4 SING N N 15 145 O4 HO4 SING N N 16 145 C5 C6 SING N N 17 145 C5 O5 SING N N 18 145 C5 H5 SING N N 19 145 C6 O6 SING N N 20 145 C6 H61 SING N N 21 145 C6 H62 SING N N 22 145 O6 HO6 SING N N 23 145 O1 "C1'" SING N N 24 145 "C1'" "C2'" DOUB Y N 25 145 "C1'" "C6'" SING Y N 26 145 "C2'" "C3'" SING Y N 27 145 "C2'" "N1'" SING N N 28 145 "C3'" "C4'" DOUB Y N 29 145 "C3'" "H3'" SING N N 30 145 "C4'" "C5'" SING Y N 31 145 "C4'" "H4'" SING N N 32 145 "C5'" "C6'" DOUB Y N 33 145 "C5'" "H5'" SING N N 34 145 "C6'" "H6'" SING N N 35 145 "N1'" "O2'" SING N N 36 145 "N1'" "O3'" DOUB N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 145 SMILES ACDLabs 10.04 "[O-][N+](=O)c2c(OC1OC(C(O)C(O)C1O)CO)cccc2" 145 SMILES_CANONICAL CACTVS 3.341 "OC[C@H]1O[C@@H](Oc2ccccc2[N+]([O-])=O)[C@H](O)[C@@H](O)[C@H]1O" 145 SMILES CACTVS 3.341 "OC[CH]1O[CH](Oc2ccccc2[N+]([O-])=O)[CH](O)[CH](O)[CH]1O" 145 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(c(c1)[N+](=O)[O-])O[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O" 145 SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc(c(c1)[N+](=O)[O-])OC2C(C(C(C(O2)CO)O)O)O" 145 InChI InChI 1.03 "InChI=1S/C12H15NO8/c14-5-8-9(15)10(16)11(17)12(21-8)20-7-4-2-1-3-6(7)13(18)19/h1-4,8-12,14-17H,5H2/t8-,9+,10+,11-,12-/m1/s1" 145 InChIKey InChI 1.03 KUWPCJHYPSUOFW-YBXAARCKSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 145 "SYSTEMATIC NAME" ACDLabs 10.04 "2-nitrophenyl beta-D-galactopyranoside" 145 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R,4S,5R,6S)-2-(hydroxymethyl)-6-(2-nitrophenoxy)oxane-3,4,5-triol" 145 "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 1-O-[O-nitrophenyl]-b-D-galactopyranose # _pdbx_chem_comp_related.comp_id 145 _pdbx_chem_comp_related.related_comp_id GAL _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 145 C1 GAL C1 "Carbohydrate core" 2 145 C2 GAL C2 "Carbohydrate core" 3 145 C3 GAL C3 "Carbohydrate core" 4 145 C4 GAL C4 "Carbohydrate core" 5 145 C5 GAL C5 "Carbohydrate core" 6 145 C6 GAL C6 "Carbohydrate core" 7 145 O1 GAL O1 "Carbohydrate core" 8 145 O2 GAL O2 "Carbohydrate core" 9 145 O3 GAL O3 "Carbohydrate core" 10 145 O4 GAL O4 "Carbohydrate core" 11 145 O5 GAL O5 "Carbohydrate core" 12 145 O6 GAL O6 "Carbohydrate core" 13 145 H1 GAL H1 "Carbohydrate core" 14 145 H2 GAL H2 "Carbohydrate core" 15 145 H3 GAL H3 "Carbohydrate core" 16 145 H4 GAL H4 "Carbohydrate core" 17 145 H5 GAL H5 "Carbohydrate core" 18 145 H61 GAL H61 "Carbohydrate core" 19 145 H62 GAL H62 "Carbohydrate core" 20 145 HO2 GAL HO2 "Carbohydrate core" 21 145 HO3 GAL HO3 "Carbohydrate core" 22 145 HO4 GAL HO4 "Carbohydrate core" 23 145 HO6 GAL HO6 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 145 "CARBOHYDRATE ISOMER" D PDB ? 145 "CARBOHYDRATE RING" pyranose PDB ? 145 "CARBOHYDRATE ANOMER" beta PDB ? 145 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 145 "Create component" 2001-09-26 RCSB 145 "Modify descriptor" 2011-06-04 RCSB 145 "Other modification" 2020-07-03 RCSB 145 "Modify parent residue" 2020-07-17 RCSB 145 "Modify name" 2020-07-17 RCSB 145 "Modify synonyms" 2020-07-17 RCSB 145 "Modify internal type" 2020-07-17 RCSB 145 "Modify linking type" 2020-07-17 RCSB 145 "Modify atom id" 2020-07-17 RCSB 145 "Modify component atom id" 2020-07-17 RCSB 145 "Modify leaving atom flag" 2020-07-17 RCSB ##