data_17X # _chem_comp.id 17X _chem_comp.name "(2S)-2-(2-phenyl-1H-benzimidazol-1-yl)-2-(piperidin-4-yl)ethyl 1-(1-benzyl-1H-benzimidazol-2-yl)piperidine-4-carboxylate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H42 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-03-26 _chem_comp.pdbx_modified_date 2013-05-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 638.800 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 17X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4JVF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 17X CAI CAI C 0 1 Y N N -31.095 10.029 -4.490 3.895 2.507 -0.320 CAI 17X 1 17X CAJ CAJ C 0 1 Y N N -31.882 10.992 -3.846 3.664 3.348 -1.392 CAJ 17X 2 17X CAK CAK C 0 1 Y N N -32.550 10.699 -2.674 4.728 3.862 -2.109 CAK 17X 3 17X CAL CAL C 0 1 Y N N -32.421 9.418 -2.180 6.024 3.535 -1.754 CAL 17X 4 17X CAM CAM C 0 1 Y N N -31.644 8.458 -2.832 6.255 2.694 -0.681 CAM 17X 5 17X CAH CAH C 0 1 Y N N -30.970 8.765 -3.996 5.190 2.179 0.035 CAH 17X 6 17X CAG CAG C 0 1 N N N -30.189 7.803 -4.633 5.442 1.262 1.204 CAG 17X 7 17X NAD NAD N 0 1 Y N N -30.160 7.939 -6.124 5.481 -0.126 0.735 NAD 17X 8 17X CAC CAC C 0 1 Y N N -29.217 8.642 -6.772 6.597 -0.810 0.284 CAC 17X 9 17X CAF CAF C 0 1 Y N N -28.210 9.401 -6.322 7.933 -0.473 0.128 CAF 17X 10 17X CAE CAE C 0 1 Y N N -27.344 10.071 -7.199 8.825 -1.407 -0.360 CAE 17X 11 17X CAX CAX C 0 1 Y N N -27.586 9.957 -8.570 8.393 -2.681 -0.696 CAX 17X 12 17X CAW CAW C 0 1 Y N N -28.686 9.177 -8.987 7.070 -3.033 -0.548 CAW 17X 13 17X CAV CAV C 0 1 Y N N -29.456 8.547 -8.085 6.155 -2.100 -0.055 CAV 17X 14 17X NAY NAY N 0 1 Y N N -30.520 7.760 -8.255 4.821 -2.144 0.198 NAY 17X 15 17X CAB CAB C 0 1 Y N N -30.939 7.381 -7.065 4.423 -0.988 0.668 CAB 17X 16 17X NAA NAA N 0 1 N N N -32.032 6.603 -6.923 3.129 -0.683 1.031 NAA 17X 17 17X CAR CAR C 0 1 N N N -33.079 6.949 -5.925 2.200 -0.922 -0.081 CAR 17X 18 17X CAQ CAQ C 0 1 N N N -33.627 5.692 -5.245 0.801 -0.437 0.308 CAQ 17X 19 17X CAN CAN C 0 1 N N N -32.282 5.453 -7.854 2.728 -1.432 2.228 CAN 17X 20 17X CAO CAO C 0 1 N N N -32.863 4.218 -7.131 1.345 -0.963 2.687 CAO 17X 21 17X CAP CAP C 0 1 N N N -34.060 4.569 -6.251 0.335 -1.190 1.558 CAP 17X 22 17X CAS CAS C 0 1 N N N -34.488 3.314 -5.445 -1.017 -0.675 1.981 CAS 17X 23 17X OAT OAT O 0 1 N N N -34.047 3.114 -4.317 -1.159 -0.177 3.073 OAT 17X 24 17X OAU OAU O 0 1 N N N -35.320 2.392 -6.003 -2.062 -0.768 1.145 OAU 17X 25 17X CBP CBP C 0 1 N N N -36.704 2.598 -5.918 -3.334 -0.252 1.618 CBP 17X 26 17X CBO CBO C 0 1 N N S -37.450 2.008 -4.732 -4.398 -0.445 0.536 CBO 17X 27 17X CBQ CBQ C 0 1 N N N -38.866 2.286 -5.238 -4.445 -1.917 0.124 CBQ 17X 28 17X CBR CBR C 0 1 N N N -39.911 2.160 -4.161 -5.595 -2.136 -0.862 CBR 17X 29 17X CBS CBS C 0 1 N N N -41.130 2.840 -4.755 -5.675 -3.621 -1.224 CBS 17X 30 17X NBV NBV N 0 1 N N N -41.624 2.011 -5.867 -5.893 -4.412 -0.006 NBV 17X 31 17X CBT CBT C 0 1 N N N -40.635 1.592 -6.891 -4.778 -4.255 0.936 CBT 17X 32 17X CBU CBU C 0 1 N N N -39.203 1.410 -6.431 -4.671 -2.789 1.362 CBU 17X 33 17X NBH NBH N 0 1 Y N N -37.083 2.866 -3.481 -4.065 0.379 -0.629 NBH 17X 34 17X CBD CBD C 0 1 Y N N -37.011 4.213 -3.476 -3.705 -0.080 -1.881 CBD 17X 35 17X CBE CBE C 0 1 Y N N -37.212 5.110 -4.452 -3.545 -1.343 -2.435 CBE 17X 36 17X CAZ CAZ C 0 1 Y N N -37.012 6.474 -4.191 -3.166 -1.467 -3.755 CAZ 17X 37 17X CBA CBA C 0 1 Y N N -36.615 6.914 -2.923 -2.944 -0.339 -4.532 CBA 17X 38 17X CBB CBB C 0 1 Y N N -36.413 5.954 -1.943 -3.097 0.912 -4.005 CBB 17X 39 17X CBC CBC C 0 1 Y N N -36.618 4.651 -2.247 -3.481 1.063 -2.668 CBC 17X 40 17X NBF NBF N 0 1 Y N N -36.487 3.599 -1.483 -3.708 2.142 -1.881 NBF 17X 41 17X CBG CBG C 0 1 Y N N -36.760 2.520 -2.230 -4.057 1.746 -0.681 CBG 17X 42 17X CBI CBI C 0 1 Y N N -36.725 1.293 -1.671 -4.389 2.643 0.447 CBI 17X 43 17X CBJ CBJ C 0 1 Y N N -35.607 0.902 -0.873 -3.760 3.883 0.565 CBJ 17X 44 17X CBK CBK C 0 1 Y N N -35.608 -0.387 -0.259 -4.075 4.715 1.620 CBK 17X 45 17X CBL CBL C 0 1 Y N N -36.702 -1.263 -0.418 -5.011 4.322 2.559 CBL 17X 46 17X CBM CBM C 0 1 Y N N -37.807 -0.849 -1.181 -5.638 3.094 2.448 CBM 17X 47 17X CBN CBN C 0 1 Y N N -37.830 0.421 -1.784 -5.337 2.255 1.395 CBN 17X 48 17X H1 H1 H 0 1 N N N -30.575 10.294 -5.399 3.064 2.109 0.243 H1 17X 49 17X H2 H2 H 0 1 N N N -31.968 11.980 -4.273 2.652 3.603 -1.670 H2 17X 50 17X H3 H3 H 0 1 N N N -33.148 11.441 -2.166 4.548 4.519 -2.947 H3 17X 51 17X H4 H4 H 0 1 N N N -32.933 9.151 -1.267 6.855 3.937 -2.314 H4 17X 52 17X H5 H5 H 0 1 N N N -31.570 7.463 -2.420 7.267 2.439 -0.403 H5 17X 53 17X H6 H6 H 0 1 N N N -30.590 6.810 -4.383 6.396 1.515 1.666 H6 17X 54 17X H7 H7 H 0 1 N N N -29.159 7.888 -4.257 4.642 1.376 1.935 H7 17X 55 17X H8 H8 H 0 1 N N N -28.061 9.500 -5.257 8.276 0.518 0.387 H8 17X 56 17X H9 H9 H 0 1 N N N -26.517 10.656 -6.826 9.865 -1.143 -0.482 H9 17X 57 17X H10 H10 H 0 1 N N N -26.950 10.451 -9.290 9.100 -3.403 -1.078 H10 17X 58 17X H11 H11 H 0 1 N N N -28.910 9.086 -10.040 6.741 -4.027 -0.812 H11 17X 59 17X H12 H12 H 0 1 N N N -32.643 7.610 -5.161 2.540 -0.378 -0.962 H12 17X 60 17X H13 H13 H 0 1 N N N -33.903 7.470 -6.434 2.166 -1.988 -0.303 H13 17X 61 17X H14 H14 H 0 1 N N N -34.503 5.976 -4.644 0.831 0.632 0.517 H14 17X 62 17X H15 H15 H 0 1 N N N -32.846 5.285 -4.586 0.109 -0.628 -0.512 H15 17X 63 17X H16 H16 H 0 1 N N N -31.330 5.169 -8.326 2.692 -2.497 1.995 H16 17X 64 17X H17 H17 H 0 1 N N N -32.994 5.775 -8.628 3.452 -1.260 3.025 H17 17X 65 17X H18 H18 H 0 1 N N N -33.182 3.484 -7.886 1.041 -1.531 3.566 H18 17X 66 17X H19 H19 H 0 1 N N N -32.078 3.776 -6.500 1.384 0.098 2.933 H19 17X 67 17X H20 H20 H 0 1 N N N -34.898 4.924 -6.868 0.266 -2.255 1.339 H20 17X 68 17X H21 H21 H 0 1 N N N -36.871 3.685 -5.899 -3.631 -0.788 2.520 H21 17X 69 17X H22 H22 H 0 1 N N N -37.153 2.174 -6.828 -3.233 0.810 1.844 H22 17X 70 17X H23 H23 H 0 1 N N N -37.249 0.937 -4.583 -5.371 -0.146 0.926 H23 17X 71 17X H24 H24 H 0 1 N N N -38.883 3.329 -5.588 -3.502 -2.193 -0.349 H24 17X 72 17X H25 H25 H 0 1 N N N -40.121 1.103 -3.941 -6.533 -1.823 -0.403 H25 17X 73 17X H26 H26 H 0 1 N N N -39.588 2.669 -3.241 -5.418 -1.550 -1.764 H26 17X 74 17X H27 H27 H 0 1 N N N -40.855 3.838 -5.128 -6.503 -3.783 -1.915 H27 17X 75 17X H28 H28 H 0 1 N N N -41.912 2.938 -3.988 -4.742 -3.931 -1.696 H28 17X 76 17X H29 H29 H 0 1 N N N -42.340 2.530 -6.334 -6.044 -5.385 -0.229 H29 17X 77 17X H31 H31 H 0 1 N N N -40.634 2.355 -7.683 -4.953 -4.876 1.814 H31 17X 78 17X H32 H32 H 0 1 N N N -40.974 0.632 -7.307 -3.849 -4.561 0.454 H32 17X 79 17X H33 H33 H 0 1 N N N -39.053 0.357 -6.151 -3.834 -2.670 2.049 H33 17X 80 17X H34 H34 H 0 1 N N N -38.529 1.668 -7.261 -5.594 -2.486 1.857 H34 17X 81 17X H35 H35 H 0 1 N N N -37.526 4.785 -5.433 -3.716 -2.224 -1.834 H35 17X 82 17X H36 H36 H 0 1 N N N -37.167 7.195 -4.980 -3.041 -2.449 -4.187 H36 17X 83 17X H37 H37 H 0 1 N N N -36.471 7.964 -2.715 -2.647 -0.451 -5.564 H37 17X 84 17X H38 H38 H 0 1 N N N -36.097 6.242 -0.951 -2.921 1.783 -4.619 H38 17X 85 17X H39 H39 H 0 1 N N N -34.772 1.573 -0.736 -3.029 4.191 -0.167 H39 17X 86 17X H40 H40 H 0 1 N N N -34.760 -0.695 0.335 -3.589 5.675 1.713 H40 17X 87 17X H41 H41 H 0 1 N N N -36.691 -2.240 0.041 -5.254 4.977 3.383 H41 17X 88 17X H42 H42 H 0 1 N N N -38.649 -1.514 -1.306 -6.368 2.792 3.185 H42 17X 89 17X H43 H43 H 0 1 N N N -38.702 0.733 -2.340 -5.830 1.298 1.307 H43 17X 90 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 17X CAW CAX DOUB Y N 1 17X CAW CAV SING Y N 2 17X CAX CAE SING Y N 3 17X NAY CAV SING Y N 4 17X NAY CAB DOUB Y N 5 17X CAV CAC DOUB Y N 6 17X CAN CAO SING N N 7 17X CAN NAA SING N N 8 17X CAE CAF DOUB Y N 9 17X CAO CAP SING N N 10 17X CAB NAA SING N N 11 17X CAB NAD SING Y N 12 17X NAA CAR SING N N 13 17X CBT CBU SING N N 14 17X CBT NBV SING N N 15 17X CAC CAF SING Y N 16 17X CAC NAD SING Y N 17 17X CBU CBQ SING N N 18 17X CAP CAS SING N N 19 17X CAP CAQ SING N N 20 17X NAD CAG SING N N 21 17X OAU CBP SING N N 22 17X OAU CAS SING N N 23 17X CAR CAQ SING N N 24 17X CBP CBO SING N N 25 17X NBV CBS SING N N 26 17X CAS OAT DOUB N N 27 17X CBQ CBO SING N N 28 17X CBQ CBR SING N N 29 17X CBS CBR SING N N 30 17X CBO NBH SING N N 31 17X CAG CAH SING N N 32 17X CAI CAH DOUB Y N 33 17X CAI CAJ SING Y N 34 17X CBE CAZ DOUB Y N 35 17X CBE CBD SING Y N 36 17X CAZ CBA SING Y N 37 17X CAH CAM SING Y N 38 17X CAJ CAK DOUB Y N 39 17X NBH CBD SING Y N 40 17X NBH CBG SING Y N 41 17X CBD CBC DOUB Y N 42 17X CBA CBB DOUB Y N 43 17X CAM CAL DOUB Y N 44 17X CAK CAL SING Y N 45 17X CBC CBB SING Y N 46 17X CBC NBF SING Y N 47 17X CBG CBI SING N N 48 17X CBG NBF DOUB Y N 49 17X CBN CBI DOUB Y N 50 17X CBN CBM SING Y N 51 17X CBI CBJ SING Y N 52 17X CBM CBL DOUB Y N 53 17X CBJ CBK DOUB Y N 54 17X CBL CBK SING Y N 55 17X CAI H1 SING N N 56 17X CAJ H2 SING N N 57 17X CAK H3 SING N N 58 17X CAL H4 SING N N 59 17X CAM H5 SING N N 60 17X CAG H6 SING N N 61 17X CAG H7 SING N N 62 17X CAF H8 SING N N 63 17X CAE H9 SING N N 64 17X CAX H10 SING N N 65 17X CAW H11 SING N N 66 17X CAR H12 SING N N 67 17X CAR H13 SING N N 68 17X CAQ H14 SING N N 69 17X CAQ H15 SING N N 70 17X CAN H16 SING N N 71 17X CAN H17 SING N N 72 17X CAO H18 SING N N 73 17X CAO H19 SING N N 74 17X CAP H20 SING N N 75 17X CBP H21 SING N N 76 17X CBP H22 SING N N 77 17X CBO H23 SING N N 78 17X CBQ H24 SING N N 79 17X CBR H25 SING N N 80 17X CBR H26 SING N N 81 17X CBS H27 SING N N 82 17X CBS H28 SING N N 83 17X NBV H29 SING N N 84 17X CBT H31 SING N N 85 17X CBT H32 SING N N 86 17X CBU H33 SING N N 87 17X CBU H34 SING N N 88 17X CBE H35 SING N N 89 17X CAZ H36 SING N N 90 17X CBA H37 SING N N 91 17X CBB H38 SING N N 92 17X CBJ H39 SING N N 93 17X CBK H40 SING N N 94 17X CBL H41 SING N N 95 17X CBM H42 SING N N 96 17X CBN H43 SING N N 97 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 17X SMILES ACDLabs 12.01 "O=C(OCC(n2c3ccccc3nc2c1ccccc1)C4CCNCC4)C8CCN(c5nc7c(n5Cc6ccccc6)cccc7)CC8" 17X InChI InChI 1.03 "InChI=1S/C40H42N6O2/c47-39(32-21-25-44(26-22-32)40-43-33-15-7-9-17-35(33)45(40)27-29-11-3-1-4-12-29)48-28-37(30-19-23-41-24-20-30)46-36-18-10-8-16-34(36)42-38(46)31-13-5-2-6-14-31/h1-18,30,32,37,41H,19-28H2/t37-/m1/s1" 17X InChIKey InChI 1.03 WDALFJYWTFDSRP-DIPNUNPCSA-N 17X SMILES_CANONICAL CACTVS 3.370 "O=C(OC[C@H](C1CCNCC1)n2c3ccccc3nc2c4ccccc4)C5CCN(CC5)c6nc7ccccc7n6Cc8ccccc8" 17X SMILES CACTVS 3.370 "O=C(OC[CH](C1CCNCC1)n2c3ccccc3nc2c4ccccc4)C5CCN(CC5)c6nc7ccccc7n6Cc8ccccc8" 17X SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)Cn2c3ccccc3nc2N4CCC(CC4)C(=O)OC[C@H](C5CCNCC5)n6c7ccccc7nc6c8ccccc8" 17X SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)Cn2c3ccccc3nc2N4CCC(CC4)C(=O)OCC(C5CCNCC5)n6c7ccccc7nc6c8ccccc8" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 17X "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-2-(2-phenyl-1H-benzimidazol-1-yl)-2-(piperidin-4-yl)ethyl 1-(1-benzyl-1H-benzimidazol-2-yl)piperidine-4-carboxylate" 17X "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2S)-2-(2-phenylbenzimidazol-1-yl)-2-piperidin-4-yl-ethyl] 1-[1-(phenylmethyl)benzimidazol-2-yl]piperidine-4-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 17X "Create component" 2013-03-26 RCSB 17X "Initial release" 2013-05-22 RCSB #