data_1C9 # _chem_comp.id 1C9 _chem_comp.name "(2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-7-methoxyquinazolin-6-yl}-4-(piperidin-1-yl)but-2-enamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H25 Cl F N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Dacomitinib _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-12-03 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 469.939 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1C9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4I23 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1C9 C1 C1 C 0 1 Y N N -14.300 40.657 -4.767 0.647 2.936 0.178 C1 1C9 1 1C9 C2 C2 C 0 1 Y N N -14.539 41.280 -6.039 0.221 4.260 0.363 C2 1C9 2 1C9 C3 C3 C 0 1 Y N N -13.722 42.389 -6.429 -1.120 4.569 0.401 C3 1C9 3 1C9 C4 C4 C 0 1 Y N N -12.695 42.888 -5.602 -2.070 3.551 0.255 C4 1C9 4 1C9 C5 C5 C 0 1 Y N N -12.466 42.271 -4.318 -1.639 2.214 0.069 C5 1C9 5 1C9 C6 C6 C 0 1 Y N N -13.274 41.162 -3.922 -0.271 1.919 0.033 C6 1C9 6 1C9 N7 N7 N 0 1 Y N N -11.961 43.936 -6.051 -3.388 3.803 0.292 N7 1C9 7 1C9 C8 C8 C 0 1 Y N N -10.988 44.393 -5.236 -4.256 2.830 0.158 C8 1C9 8 1C9 N9 N9 N 0 1 Y N N -10.683 43.908 -4.013 -3.901 1.568 -0.028 N9 1C9 9 1C9 C10 C10 C 0 1 Y N N -11.420 42.842 -3.540 -2.625 1.208 -0.075 C10 1C9 10 1C9 N14 N14 N 0 1 N N N -11.126 42.307 -2.246 -2.268 -0.113 -0.259 N14 1C9 11 1C9 C15 C15 C 0 1 Y N N -10.522 42.992 -1.161 -3.254 -1.105 -0.299 C15 1C9 12 1C9 C16 C16 C 0 1 Y N N -10.658 44.408 -0.992 -2.995 -2.363 0.229 C16 1C9 13 1C9 C17 C17 C 0 1 Y N N -10.049 45.074 0.082 -3.969 -3.343 0.183 C17 1C9 14 1C9 C18 C18 C 0 1 Y N N -9.284 44.344 1.023 -5.201 -3.070 -0.388 C18 1C9 15 1C9 C19 C19 C 0 1 Y N N -9.130 42.941 0.886 -5.460 -1.816 -0.914 C19 1C9 16 1C9 C20 C20 C 0 1 Y N N -9.749 42.268 -0.204 -4.490 -0.834 -0.870 C20 1C9 17 1C9 F21 F21 F 0 1 N N N -8.691 44.962 2.055 -6.152 -4.029 -0.431 F21 1C9 18 1C9 CL CL CL 0 0 N N N -10.254 46.779 0.213 -3.647 -4.917 0.842 CL 1C9 19 1C9 O11 O11 O 0 1 N N N -15.572 40.723 -6.787 1.142 5.249 0.504 O11 1C9 20 1C9 C12 C12 C 0 1 N N N -15.906 41.271 -8.065 0.646 6.576 0.689 C12 1C9 21 1C9 N13 N13 N 0 1 N N N -15.101 39.534 -4.417 2.016 2.645 0.142 N13 1C9 22 1C9 C26 C26 C 0 1 N N N -14.530 38.310 -4.028 2.455 1.548 -0.506 C26 1C9 23 1C9 C24 C24 C 0 1 N N N -15.584 37.252 -3.746 3.876 1.176 -0.441 C24 1C9 24 1C9 C23 C23 C 0 1 N N N -14.962 35.900 -3.356 4.310 0.093 -1.081 C23 1C9 25 1C9 C25 C25 C 0 1 N N N -16.066 34.967 -2.845 5.766 -0.289 -1.014 C25 1C9 26 1C9 N33 N33 N 0 1 N N N -15.476 33.780 -2.124 5.889 -1.671 -0.532 N33 1C9 27 1C9 O27 O27 O 0 1 N N N -13.325 38.069 -3.942 1.676 0.867 -1.145 O27 1C9 28 1C9 C30 C30 C 0 1 N N N -16.715 32.866 -2.124 7.266 -2.159 -0.677 C30 1C9 29 1C9 C31 C31 C 0 1 N N N -16.543 31.335 -2.124 7.325 -3.642 -0.303 C31 1C9 30 1C9 C32 C32 C 0 1 N N N -15.131 30.719 -2.124 6.851 -3.818 1.142 C32 1C9 31 1C9 C33 C33 C 0 1 N N N -13.892 31.634 -2.124 5.432 -3.258 1.277 C33 1C9 32 1C9 C34 C34 C 0 1 N N N -14.064 33.164 -2.124 5.428 -1.786 0.858 C34 1C9 33 1C9 H6 H6 H 0 1 N N N -13.102 40.698 -2.962 0.062 0.902 -0.109 H6 1C9 34 1C9 H8 H8 H 0 1 N N N -10.398 45.224 -5.595 -5.309 3.070 0.188 H8 1C9 35 1C9 H20 H20 H 0 1 N N N -9.633 41.199 -0.308 -4.693 0.145 -1.280 H20 1C9 36 1C9 H24 H24 H 0 1 N N N -16.647 37.429 -3.812 4.568 1.781 0.126 H24 1C9 37 1C9 H19 H19 H 0 1 N N N -8.546 42.386 1.605 -6.422 -1.605 -1.358 H19 1C9 38 1C9 H3 H3 H 0 1 N N N -13.898 42.858 -7.386 -1.438 5.591 0.543 H3 1C9 39 1C9 H16 H16 H 0 1 N N N -11.240 44.973 -1.705 -2.034 -2.576 0.673 H16 1C9 40 1C9 H12 H12 H 0 1 N N N -16.741 40.703 -8.501 0.041 6.861 -0.172 H12 1C9 41 1C9 H12A H12A H 0 0 N N N -16.202 42.324 -7.946 0.036 6.614 1.591 H12A 1C9 42 1C9 H12B H12B H 0 0 N N N -15.032 41.208 -8.730 1.484 7.266 0.788 H12B 1C9 43 1C9 H23 H23 H 0 1 N N N -13.914 35.648 -3.430 3.619 -0.512 -1.648 H23 1C9 44 1C9 H25 H25 H 0 1 N N N -16.715 35.523 -2.153 6.208 -0.210 -2.007 H25 1C9 45 1C9 H25A H25A H 0 0 N N N -16.660 34.611 -3.699 6.287 0.382 -0.331 H25A 1C9 46 1C9 HN14 HN14 H 0 0 N N N -11.372 41.350 -2.090 -1.334 -0.353 -0.361 HN14 1C9 47 1C9 HN13 HN13 H 0 0 N N N -16.097 39.618 -4.449 2.648 3.233 0.584 HN13 1C9 48 1C9 H161 H161 H 0 0 N N N -17.297 33.120 -1.226 7.590 -2.032 -1.710 H161 1C9 49 1C9 H17 H17 H 0 1 N N N -17.297 33.120 -3.022 7.924 -1.592 -0.018 H17 1C9 50 1C9 H18 H18 H 0 1 N N N -17.054 30.958 -1.226 6.679 -4.211 -0.970 H18 1C9 51 1C9 H191 H191 H 0 0 N N N -17.054 30.958 -3.022 8.351 -4.000 -0.396 H191 1C9 52 1C9 H201 H201 H 0 0 N N N -15.060 30.088 -1.226 6.851 -4.877 1.399 H201 1C9 53 1C9 H21 H21 H 0 1 N N N -15.060 30.088 -3.022 7.521 -3.280 1.813 H21 1C9 54 1C9 H22 H22 H 0 1 N N N -13.310 31.380 -1.226 4.756 -3.821 0.635 H22 1C9 55 1C9 H231 H231 H 0 0 N N N -13.310 31.380 -3.022 5.105 -3.341 2.314 H231 1C9 56 1C9 H241 H241 H 0 0 N N N -13.553 33.541 -3.022 6.094 -1.220 1.509 H241 1C9 57 1C9 H251 H251 H 0 0 N N N -13.553 33.541 -1.226 4.417 -1.388 0.939 H251 1C9 58 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1C9 C4 C5 SING Y N 1 1C9 C5 C6 DOUB Y N 2 1C9 C5 C10 SING Y N 3 1C9 C6 H6 SING N N 4 1C9 C8 N9 SING Y N 5 1C9 C8 H8 SING N N 6 1C9 C10 N14 SING N N 7 1C9 C15 C16 DOUB Y N 8 1C9 C15 C20 SING Y N 9 1C9 C17 CL SING N N 10 1C9 C17 C18 DOUB Y N 11 1C9 C20 C19 DOUB Y N 12 1C9 C20 H20 SING N N 13 1C9 C24 C23 DOUB N E 14 1C9 C24 H24 SING N N 15 1C9 C26 C24 SING N N 16 1C9 C26 O27 DOUB N N 17 1C9 C19 C18 SING Y N 18 1C9 C19 H19 SING N N 19 1C9 C3 C4 DOUB Y N 20 1C9 C3 C2 SING Y N 21 1C9 C3 H3 SING N N 22 1C9 C16 C17 SING Y N 23 1C9 C16 H16 SING N N 24 1C9 C1 C6 SING Y N 25 1C9 C1 N13 SING N N 26 1C9 C2 C1 DOUB Y N 27 1C9 C18 F21 SING N N 28 1C9 C12 O11 SING N N 29 1C9 C12 H12 SING N N 30 1C9 C12 H12A SING N N 31 1C9 C12 H12B SING N N 32 1C9 C23 C25 SING N N 33 1C9 C23 H23 SING N N 34 1C9 C25 N33 SING N N 35 1C9 C25 H25 SING N N 36 1C9 C25 H25A SING N N 37 1C9 N7 C4 SING Y N 38 1C9 N7 C8 DOUB Y N 39 1C9 N9 C10 DOUB Y N 40 1C9 N14 C15 SING N N 41 1C9 N14 HN14 SING N N 42 1C9 N13 C26 SING N N 43 1C9 N13 HN13 SING N N 44 1C9 O11 C2 SING N N 45 1C9 N33 C30 SING N N 46 1C9 N33 C34 SING N N 47 1C9 C30 C31 SING N N 48 1C9 C31 C32 SING N N 49 1C9 C32 C33 SING N N 50 1C9 C33 C34 SING N N 51 1C9 C30 H161 SING N N 52 1C9 C30 H17 SING N N 53 1C9 C31 H18 SING N N 54 1C9 C31 H191 SING N N 55 1C9 C32 H201 SING N N 56 1C9 C32 H21 SING N N 57 1C9 C33 H22 SING N N 58 1C9 C33 H231 SING N N 59 1C9 C34 H241 SING N N 60 1C9 C34 H251 SING N N 61 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1C9 SMILES ACDLabs 12.01 "Fc1ccc(cc1Cl)Nc4ncnc2c4cc(c(OC)c2)NC(=O)/C=C/CN3CCCCC3" 1C9 InChI InChI 1.03 "InChI=1S/C24H25ClFN5O2/c1-33-22-14-20-17(24(28-15-27-20)29-16-7-8-19(26)18(25)12-16)13-21(22)30-23(32)6-5-11-31-9-3-2-4-10-31/h5-8,12-15H,2-4,9-11H2,1H3,(H,30,32)(H,27,28,29)/b6-5+" 1C9 InChIKey InChI 1.03 LVXJQMNHJWSHET-AATRIKPKSA-N 1C9 SMILES_CANONICAL CACTVS 3.370 "COc1cc2ncnc(Nc3ccc(F)c(Cl)c3)c2cc1NC(=O)\C=C\CN4CCCCC4" 1C9 SMILES CACTVS 3.370 "COc1cc2ncnc(Nc3ccc(F)c(Cl)c3)c2cc1NC(=O)C=CCN4CCCCC4" 1C9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "COc1cc2c(cc1NC(=O)/C=C/CN3CCCCC3)c(ncn2)Nc4ccc(c(c4)Cl)F" 1C9 SMILES "OpenEye OEToolkits" 1.7.6 "COc1cc2c(cc1NC(=O)C=CCN3CCCCC3)c(ncn2)Nc4ccc(c(c4)Cl)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1C9 "SYSTEMATIC NAME" ACDLabs 12.01 "(2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-7-methoxyquinazolin-6-yl}-4-(piperidin-1-yl)but-2-enamide" 1C9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(E)-N-[4-[(3-chloranyl-4-fluoranyl-phenyl)amino]-7-methoxy-quinazolin-6-yl]-4-piperidin-1-yl-but-2-enamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1C9 "Create component" 2012-12-03 RCSB 1C9 "Initial release" 2013-01-11 RCSB 1C9 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 1C9 _pdbx_chem_comp_synonyms.name Dacomitinib _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##