data_1JI # _chem_comp.id 1JI _chem_comp.name "4-chloro-N-[(3S,4R)-4-phenylpyrrolidin-3-yl]-3-{[(1H-pyrrolo[2,3-b]pyridin-5-yl)oxy]methyl}benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H23 Cl N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-06-22 _chem_comp.pdbx_modified_date 2022-06-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 446.929 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1JI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SB1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1JI C10 C1 C 0 1 N N N 24.378 -3.372 -0.691 1.726 0.282 0.545 C10 1JI 1 1JI C13 C2 C 0 1 Y N N 17.062 1.234 -0.032 -5.926 -2.352 0.182 C13 1JI 2 1JI C16 C3 C 0 1 Y N N 19.152 1.927 -1.675 -5.528 0.297 -0.310 C16 1JI 3 1JI C17 C4 C 0 1 Y N N 19.354 1.131 -0.498 -4.429 -0.505 -0.018 C17 1JI 4 1JI C18 C5 C 0 1 Y N N 18.327 0.776 0.324 -4.622 -1.854 0.234 C18 1JI 5 1JI C19 C6 C 0 1 Y N N 15.760 1.084 0.535 -6.525 -3.672 0.385 C19 1JI 6 1JI C20 C7 C 0 1 Y N N 14.892 1.763 -0.291 -7.848 -3.533 0.204 C20 1JI 7 1JI C22 C8 C 0 1 N N S 25.826 -5.343 -0.843 4.050 -0.341 0.933 C22 1JI 8 1JI C23 C9 C 0 1 N N N 26.473 -6.174 0.293 4.206 -0.483 2.462 C23 1JI 9 1JI C25 C10 C 0 1 N N N 28.219 -5.828 -1.332 6.301 0.245 1.702 C25 1JI 10 1JI C26 C11 C 0 1 N N R 26.889 -5.282 -1.969 5.428 0.138 0.433 C26 1JI 11 1JI C27 C12 C 0 1 Y N N 26.405 -6.045 -3.167 6.016 -0.868 -0.524 C27 1JI 12 1JI C28 C13 C 0 1 Y N N 25.768 -5.350 -4.187 6.313 -0.496 -1.821 C28 1JI 13 1JI C1 C14 C 0 1 Y N N 23.738 0.635 0.461 -1.257 3.157 -0.390 C1 1JI 14 1JI C2 C15 C 0 1 Y N N 22.788 -0.052 -0.273 -1.616 1.839 -0.164 C2 1JI 15 1JI C3 C16 C 0 1 Y N N 23.005 -1.377 -0.575 -0.652 0.900 0.140 C3 1JI 16 1JI C4 C17 C 0 1 Y N N 24.198 -1.983 -0.238 0.688 1.282 0.220 C4 1JI 17 1JI C5 C18 C 0 1 Y N N 25.172 -1.272 0.456 1.045 2.612 -0.009 C5 1JI 18 1JI C6 C19 C 0 1 Y N N 24.940 0.047 0.823 0.072 3.541 -0.312 C6 1JI 19 1JI C7 C20 C 0 1 N N N 21.625 0.697 -0.884 -3.064 1.428 -0.250 C7 1JI 20 1JI O8 O1 O 0 1 N N N 20.571 0.649 -0.029 -3.180 0.030 0.021 O8 1JI 21 1JI CL9 CL1 CL 0 0 N N N 23.452 2.258 1.017 -2.475 4.331 -0.779 CL9 1JI 22 1JI O11 O2 O 0 1 N N N 23.487 -3.982 -1.270 1.413 -0.876 0.745 O11 1JI 23 1JI N12 N1 N 0 1 N N N 25.563 -3.986 -0.397 3.020 0.652 0.616 N12 1JI 24 1JI C14 C21 C 0 1 Y N N 16.934 2.029 -1.223 -6.989 -1.480 -0.121 C14 1JI 25 1JI N15 N2 N 0 1 Y N N 17.947 2.399 -2.064 -6.747 -0.197 -0.353 N15 1JI 26 1JI N21 N3 N 0 1 Y N N 15.578 2.342 -1.356 -8.142 -2.230 -0.098 N21 1JI 27 1JI N24 N4 N 0 1 N N N 27.906 -6.408 -0.012 5.328 0.425 2.810 N24 1JI 28 1JI C29 C22 C 0 1 Y N N 25.237 -6.015 -5.273 6.852 -1.419 -2.698 C29 1JI 29 1JI C30 C23 C 0 1 Y N N 25.330 -7.392 -5.362 7.096 -2.713 -2.277 C30 1JI 30 1JI C31 C24 C 0 1 Y N N 25.975 -8.109 -4.352 6.800 -3.084 -0.979 C31 1JI 31 1JI C32 C25 C 0 1 Y N N 26.520 -7.433 -3.248 6.265 -2.160 -0.101 C32 1JI 32 1JI H39 H1 H 0 1 N N N 20.012 2.162 -2.285 -5.378 1.348 -0.506 H39 1JI 33 1JI H40 H2 H 0 1 N N N 18.486 0.172 1.205 -3.788 -2.501 0.464 H40 1JI 34 1JI H41 H3 H 0 1 N N N 15.506 0.544 1.435 -6.002 -4.584 0.634 H41 1JI 35 1JI H42 H4 H 0 1 N N N 13.826 1.836 -0.134 -8.572 -4.330 0.285 H42 1JI 36 1JI H44 H5 H 0 1 N N N 24.913 -5.837 -1.206 3.799 -1.304 0.487 H44 1JI 37 1JI H45 H6 H 0 1 N N N 26.386 -5.625 1.242 3.292 -0.170 2.968 H45 1JI 38 1JI H46 H7 H 0 1 N N N 25.955 -7.141 0.379 4.453 -1.512 2.726 H46 1JI 39 1JI H49 H8 H 0 1 N N N 28.938 -5.004 -1.214 6.876 -0.669 1.846 H49 1JI 40 1JI H48 H9 H 0 1 N N N 28.651 -6.602 -1.983 6.966 1.105 1.634 H48 1JI 41 1JI H50 H10 H 0 1 N N N 27.045 -4.230 -2.248 5.339 1.112 -0.049 H50 1JI 42 1JI H51 H11 H 0 1 N N N 25.687 -4.275 -4.129 6.123 0.515 -2.151 H51 1JI 43 1JI H33 H12 H 0 1 N N N 22.237 -1.946 -1.079 -0.934 -0.127 0.317 H33 1JI 44 1JI H34 H13 H 0 1 N N N 26.109 -1.746 0.709 2.080 2.914 0.052 H34 1JI 45 1JI H35 H14 H 0 1 N N N 25.680 0.603 1.379 0.346 4.571 -0.489 H35 1JI 46 1JI H36 H15 H 0 1 N N N 21.911 1.745 -1.058 -3.645 1.990 0.481 H36 1JI 47 1JI H37 H16 H 0 1 N N N 21.346 0.229 -1.840 -3.441 1.637 -1.252 H37 1JI 48 1JI H38 H17 H 0 1 N N N 26.256 -3.496 0.131 3.270 1.575 0.457 H38 1JI 49 1JI H43 H18 H 0 1 N N N 15.171 2.887 -2.089 -9.033 -1.887 -0.272 H43 1JI 50 1JI H47 H19 H 0 1 N N N 28.473 -5.973 0.688 5.015 1.383 2.864 H47 1JI 51 1JI H52 H21 H 0 1 N N N 24.746 -5.458 -6.057 7.083 -1.128 -3.713 H52 1JI 52 1JI H53 H22 H 0 1 N N N 24.906 -7.911 -6.209 7.517 -3.433 -2.963 H53 1JI 53 1JI H54 H23 H 0 1 N N N 26.055 -9.184 -4.420 6.990 -4.095 -0.650 H54 1JI 54 1JI H55 H24 H 0 1 N N N 27.024 -7.984 -2.468 6.037 -2.450 0.915 H55 1JI 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1JI C1 C2 DOUB Y N 1 1JI C1 C6 SING Y N 2 1JI C1 CL9 SING N N 3 1JI C2 C3 SING Y N 4 1JI C2 C7 SING N N 5 1JI C3 C4 DOUB Y N 6 1JI C4 C5 SING Y N 7 1JI C4 C10 SING N N 8 1JI C5 C6 DOUB Y N 9 1JI C7 O8 SING N N 10 1JI O8 C17 SING N N 11 1JI C10 O11 DOUB N N 12 1JI C10 N12 SING N N 13 1JI N12 C22 SING N N 14 1JI C13 C14 DOUB Y N 15 1JI C13 C18 SING Y N 16 1JI C13 C19 SING Y N 17 1JI C14 N15 SING Y N 18 1JI C14 N21 SING Y N 19 1JI N15 C16 DOUB Y N 20 1JI C16 C17 SING Y N 21 1JI C17 C18 DOUB Y N 22 1JI C19 C20 DOUB Y N 23 1JI C20 N21 SING Y N 24 1JI C22 C23 SING N N 25 1JI C22 C26 SING N N 26 1JI C23 N24 SING N N 27 1JI N24 C25 SING N N 28 1JI C25 C26 SING N N 29 1JI C26 C27 SING N N 30 1JI C27 C28 DOUB Y N 31 1JI C27 C32 SING Y N 32 1JI C28 C29 SING Y N 33 1JI C29 C30 DOUB Y N 34 1JI C30 C31 SING Y N 35 1JI C31 C32 DOUB Y N 36 1JI C16 H39 SING N N 37 1JI C18 H40 SING N N 38 1JI C19 H41 SING N N 39 1JI C20 H42 SING N N 40 1JI C22 H44 SING N N 41 1JI C23 H45 SING N N 42 1JI C23 H46 SING N N 43 1JI C25 H49 SING N N 44 1JI C25 H48 SING N N 45 1JI C26 H50 SING N N 46 1JI C28 H51 SING N N 47 1JI C3 H33 SING N N 48 1JI C5 H34 SING N N 49 1JI C6 H35 SING N N 50 1JI C7 H36 SING N N 51 1JI C7 H37 SING N N 52 1JI N12 H38 SING N N 53 1JI N21 H43 SING N N 54 1JI N24 H47 SING N N 55 1JI C29 H52 SING N N 56 1JI C30 H53 SING N N 57 1JI C31 H54 SING N N 58 1JI C32 H55 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1JI SMILES ACDLabs 12.01 "O=C(NC1CNCC1c1ccccc1)c1ccc(Cl)c(COc2cc3cc[NH]c3nc2)c1" 1JI InChI InChI 1.03 "InChI=1S/C25H23ClN4O2/c26-22-7-6-18(10-19(22)15-32-20-11-17-8-9-28-24(17)29-12-20)25(31)30-23-14-27-13-21(23)16-4-2-1-3-5-16/h1-12,21,23,27H,13-15H2,(H,28,29)(H,30,31)/t21-,23+/m0/s1" 1JI InChIKey InChI 1.03 XQBVNNMIIVBLPN-JTHBVZDNSA-N 1JI SMILES_CANONICAL CACTVS 3.385 "Clc1ccc(cc1COc2cnc3[nH]ccc3c2)C(=O)N[C@@H]4CNC[C@H]4c5ccccc5" 1JI SMILES CACTVS 3.385 "Clc1ccc(cc1COc2cnc3[nH]ccc3c2)C(=O)N[CH]4CNC[CH]4c5ccccc5" 1JI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@@H]2CNC[C@H]2NC(=O)c3ccc(c(c3)COc4cc5cc[nH]c5nc4)Cl" 1JI SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C2CNCC2NC(=O)c3ccc(c(c3)COc4cc5cc[nH]c5nc4)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1JI "SYSTEMATIC NAME" ACDLabs 12.01 "4-chloro-N-[(3S,4R)-4-phenylpyrrolidin-3-yl]-3-{[(1H-pyrrolo[2,3-b]pyridin-5-yl)oxy]methyl}benzamide" 1JI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-chloranyl-~{N}-[(3~{S},4~{R})-4-phenylpyrrolidin-3-yl]-3-(1~{H}-pyrrolo[2,3-b]pyridin-5-yloxymethyl)benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1JI "Create component" 2021-06-22 RCSB 1JI "Initial release" 2022-06-29 RCSB #