data_1OZ # _chem_comp.id 1OZ _chem_comp.name "N-[(3S)-1-methyl-2-oxidanylidene-5-phenyl-3H-1,4-benzodiazepin-3-yl]-1H-indole-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H20 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-07-06 _chem_comp.pdbx_modified_date 2021-10-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 408.452 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1OZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7F8Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1OZ N N1 N 0 1 N N N 5.723 21.373 54.143 -1.900 -0.150 1.518 N 1OZ 1 1OZ CA C1 C 0 1 N N R 6.262 21.979 55.339 -0.890 -1.194 1.683 CA 1OZ 2 1OZ C C2 C 0 1 N N N 5.103 22.266 56.330 -1.402 -2.469 1.070 C 1OZ 3 1OZ O O1 O 0 1 N N N 4.855 21.627 57.363 -1.589 -3.434 1.781 O 1OZ 4 1OZ CAA C3 C 0 1 N N N 3.148 23.694 56.846 -2.211 -3.830 -0.721 CAA 1OZ 5 1OZ CAD C4 C 0 1 Y N N 3.154 20.500 50.054 -5.233 3.301 0.192 CAD 1OZ 6 1OZ CAE C5 C 0 1 Y N N 4.532 20.247 50.126 -4.466 3.150 1.334 CAE 1OZ 7 1OZ CAF C6 C 0 1 Y N N 2.546 21.373 50.978 -5.037 2.469 -0.895 CAF 1OZ 8 1OZ CAG C7 C 0 1 Y N N 4.699 26.091 52.553 -0.954 0.338 -3.143 CAG 1OZ 9 1OZ CAH C8 C 0 1 Y N N 4.146 26.514 53.814 -0.680 -0.998 -3.382 CAH 1OZ 10 1OZ CAI C9 C 0 1 Y N N 11.645 17.383 59.551 6.740 1.420 -0.431 CAI 1OZ 11 1OZ CAJ C10 C 0 1 Y N N 11.915 18.493 60.418 6.155 1.127 -1.656 CAJ 1OZ 12 1OZ CAK C11 C 0 1 Y N N 5.286 20.871 51.127 -3.498 2.168 1.393 CAK 1OZ 13 1OZ CAL C12 C 0 1 Y N N 3.293 21.998 51.978 -4.072 1.484 -0.848 CAL 1OZ 14 1OZ CAM C13 C 0 1 Y N N 5.122 24.771 52.386 -1.465 0.729 -1.927 CAM 1OZ 15 1OZ CAN C14 C 0 1 Y N N 4.010 25.601 54.908 -0.918 -1.939 -2.405 CAN 1OZ 16 1OZ CAO C15 C 0 1 Y N N 10.806 17.535 58.480 6.047 1.243 0.731 CAO 1OZ 17 1OZ CAP C16 C 0 1 Y N N 11.353 19.736 60.196 4.862 0.657 -1.722 CAP 1OZ 18 1OZ CAQ C17 C 0 1 Y N N 9.322 19.369 57.232 3.771 0.475 1.690 CAQ 1OZ 19 1OZ CAU C18 C 0 1 N N N 8.231 21.697 56.759 1.402 -0.370 1.741 CAU 1OZ 20 1OZ CAV C19 C 0 1 N N N 5.539 22.369 53.119 -2.257 0.271 0.356 CAV 1OZ 21 1OZ CAX C20 C 0 1 Y N N 4.670 21.732 52.036 -3.295 1.327 0.299 CAX 1OZ 22 1OZ CAY C21 C 0 1 Y N N 9.154 20.720 57.521 2.645 0.035 1.068 CAY 1OZ 23 1OZ CAZ C22 C 0 1 Y N N 4.976 23.800 53.509 -1.713 -0.218 -0.920 CAZ 1OZ 24 1OZ CBA C23 C 0 1 Y N N 4.454 24.216 54.718 -1.438 -1.562 -1.165 CBA 1OZ 25 1OZ CBB C24 C 0 1 Y N N 10.220 18.852 58.220 4.732 0.761 0.691 CBB 1OZ 26 1OZ CBC C25 C 0 1 Y N N 10.491 19.898 59.040 4.132 0.473 -0.551 CBC 1OZ 27 1OZ NAS N2 N 0 1 N N N 7.212 21.101 56.003 0.349 -0.790 1.013 NAS 1OZ 28 1OZ NAT N3 N 0 1 Y N N 9.815 21.022 58.583 2.855 0.031 -0.298 NAT 1OZ 29 1OZ NBE N4 N 0 1 N N N 4.265 23.373 55.939 -1.656 -2.565 -0.233 NBE 1OZ 30 1OZ OAB O2 O 0 1 N N N 8.325 22.826 56.873 1.325 -0.327 2.954 OAB 1OZ 31 1OZ H3 H3 H 0 1 N N N 6.750 22.932 55.088 -0.697 -1.350 2.745 H3 1OZ 32 1OZ H4 H4 H 0 1 N N N 3.145 22.988 57.689 -1.397 -4.499 -1.002 H4 1OZ 33 1OZ H5 H5 H 0 1 N N N 3.268 24.719 57.227 -2.807 -4.293 0.065 H5 1OZ 34 1OZ H6 H6 H 0 1 N N N 2.197 23.615 56.299 -2.841 -3.640 -1.590 H6 1OZ 35 1OZ H7 H7 H 0 1 N N N 2.558 20.025 49.289 -5.992 4.068 0.152 H7 1OZ 36 1OZ H8 H8 H 0 1 N N N 5.004 19.581 49.419 -4.624 3.802 2.180 H8 1OZ 37 1OZ H9 H9 H 0 1 N N N 1.485 21.562 50.911 -5.639 2.592 -1.783 H9 1OZ 38 1OZ H10 H10 H 0 1 N N N 4.786 26.794 51.738 -0.767 1.074 -3.911 H10 1OZ 39 1OZ H11 H11 H 0 1 N N N 3.828 27.539 53.936 -0.278 -1.304 -4.338 H11 1OZ 40 1OZ H12 H12 H 0 1 N N N 12.105 16.425 59.743 7.755 1.788 -0.398 H12 1OZ 41 1OZ H13 H13 H 0 1 N N N 12.572 18.354 61.264 6.719 1.269 -2.566 H13 1OZ 42 1OZ H14 H14 H 0 1 N N N 6.348 20.685 51.196 -2.899 2.052 2.284 H14 1OZ 43 1OZ H15 H15 H 0 1 N N N 2.825 22.666 52.686 -3.919 0.835 -1.698 H15 1OZ 44 1OZ H16 H16 H 0 1 N N N 5.553 24.454 51.448 -1.677 1.772 -1.745 H16 1OZ 45 1OZ H17 H17 H 0 1 N N N 3.591 25.924 55.850 -0.702 -2.979 -2.600 H17 1OZ 46 1OZ H18 H18 H 0 1 N N N 10.580 16.697 57.837 6.510 1.473 1.679 H18 1OZ 47 1OZ H19 H19 H 0 1 N N N 11.550 20.562 60.863 4.415 0.432 -2.679 H19 1OZ 48 1OZ H20 H20 H 0 1 N N N 8.865 18.819 56.422 3.907 0.586 2.756 H20 1OZ 49 1OZ H22 H22 H 0 1 N N N 7.141 20.107 55.923 0.410 -0.825 0.046 H22 1OZ 50 1OZ H23 H23 H 0 1 N N N 9.838 21.925 59.012 2.208 -0.240 -0.967 H23 1OZ 51 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1OZ CAD CAE DOUB Y N 1 1OZ CAD CAF SING Y N 2 1OZ CAE CAK SING Y N 3 1OZ CAF CAL DOUB Y N 4 1OZ CAK CAX DOUB Y N 5 1OZ CAL CAX SING Y N 6 1OZ CAX CAV SING N N 7 1OZ CAM CAG DOUB Y N 8 1OZ CAM CAZ SING Y N 9 1OZ CAG CAH SING Y N 10 1OZ CAV CAZ SING N N 11 1OZ CAV N DOUB N N 12 1OZ CAZ CBA DOUB Y N 13 1OZ CAH CAN DOUB Y N 14 1OZ N CA SING N N 15 1OZ CBA CAN SING Y N 16 1OZ CBA NBE SING N N 17 1OZ CA NAS SING N N 18 1OZ CA C SING N N 19 1OZ NBE C SING N N 20 1OZ NBE CAA SING N N 21 1OZ NAS CAU SING N N 22 1OZ C O DOUB N N 23 1OZ CAU OAB DOUB N N 24 1OZ CAU CAY SING N N 25 1OZ CAQ CAY DOUB Y N 26 1OZ CAQ CBB SING Y N 27 1OZ CAY NAT SING Y N 28 1OZ CBB CAO DOUB Y N 29 1OZ CBB CBC SING Y N 30 1OZ CAO CAI SING Y N 31 1OZ NAT CBC SING Y N 32 1OZ CBC CAP DOUB Y N 33 1OZ CAI CAJ DOUB Y N 34 1OZ CAP CAJ SING Y N 35 1OZ CA H3 SING N N 36 1OZ CAA H4 SING N N 37 1OZ CAA H5 SING N N 38 1OZ CAA H6 SING N N 39 1OZ CAD H7 SING N N 40 1OZ CAE H8 SING N N 41 1OZ CAF H9 SING N N 42 1OZ CAG H10 SING N N 43 1OZ CAH H11 SING N N 44 1OZ CAI H12 SING N N 45 1OZ CAJ H13 SING N N 46 1OZ CAK H14 SING N N 47 1OZ CAL H15 SING N N 48 1OZ CAM H16 SING N N 49 1OZ CAN H17 SING N N 50 1OZ CAO H18 SING N N 51 1OZ CAP H19 SING N N 52 1OZ CAQ H20 SING N N 53 1OZ NAS H22 SING N N 54 1OZ NAT H23 SING N N 55 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1OZ InChI InChI 1.03 "InChI=1S/C25H20N4O2/c1-29-21-14-8-6-12-18(21)22(16-9-3-2-4-10-16)27-23(25(29)31)28-24(30)20-15-17-11-5-7-13-19(17)26-20/h2-15,23,26H,1H3,(H,28,30)/t23-/m1/s1" 1OZ InChIKey InChI 1.03 NFHRQQKPEBFUJK-HSZRJFAPSA-N 1OZ SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)[C@@H](NC(=O)c2[nH]c3ccccc3c2)N=C(c4ccccc4)c5ccccc15" 1OZ SMILES CACTVS 3.385 "CN1C(=O)[CH](NC(=O)c2[nH]c3ccccc3c2)N=C(c4ccccc4)c5ccccc15" 1OZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1c2ccccc2C(=N[C@@H](C1=O)NC(=O)c3cc4ccccc4[nH]3)c5ccccc5" 1OZ SMILES "OpenEye OEToolkits" 2.0.7 "CN1c2ccccc2C(=NC(C1=O)NC(=O)c3cc4ccccc4[nH]3)c5ccccc5" # _pdbx_chem_comp_identifier.comp_id 1OZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(3~{S})-1-methyl-2-oxidanylidene-5-phenyl-3~{H}-1,4-benzodiazepin-3-yl]-1~{H}-indole-2-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1OZ "Create component" 2021-07-06 PDBJ 1OZ "Initial release" 2021-10-13 RCSB ##