data_1T9 # _chem_comp.id 1T9 _chem_comp.name "(2S,3R,4E)-3-hydroxy-2-(octanoylamino)octadec-4-en-1-yl dihydrogen phosphate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H52 N O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-05-28 _chem_comp.pdbx_modified_date 2013-07-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 505.668 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 1T9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4KF6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 1T9 CAI CAI C 0 1 N N N -23.637 -0.545 29.622 10.405 -0.069 0.206 CAI 1T9 1 1T9 CAJ CAJ C 0 1 N N N -22.766 -1.077 30.762 9.121 0.417 -0.469 CAJ 1T9 2 1T9 CAK CAK C 0 1 N N N -21.941 -2.264 30.262 8.008 0.532 0.575 CAK 1T9 3 1T9 CAL CAL C 0 1 N N N -21.785 -3.287 31.389 6.724 1.018 -0.100 CAL 1T9 4 1T9 CAM CAM C 0 1 N N N -21.215 -4.589 30.822 5.611 1.133 0.944 CAM 1T9 5 1T9 CAN CAN C 0 1 N N N -21.293 -5.687 31.884 4.327 1.620 0.269 CAN 1T9 6 1T9 CAO CAO C 0 1 N N N -20.582 -6.942 31.375 3.215 1.735 1.313 CAO 1T9 7 1T9 CAP CAP C 0 1 N N N -19.460 -7.322 32.343 1.931 2.222 0.638 CAP 1T9 8 1T9 CAQ CAQ C 0 1 N N N -20.066 -7.889 33.629 0.818 2.337 1.682 CAQ 1T9 9 1T9 CAE CAE C 0 1 N N N -19.105 -7.650 34.795 -0.447 2.816 1.017 CAE 1T9 10 1T9 CAD CAD C 0 1 N N N -19.745 -7.709 36.183 -1.552 2.122 1.135 CAD 1T9 11 1T9 CAC CAC C 0 1 N N R -18.784 -7.469 37.349 -2.817 2.601 0.470 CAC 1T9 12 1T9 OAR OAR O 0 1 N N N -19.258 -6.378 38.143 -2.532 3.759 -0.318 OAR 1T9 13 1T9 CAB CAB C 0 1 N N S -18.702 -8.731 38.211 -3.370 1.495 -0.431 CAB 1T9 14 1T9 CAA CAA C 0 1 N N N -17.801 -8.467 39.419 -4.667 1.973 -1.087 CAA 1T9 15 1T9 OBB OBB O 0 1 N N N -18.069 -7.162 39.940 -5.589 2.385 -0.076 OBB 1T9 16 1T9 PAX PAX P 0 1 N N N -16.966 -6.415 40.857 -7.061 2.947 -0.408 PAX 1T9 17 1T9 OAY OAY O 0 1 N N N -16.691 -4.996 40.130 -7.788 1.964 -1.241 OAY 1T9 18 1T9 OAZ OAZ O 0 1 N N N -15.603 -7.266 40.668 -7.866 3.188 0.965 OAZ 1T9 19 1T9 OBA OBA O 0 1 N N N -17.378 -6.277 42.272 -6.935 4.339 -1.208 OBA 1T9 20 1T9 NAW NAW N 0 1 N N N -18.145 -9.834 37.415 -3.641 0.301 0.373 NAW 1T9 21 1T9 CAU CAU C 0 1 N N N -18.358 -11.118 37.734 -3.644 -0.915 -0.207 CAU 1T9 22 1T9 OAV OAV O 0 1 N N N -19.025 -11.485 38.701 -3.422 -1.021 -1.394 OAV 1T9 23 1T9 CAT CAT C 0 1 N N N -17.704 -12.134 36.796 -3.923 -2.144 0.620 CAT 1T9 24 1T9 CBC CBC C 0 1 N N N -18.779 -12.806 35.940 -3.867 -3.384 -0.274 CBC 1T9 25 1T9 CBD CBD C 0 1 N N N -18.706 -12.264 34.511 -4.150 -4.632 0.565 CBD 1T9 26 1T9 CBE CBE C 0 1 N N N -19.636 -13.078 33.609 -4.094 -5.872 -0.329 CBE 1T9 27 1T9 CBF CBF C 0 1 N N N -20.943 -12.312 33.399 -4.377 -7.119 0.511 CBF 1T9 28 1T9 CBG CBG C 0 1 N N N -22.128 -13.227 33.715 -4.320 -8.359 -0.383 CBG 1T9 29 1T9 CBH CBH C 0 1 N N N -22.616 -13.894 32.427 -4.604 -9.607 0.456 CBH 1T9 30 1T9 H1 H1 H 0 1 N N N -24.489 -1.214 29.433 10.702 0.641 0.977 H1 1T9 31 1T9 H2 H2 H 0 1 N N N -24.007 0.466 29.849 10.230 -1.045 0.659 H2 1T9 32 1T9 H4 H4 H 0 1 N N N -22.091 -0.281 31.109 9.296 1.393 -0.922 H4 1T9 33 1T9 H5 H5 H 0 1 N N N -23.409 -1.401 31.594 8.824 -0.294 -1.240 H5 1T9 34 1T9 H6 H6 H 0 1 N N N -22.453 -2.733 29.409 7.833 -0.444 1.028 H6 1T9 35 1T9 H7 H7 H 0 1 N N N -20.948 -1.913 29.945 8.305 1.243 1.346 H7 1T9 36 1T9 H8 H8 H 0 1 N N N -21.101 -2.889 32.153 6.899 1.994 -0.553 H8 1T9 37 1T9 H9 H9 H 0 1 N N N -22.767 -3.484 31.844 6.427 0.308 -0.871 H9 1T9 38 1T9 H10 H10 H 0 1 N N N -21.798 -4.891 29.940 5.436 0.158 1.397 H10 1T9 39 1T9 H11 H11 H 0 1 N N N -20.165 -4.434 30.532 5.909 1.844 1.715 H11 1T9 40 1T9 H12 H12 H 0 1 N N N -20.806 -5.339 32.807 4.502 2.596 -0.184 H12 1T9 41 1T9 H13 H13 H 0 1 N N N -22.347 -5.922 32.091 4.030 0.909 -0.502 H13 1T9 42 1T9 H14 H14 H 0 1 N N N -21.303 -7.770 31.307 3.040 0.759 1.766 H14 1T9 43 1T9 H15 H15 H 0 1 N N N -20.156 -6.744 30.380 3.512 2.446 2.084 H15 1T9 44 1T9 H16 H16 H 0 1 N N N -18.814 -8.081 31.876 2.106 3.197 0.184 H16 1T9 45 1T9 H17 H17 H 0 1 N N N -18.863 -6.429 32.581 1.633 1.511 -0.133 H17 1T9 46 1T9 H18 H18 H 0 1 N N N -21.024 -7.388 33.835 0.643 1.361 2.135 H18 1T9 47 1T9 H19 H19 H 0 1 N N N -20.235 -8.969 33.509 1.115 3.047 2.453 H19 1T9 48 1T9 H20 H20 H 0 1 N N N -18.053 -7.454 34.649 -0.442 3.731 0.444 H20 1T9 49 1T9 H21 H21 H 0 1 N N N -20.797 -7.905 36.329 -1.557 1.207 1.708 H21 1T9 50 1T9 H22 H22 H 0 1 N N N -17.785 -7.244 36.948 -3.555 2.853 1.232 H22 1T9 51 1T9 H23 H23 H 0 1 N N N -18.661 -6.230 38.867 -1.945 3.590 -1.068 H23 1T9 52 1T9 H24 H24 H 0 1 N N N -19.710 -8.994 38.563 -2.639 1.255 -1.202 H24 1T9 53 1T9 H25 H25 H 0 1 N N N -18.000 -9.220 40.196 -4.451 2.814 -1.747 H25 1T9 54 1T9 H26 H26 H 0 1 N N N -16.747 -8.529 39.110 -5.102 1.159 -1.667 H26 1T9 55 1T9 H27 H27 H 0 1 N N N -14.970 -6.748 40.185 -8.762 3.528 0.841 H27 1T9 56 1T9 H28 H28 H 0 1 N N N -17.408 -5.357 42.505 -6.468 5.032 -0.721 H28 1T9 57 1T9 H29 H29 H 0 1 N N N -17.590 -9.620 36.611 -3.819 0.386 1.323 H29 1T9 58 1T9 H30 H30 H 0 1 N N N -17.179 -12.897 37.390 -3.174 -2.230 1.408 H30 1T9 59 1T9 H31 H31 H 0 1 N N N -16.984 -11.619 36.143 -4.914 -2.064 1.068 H31 1T9 60 1T9 H32 H32 H 0 1 N N N -19.772 -12.592 36.363 -4.615 -3.299 -1.062 H32 1T9 61 1T9 H33 H33 H 0 1 N N N -18.612 -13.893 35.929 -2.876 -3.465 -0.722 H33 1T9 62 1T9 H34 H34 H 0 1 N N N -17.673 -12.344 34.141 -3.401 -4.717 1.353 H34 1T9 63 1T9 H35 H35 H 0 1 N N N -19.018 -11.209 34.503 -5.141 -4.551 1.013 H35 1T9 64 1T9 H36 H36 H 0 1 N N N -19.851 -14.047 34.083 -4.842 -5.786 -1.116 H36 1T9 65 1T9 H37 H37 H 0 1 N N N -19.149 -13.246 32.637 -3.103 -5.952 -0.776 H37 1T9 66 1T9 H38 H38 H 0 1 N N N -20.967 -11.438 34.066 -3.628 -7.205 1.298 H38 1T9 67 1T9 H39 H39 H 0 1 N N N -21.007 -11.977 32.353 -5.367 -7.039 0.958 H39 1T9 68 1T9 H40 H40 H 0 1 N N N -22.944 -12.632 34.152 -5.069 -8.274 -1.171 H40 1T9 69 1T9 H41 H41 H 0 1 N N N -21.813 -14.000 34.432 -3.330 -8.440 -0.831 H41 1T9 70 1T9 H42 H42 H 0 1 N N N -23.468 -14.552 32.654 -5.594 -9.526 0.904 H42 1T9 71 1T9 H43 H43 H 0 1 N N N -22.931 -13.121 31.710 -4.563 -10.490 -0.181 H43 1T9 72 1T9 H44 H44 H 0 1 N N N -21.800 -14.489 31.990 -3.855 -9.692 1.244 H44 1T9 73 1T9 C1 C1 C 0 1 N N N ? ? ? 11.518 -0.184 -0.838 C1 1T9 74 1T9 C2 C2 C 0 1 N N N ? ? ? 12.802 -0.671 -0.163 C2 1T9 75 1T9 C3 C3 C 0 1 N N N ? ? ? 13.914 -0.786 -1.207 C3 1T9 76 1T9 C4 C4 C 0 1 N N N ? ? ? 15.198 -1.273 -0.532 C4 1T9 77 1T9 H3 H3 H 0 1 N N N ? ? ? 11.220 -0.896 -1.609 H3 1T9 78 1T9 H45 H45 H 0 1 N N N ? ? ? 11.693 0.791 -1.291 H45 1T9 79 1T9 H46 H46 H 0 1 N N N ? ? ? 13.099 0.040 0.608 H46 1T9 80 1T9 H47 H47 H 0 1 N N N ? ? ? 12.627 -1.647 0.290 H47 1T9 81 1T9 H48 H48 H 0 1 N N N ? ? ? 13.617 -1.497 -1.978 H48 1T9 82 1T9 H49 H49 H 0 1 N N N ? ? ? 14.089 0.190 -1.660 H49 1T9 83 1T9 H50 H50 H 0 1 N N N ? ? ? 15.496 -0.562 0.239 H50 1T9 84 1T9 H51 H51 H 0 1 N N N ? ? ? 15.023 -2.248 -0.079 H51 1T9 85 1T9 H52 H52 H 0 1 N N N ? ? ? 15.991 -1.355 -1.276 H52 1T9 86 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1T9 CAI CAJ SING N N 1 1T9 CAK CAJ SING N N 2 1T9 CAK CAL SING N N 3 1T9 CAM CAL SING N N 4 1T9 CAM CAN SING N N 5 1T9 CAO CAN SING N N 6 1T9 CAO CAP SING N N 7 1T9 CAP CAQ SING N N 8 1T9 CBH CBG SING N N 9 1T9 CBF CBE SING N N 10 1T9 CBF CBG SING N N 11 1T9 CBE CBD SING N N 12 1T9 CAQ CAE SING N N 13 1T9 CBD CBC SING N N 14 1T9 CAE CAD DOUB N E 15 1T9 CBC CAT SING N N 16 1T9 CAD CAC SING N N 17 1T9 CAT CAU SING N N 18 1T9 CAC OAR SING N N 19 1T9 CAC CAB SING N N 20 1T9 NAW CAU SING N N 21 1T9 NAW CAB SING N N 22 1T9 CAU OAV DOUB N N 23 1T9 CAB CAA SING N N 24 1T9 CAA OBB SING N N 25 1T9 OBB PAX SING N N 26 1T9 OAY PAX DOUB N N 27 1T9 OAZ PAX SING N N 28 1T9 PAX OBA SING N N 29 1T9 CAI H1 SING N N 30 1T9 CAI H2 SING N N 31 1T9 CAJ H4 SING N N 32 1T9 CAJ H5 SING N N 33 1T9 CAK H6 SING N N 34 1T9 CAK H7 SING N N 35 1T9 CAL H8 SING N N 36 1T9 CAL H9 SING N N 37 1T9 CAM H10 SING N N 38 1T9 CAM H11 SING N N 39 1T9 CAN H12 SING N N 40 1T9 CAN H13 SING N N 41 1T9 CAO H14 SING N N 42 1T9 CAO H15 SING N N 43 1T9 CAP H16 SING N N 44 1T9 CAP H17 SING N N 45 1T9 CAQ H18 SING N N 46 1T9 CAQ H19 SING N N 47 1T9 CAE H20 SING N N 48 1T9 CAD H21 SING N N 49 1T9 CAC H22 SING N N 50 1T9 OAR H23 SING N N 51 1T9 CAB H24 SING N N 52 1T9 CAA H25 SING N N 53 1T9 CAA H26 SING N N 54 1T9 OAZ H27 SING N N 55 1T9 OBA H28 SING N N 56 1T9 NAW H29 SING N N 57 1T9 CAT H30 SING N N 58 1T9 CAT H31 SING N N 59 1T9 CBC H32 SING N N 60 1T9 CBC H33 SING N N 61 1T9 CBD H34 SING N N 62 1T9 CBD H35 SING N N 63 1T9 CBE H36 SING N N 64 1T9 CBE H37 SING N N 65 1T9 CBF H38 SING N N 66 1T9 CBF H39 SING N N 67 1T9 CBG H40 SING N N 68 1T9 CBG H41 SING N N 69 1T9 CBH H42 SING N N 70 1T9 CBH H43 SING N N 71 1T9 CBH H44 SING N N 72 1T9 CAI C1 SING N N 73 1T9 C1 C2 SING N N 74 1T9 C2 C3 SING N N 75 1T9 C3 C4 SING N N 76 1T9 C1 H3 SING N N 77 1T9 C1 H45 SING N N 78 1T9 C2 H46 SING N N 79 1T9 C2 H47 SING N N 80 1T9 C3 H48 SING N N 81 1T9 C3 H49 SING N N 82 1T9 C4 H50 SING N N 83 1T9 C4 H51 SING N N 84 1T9 C4 H52 SING N N 85 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 1T9 SMILES ACDLabs 12.01 "O=C(NC(COP(=O)(O)O)C(O)/C=C/CCCCCCCCCCCCC)CCCCCCC" 1T9 InChI InChI 1.03 "InChI=1S/C26H52NO6P/c1-3-5-7-9-10-11-12-13-14-15-16-18-19-21-25(28)24(23-33-34(30,31)32)27-26(29)22-20-17-8-6-4-2/h19,21,24-25,28H,3-18,20,22-23H2,1-2H3,(H,27,29)(H2,30,31,32)/b21-19+/t24-,25+/m0/s1" 1T9 InChIKey InChI 1.03 VSSNYUXSRXINIP-WRBRXSDHSA-N 1T9 SMILES_CANONICAL CACTVS 3.370 "CCCCCCCCCCCCC\C=C\[C@@H](O)[C@H](CO[P](O)(O)=O)NC(=O)CCCCCCC" 1T9 SMILES CACTVS 3.370 "CCCCCCCCCCCCCC=C[CH](O)[CH](CO[P](O)(O)=O)NC(=O)CCCCCCC" 1T9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCCCCCCCCCCC/C=C/[C@H]([C@H](COP(=O)(O)O)NC(=O)CCCCCCC)O" 1T9 SMILES "OpenEye OEToolkits" 1.7.6 "CCCCCCCCCCCCCC=CC(C(COP(=O)(O)O)NC(=O)CCCCCCC)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1T9 "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,3R,4E)-3-hydroxy-2-(octanoylamino)octadec-4-en-1-yl dihydrogen phosphate" 1T9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(E,2S,3R)-2-(octanoylamino)-3-oxidanyl-octadec-4-enyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 1T9 "Create component" 2013-05-28 RCSB 1T9 "Initial release" 2013-07-17 RCSB #