data_24M # _chem_comp.id 24M _chem_comp.name "(1R,2R)-2-[(1S,2S)-2-amino-1-hydroxy-4-methylpentyl]cyclopentanecarboxylic acid" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H23 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-02-15 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 229.316 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 24M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1YM4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 24M N N1 N 0 1 N N N Y Y N 29.606 5.986 9.635 -1.594 1.293 0.873 N1 24M 1 24M CA C3 C 0 1 N N S Y N N 30.869 5.275 9.509 -1.539 -0.023 0.223 C3 24M 2 24M C5 C5 C 0 1 N N S Y N N 31.095 4.690 8.095 -0.266 -0.123 -0.621 C5 24M 3 24M O7 O7 O 0 1 N N N N N N 30.088 3.735 7.743 -0.275 0.901 -1.618 O7 24M 4 24M C9 C9 C 0 1 N N R Y N N 31.139 5.759 7.024 0.958 0.053 0.280 C9 24M 5 24M C11 C11 C 0 1 N N R Y N N 31.675 5.019 5.756 2.246 -0.045 -0.556 C11 24M 6 24M C13 C13 C 0 1 N N N N N N 30.820 5.483 4.582 2.976 1.305 -0.401 C13 24M 7 24M C16 C16 C 0 1 N N N N N N 29.450 5.841 5.184 2.442 1.874 0.937 C16 24M 8 24M C19 C19 C 0 1 N N N N N N 29.689 6.185 6.682 0.950 1.459 0.914 C19 24M 9 24M C C22 C 0 1 N N N Y N Y 33.146 5.288 5.536 3.113 -1.163 -0.039 C22 24M 10 24M O O23 O 0 1 N N N Y N Y 33.608 6.391 5.778 2.749 -1.824 0.905 O23 24M 11 24M C36 C36 C 0 1 N N N N N N 30.951 4.170 10.595 -2.763 -0.199 -0.678 C36 24M 12 24M C39 C39 C 0 1 N N N N N N 30.928 4.845 11.980 -4.029 -0.228 0.182 C39 24M 13 24M C41 C41 C 0 1 N N N N N N 32.286 5.539 12.234 -5.260 -0.257 -0.725 C41 24M 14 24M C45 C45 C 0 1 N N N N N N 30.667 3.800 13.091 -4.016 -1.477 1.066 C45 24M 15 24M H HN1 H 0 1 N N N Y Y N 29.514 6.341 10.565 -1.712 2.028 0.192 HN1 24M 16 24M HA H3 H 0 1 N N N Y N N 31.679 6.003 9.663 -1.532 -0.804 0.984 H3 24M 17 24M H5 H5 H 0 1 N N N Y N N 32.075 4.192 8.142 -0.226 -1.099 -1.103 H5 24M 18 24M HO7 HO7 H 0 1 N N N N N N 30.260 3.399 6.871 -0.311 1.798 -1.260 HO7 24M 19 24M H9 H9 H 0 1 N N N Y N N 31.737 6.628 7.336 0.960 -0.709 1.059 H9 24M 20 24M H11 H11 H 0 1 N N N Y N N 31.596 3.928 5.875 1.999 -0.218 -1.604 H11 24M 21 24M H131 H131 H 0 0 N N N N N N 31.272 6.358 4.092 4.054 1.152 -0.348 H131 24M 22 24M H132 H132 H 0 0 N N N N N N 30.720 4.684 3.832 2.724 1.972 -1.226 H132 24M 23 24M H161 H161 H 0 0 N N N N N N 29.016 6.704 4.658 2.957 1.418 1.783 H161 24M 24 24M H162 H162 H 0 0 N N N N N N 28.759 4.990 5.093 2.541 2.959 0.963 H162 24M 25 24M H191 H191 H 0 0 N N N N N N 28.973 5.642 7.316 0.371 2.151 0.302 H191 24M 26 24M H192 H192 H 0 0 N N N N N N 29.560 7.264 6.850 0.549 1.419 1.927 H192 24M 27 24M H361 H361 H 0 0 N N N N N N 30.094 3.488 10.498 -2.820 0.633 -1.380 H361 24M 28 24M H362 H362 H 0 0 N N N N N N 31.882 3.597 10.475 -2.677 -1.135 -1.229 H362 24M 29 24M H39 H39 H 0 1 N N N N N N 30.117 5.588 11.999 -4.061 0.661 0.811 H39 24M 30 24M H411 H411 H 0 0 N N N N N N 32.272 6.022 13.222 -5.224 -1.143 -1.360 H411 24M 31 24M H412 H412 H 0 0 N N N N N N 33.092 4.791 12.203 -6.162 -0.286 -0.113 H412 24M 32 24M H413 H413 H 0 0 N N N N N N 32.460 6.298 11.457 -5.274 0.637 -1.349 H413 24M 33 24M H451 H451 H 0 0 N N N N N N 30.654 4.301 14.070 -3.139 -1.457 1.712 H451 24M 34 24M H452 H452 H 0 0 N N N N N N 29.696 3.313 12.916 -4.918 -1.498 1.678 H452 24M 35 24M H453 H453 H 0 0 N N N N N N 31.465 3.043 13.077 -3.984 -2.367 0.437 H453 24M 36 24M H2 H2 H 0 1 N Y N Y Y N 29.585 6.746 8.985 -2.325 1.323 1.567 H2 24M 37 24M OXT OXT O 0 1 N Y N Y N Y ? ? ? 4.291 -1.425 -0.626 OXT 24M 38 24M HXT HXT H 0 1 N Y N Y N Y ? ? ? 4.813 -2.152 -0.259 HXT 24M 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 24M N CA SING N N 1 24M N H SING N N 2 24M CA C5 SING N N 3 24M CA C36 SING N N 4 24M CA HA SING N N 5 24M C5 O7 SING N N 6 24M C5 C9 SING N N 7 24M C5 H5 SING N N 8 24M O7 HO7 SING N N 9 24M C9 C11 SING N N 10 24M C9 C19 SING N N 11 24M C9 H9 SING N N 12 24M C11 C13 SING N N 13 24M C11 C SING N N 14 24M C11 H11 SING N N 15 24M C13 C16 SING N N 16 24M C13 H131 SING N N 17 24M C13 H132 SING N N 18 24M C16 C19 SING N N 19 24M C16 H161 SING N N 20 24M C16 H162 SING N N 21 24M C19 H191 SING N N 22 24M C19 H192 SING N N 23 24M C O DOUB N N 24 24M C36 C39 SING N N 25 24M C36 H361 SING N N 26 24M C36 H362 SING N N 27 24M C39 C41 SING N N 28 24M C39 C45 SING N N 29 24M C39 H39 SING N N 30 24M C41 H411 SING N N 31 24M C41 H412 SING N N 32 24M C41 H413 SING N N 33 24M C45 H451 SING N N 34 24M C45 H452 SING N N 35 24M C45 H453 SING N N 36 24M N H2 SING N N 37 24M C OXT SING N N 38 24M OXT HXT SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 24M SMILES ACDLabs 12.01 "O=C(O)C1CCCC1C(O)C(N)CC(C)C" 24M SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@H](N)[C@@H](O)[C@@H]1CCC[C@H]1C(O)=O" 24M SMILES CACTVS 3.370 "CC(C)C[CH](N)[CH](O)[CH]1CCC[CH]1C(O)=O" 24M SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(C)C[C@@H]([C@H]([C@@H]1CCC[C@H]1C(=O)O)O)N" 24M SMILES "OpenEye OEToolkits" 1.7.0 "CC(C)CC(C(C1CCCC1C(=O)O)O)N" 24M InChI InChI 1.03 "InChI=1S/C12H23NO3/c1-7(2)6-10(13)11(14)8-4-3-5-9(8)12(15)16/h7-11,14H,3-6,13H2,1-2H3,(H,15,16)/t8-,9-,10+,11+/m1/s1" 24M InChIKey InChI 1.03 YPQLLEPHYDICGQ-ZNSHCXBVSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 24M "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2R)-2-[(1S,2S)-2-amino-1-hydroxy-4-methylpentyl]cyclopentanecarboxylic acid" 24M "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(1R,2R)-2-[(1S,2S)-2-azanyl-1-hydroxy-4-methyl-pentyl]cyclopentane-1-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 24M "Create component" 2011-02-15 RCSB 24M "Modify descriptor" 2011-06-04 RCSB 24M "Modify backbone" 2023-11-03 PDBE #