data_2VM # _chem_comp.id 2VM _chem_comp.name "(2R)-6-bromo-9-(2-{[(1S)-1-carboxy-2-phenylethyl]amino}-2-oxoethyl)-2,3,4,9-tetrahydro-1H-carbazole-2-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H23 Br N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-02-25 _chem_comp.pdbx_modified_date 2014-02-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 499.354 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 2VM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4PNW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 2VM CAM CAM C 0 1 N N N 39.777 11.991 45.649 3.487 2.494 -0.374 CAM 2VM 1 2VM CAL CAL C 0 1 N N N 40.251 13.339 45.085 2.759 3.820 -0.623 CAL 2VM 2 2VM CAK CAK C 0 1 N N R 40.922 14.098 46.222 1.873 4.146 0.583 CAK 2VM 3 2VM CBD CBD C 0 1 N N N 41.764 15.271 45.662 1.351 5.554 0.457 CBD 2VM 4 2VM OBF OBF O 0 1 N N N 42.679 14.979 44.856 0.160 5.754 0.410 OBF 2VM 5 2VM OBE OBE O 0 1 N N N 41.510 16.428 46.067 2.208 6.585 0.396 OBE 2VM 6 2VM CAJ CAJ C 0 1 N N N 39.844 14.566 47.160 0.696 3.166 0.630 CAJ 2VM 7 2VM CAH CAH C 0 1 Y N N 38.969 13.481 47.449 1.235 1.760 0.513 CAH 2VM 8 2VM CAI CAI C 0 1 Y N N 38.923 12.303 46.758 2.476 1.467 0.067 CAI 2VM 9 2VM CAE CAE C 0 1 Y N N 37.971 11.539 47.323 2.612 0.025 0.105 CAE 2VM 10 2VM CAF CAF C 0 1 Y N N 37.537 10.298 47.028 3.660 -0.837 -0.232 CAF 2VM 11 2VM CAA CAA C 0 1 Y N N 36.516 9.706 47.768 3.432 -2.191 -0.063 CAA 2VM 12 2VM BR BR BR 0 0 N N N 35.817 7.963 47.437 4.806 -3.415 -0.499 BR 2VM 13 2VM CAB CAB C 0 1 Y N N 35.979 10.427 48.816 2.226 -2.677 0.417 CAB 2VM 14 2VM CAC CAC C 0 1 Y N N 36.454 11.697 49.092 1.176 -1.841 0.756 CAC 2VM 15 2VM CAD CAD C 0 1 Y N N 37.433 12.228 48.343 1.378 -0.472 0.596 CAD 2VM 16 2VM NAG NAG N 0 1 Y N N 38.035 13.417 48.417 0.571 0.604 0.830 NAG 2VM 17 2VM CAO CAO C 0 1 N N N 37.696 14.481 49.458 -0.799 0.534 1.345 CAO 2VM 18 2VM CAP CAP C 0 1 N N N 36.945 15.679 48.838 -1.764 0.430 0.192 CAP 2VM 19 2VM OAQ OAQ O 0 1 N N N 37.171 16.820 49.223 -1.348 0.415 -0.948 OAQ 2VM 20 2VM N N N 0 1 N N N 36.038 15.390 47.896 -3.089 0.352 0.426 N 2VM 21 2VM CA CA C 0 1 N N S 35.249 16.414 47.158 -4.027 0.251 -0.694 CA 2VM 22 2VM C C C 0 1 N N N 33.931 16.640 47.885 -4.345 1.631 -1.209 C 2VM 23 2VM OXT OXT O 0 1 N N N 33.275 15.629 48.209 -5.189 1.784 -2.241 OXT 2VM 24 2VM O O O 0 1 N N N 33.627 17.823 48.123 -3.841 2.600 -0.693 O 2VM 25 2VM CB CB C 0 1 N N N 35.038 15.821 45.787 -5.315 -0.427 -0.222 CB 2VM 26 2VM CG CG C 0 1 Y N N 35.938 16.182 44.777 -5.016 -1.849 0.178 CG 2VM 27 2VM CD1 CD1 C 0 1 Y N N 37.249 16.576 45.079 -4.659 -2.140 1.481 CD1 2VM 28 2VM CE1 CE1 C 0 1 Y N N 38.157 16.864 44.068 -4.385 -3.444 1.848 CE1 2VM 29 2VM CZ CZ C 0 1 Y N N 37.765 16.730 42.744 -4.468 -4.458 0.911 CZ 2VM 30 2VM CE2 CE2 C 0 1 Y N N 36.474 16.310 42.433 -4.826 -4.167 -0.392 CE2 2VM 31 2VM CD2 CD2 C 0 1 Y N N 35.565 16.021 43.447 -5.106 -2.863 -0.757 CD2 2VM 32 2VM H1 H1 H 0 1 N N N 39.220 11.431 44.883 3.968 2.162 -1.294 H1 2VM 33 2VM H2 H2 H 0 1 N N N 40.637 11.394 45.986 4.238 2.626 0.405 H2 2VM 34 2VM H3 H3 H 0 1 N N N 40.969 13.173 44.268 3.491 4.616 -0.762 H3 2VM 35 2VM H4 H4 H 0 1 N N N 39.391 13.911 44.707 2.141 3.734 -1.516 H4 2VM 36 2VM H5 H5 H 0 1 N N N 41.593 13.412 46.759 2.458 4.056 1.498 H5 2VM 37 2VM H6 H6 H 0 1 N N N 42.115 17.043 45.670 1.826 7.470 0.315 H6 2VM 38 2VM H7 H7 H 0 1 N N N 40.300 14.929 48.093 0.165 3.277 1.575 H7 2VM 39 2VM H8 H8 H 0 1 N N N 39.275 15.381 46.689 0.018 3.368 -0.199 H8 2VM 40 2VM H9 H9 H 0 1 N N N 37.986 9.756 46.209 4.602 -0.464 -0.607 H9 2VM 41 2VM H10 H10 H 0 1 N N N 35.190 10.001 49.419 2.101 -3.744 0.529 H10 2VM 42 2VM H11 H11 H 0 1 N N N 36.036 12.262 49.912 0.241 -2.234 1.128 H11 2VM 43 2VM H12 H12 H 0 1 N N N 37.062 14.028 50.235 -0.902 -0.342 1.985 H12 2VM 44 2VM H13 H13 H 0 1 N N N 38.630 14.844 49.912 -1.018 1.433 1.921 H13 2VM 45 2VM H14 H14 H 0 1 N N N 35.881 14.427 47.675 -3.421 0.363 1.338 H14 2VM 46 2VM H15 H15 H 0 1 N N N 35.809 17.358 47.085 -3.577 -0.340 -1.492 H15 2VM 47 2VM H16 H16 H 0 1 N N N 32.491 15.895 48.675 -5.363 2.688 -2.536 H16 2VM 48 2VM H17 H17 H 0 1 N N N 34.033 16.116 45.452 -5.717 0.114 0.634 H17 2VM 49 2VM H18 H18 H 0 1 N N N 35.083 14.727 45.892 -6.045 -0.423 -1.031 H18 2VM 50 2VM H19 H19 H 0 1 N N N 37.557 16.657 46.111 -4.594 -1.348 2.213 H19 2VM 51 2VM H20 H20 H 0 1 N N N 39.158 17.189 44.310 -4.106 -3.671 2.866 H20 2VM 52 2VM H21 H21 H 0 1 N N N 38.464 16.952 41.951 -4.254 -5.477 1.198 H21 2VM 53 2VM H22 H22 H 0 1 N N N 36.177 16.208 41.400 -4.890 -4.958 -1.124 H22 2VM 54 2VM H23 H23 H 0 1 N N N 34.573 15.673 43.201 -5.385 -2.636 -1.776 H23 2VM 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2VM CE2 CZ DOUB Y N 1 2VM CE2 CD2 SING Y N 2 2VM CZ CE1 SING Y N 3 2VM CD2 CG DOUB Y N 4 2VM CE1 CD1 DOUB Y N 5 2VM CG CD1 SING Y N 6 2VM CG CB SING N N 7 2VM OBF CBD DOUB N N 8 2VM CAL CAM SING N N 9 2VM CAL CAK SING N N 10 2VM CAM CAI SING N N 11 2VM CBD OBE SING N N 12 2VM CBD CAK SING N N 13 2VM CB CA SING N N 14 2VM CAK CAJ SING N N 15 2VM CAI CAE SING Y N 16 2VM CAI CAH DOUB Y N 17 2VM CAF CAE DOUB Y N 18 2VM CAF CAA SING Y N 19 2VM CA C SING N N 20 2VM CA N SING N N 21 2VM CAJ CAH SING N N 22 2VM CAE CAD SING Y N 23 2VM BR CAA SING N N 24 2VM CAH NAG SING Y N 25 2VM CAA CAB DOUB Y N 26 2VM C O DOUB N N 27 2VM C OXT SING N N 28 2VM N CAP SING N N 29 2VM CAD NAG SING Y N 30 2VM CAD CAC DOUB Y N 31 2VM NAG CAO SING N N 32 2VM CAB CAC SING Y N 33 2VM CAP OAQ DOUB N N 34 2VM CAP CAO SING N N 35 2VM CAM H1 SING N N 36 2VM CAM H2 SING N N 37 2VM CAL H3 SING N N 38 2VM CAL H4 SING N N 39 2VM CAK H5 SING N N 40 2VM OBE H6 SING N N 41 2VM CAJ H7 SING N N 42 2VM CAJ H8 SING N N 43 2VM CAF H9 SING N N 44 2VM CAB H10 SING N N 45 2VM CAC H11 SING N N 46 2VM CAO H12 SING N N 47 2VM CAO H13 SING N N 48 2VM N H14 SING N N 49 2VM CA H15 SING N N 50 2VM OXT H16 SING N N 51 2VM CB H17 SING N N 52 2VM CB H18 SING N N 53 2VM CD1 H19 SING N N 54 2VM CE1 H20 SING N N 55 2VM CZ H21 SING N N 56 2VM CE2 H22 SING N N 57 2VM CD2 H23 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 2VM SMILES ACDLabs 12.01 "O=C(O)C(NC(=O)Cn1c3c(c2c1CC(C(=O)O)CC2)cc(Br)cc3)Cc4ccccc4" 2VM InChI InChI 1.03 "InChI=1S/C24H23BrN2O5/c25-16-7-9-20-18(12-16)17-8-6-15(23(29)30)11-21(17)27(20)13-22(28)26-19(24(31)32)10-14-4-2-1-3-5-14/h1-5,7,9,12,15,19H,6,8,10-11,13H2,(H,26,28)(H,29,30)(H,31,32)/t15-,19+/m1/s1" 2VM InChIKey InChI 1.03 VVKCJZLVMZAHBK-BEFAXECRSA-N 2VM SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H]1CCc2c(C1)n(CC(=O)N[C@@H](Cc3ccccc3)C(O)=O)c4ccc(Br)cc24" 2VM SMILES CACTVS 3.385 "OC(=O)[CH]1CCc2c(C1)n(CC(=O)N[CH](Cc3ccccc3)C(O)=O)c4ccc(Br)cc24" 2VM SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C[C@@H](C(=O)O)NC(=O)Cn2c3ccc(cc3c4c2C[C@@H](CC4)C(=O)O)Br" 2VM SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CC(C(=O)O)NC(=O)Cn2c3ccc(cc3c4c2CC(CC4)C(=O)O)Br" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 2VM "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-6-bromo-9-(2-{[(1S)-1-carboxy-2-phenylethyl]amino}-2-oxoethyl)-2,3,4,9-tetrahydro-1H-carbazole-2-carboxylic acid" 2VM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R)-6-bromanyl-9-[2-oxidanylidene-2-[[(2S)-1-oxidanyl-1-oxidanylidene-3-phenyl-propan-2-yl]amino]ethyl]-1,2,3,4-tetrahydrocarbazole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 2VM "Create component" 2014-02-25 RCSB 2VM "Initial release" 2014-03-05 RCSB #