data_30K # _chem_comp.id 30K _chem_comp.name "(3Z)-5-[(1-ethylpiperidin-4-yl)amino]-3-[(5-methoxy-1H-benzimidazol-2-yl)(phenyl)methylidene]-1,3-dihydro-2H-indol-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H31 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-05-31 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 493.599 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 30K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4AW5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 30K O1 O1 O 0 1 N N N 9.244 -6.838 12.531 -2.658 2.505 0.149 O1 30K 1 30K C11 C11 C 0 1 N N N 10.306 -6.161 12.272 -1.482 2.192 0.198 C11 30K 2 30K N1 N1 N 0 1 N N N 10.414 -4.864 12.642 -0.443 3.037 0.303 N1 30K 3 30K C8 C8 C 0 1 Y N N 11.672 -4.422 12.265 0.767 2.350 0.334 C8 30K 4 30K C9 C9 C 0 1 Y N N 12.282 -3.169 12.389 2.081 2.796 0.431 C9 30K 5 30K C7 C7 C 0 1 Y N N 12.432 -5.494 11.591 0.517 0.973 0.245 C7 30K 6 30K C6 C6 C 0 1 Y N N 13.695 -5.290 11.095 1.571 0.064 0.256 C6 30K 7 30K C5 C5 C 0 1 Y N N 14.257 -4.031 11.257 2.874 0.525 0.355 C5 30K 8 30K N4 N4 N 0 1 N N N 15.458 -3.774 10.737 3.940 -0.382 0.366 N4 30K 9 30K C23 C23 C 0 1 N N N 16.029 -4.571 9.675 5.317 0.106 0.471 C23 30K 10 30K C24 C24 C 0 1 N N N 15.376 -4.178 8.332 6.203 -0.987 1.074 C24 30K 11 30K C25 C25 C 0 1 N N N 16.105 -4.726 7.096 7.651 -0.493 1.124 C25 30K 12 30K N5 N5 N 0 1 N N N 17.564 -4.603 7.152 8.105 -0.163 -0.233 N5 30K 13 30K C29 C29 C 0 1 N N N 18.169 -5.392 6.078 9.532 0.182 -0.242 C29 30K 14 30K C30 C30 C 0 1 N N N 19.678 -5.306 5.960 10.026 0.275 -1.687 C30 30K 15 30K C26 C26 C 0 1 N N N 18.077 -5.090 8.430 7.298 0.917 -0.814 C26 30K 16 30K C27 C27 C 0 1 N N N 17.522 -4.340 9.634 5.840 0.466 -0.923 C27 30K 17 30K C4 C4 C 0 1 Y N N 13.569 -2.972 11.888 3.123 1.891 0.440 C4 30K 18 30K C10 C10 C 0 1 N N N 11.540 -6.683 11.566 -0.950 0.820 0.161 C10 30K 19 30K C2 C2 C 0 1 N N N 11.918 -8.007 11.005 -1.671 -0.362 0.064 C2 30K 20 30K C1 C1 C 0 1 Y N N 13.252 -8.249 10.344 -0.964 -1.658 0.040 C1 30K 21 30K C12 C12 C 0 1 Y N N 13.359 -8.207 8.941 -1.135 -2.571 1.084 C12 30K 22 30K C13 C13 C 0 1 Y N N 14.583 -8.400 8.305 -0.472 -3.779 1.055 C13 30K 23 30K C14 C14 C 0 1 Y N N 15.704 -8.645 9.079 0.363 -4.089 -0.004 C14 30K 24 30K C15 C15 C 0 1 Y N N 15.606 -8.692 10.483 0.538 -3.190 -1.042 C15 30K 25 30K C16 C16 C 0 1 Y N N 14.379 -8.509 11.116 -0.124 -1.980 -1.030 C16 30K 26 30K C3 C3 C 0 1 Y N N 10.973 -9.136 10.972 -3.141 -0.324 -0.016 C3 30K 27 30K N2 N2 N 0 1 Y N N 11.370 -10.324 10.406 -3.870 0.767 -0.004 N2 30K 28 30K C17 C17 C 0 1 Y N N 10.325 -11.161 10.476 -5.173 0.444 -0.092 C17 30K 29 30K C19 C19 C 0 1 Y N N 10.027 -12.512 10.094 -6.351 1.203 -0.121 C19 30K 30 30K C18 C18 C 0 1 Y N N 9.261 -10.387 11.113 -5.254 -0.960 -0.165 C18 30K 31 30K N3 N3 N 0 1 Y N N 9.676 -9.161 11.396 -3.954 -1.423 -0.120 N3 30K 32 30K C22 C22 C 0 1 Y N N 7.956 -10.953 11.361 -6.492 -1.581 -0.263 C22 30K 33 30K C21 C21 C 0 1 Y N N 7.735 -12.281 10.976 -7.641 -0.821 -0.290 C21 30K 34 30K C20 C20 C 0 1 Y N N 8.763 -13.037 10.370 -7.571 0.569 -0.220 C20 30K 35 30K O2 O2 O 0 1 N N N 8.507 -14.327 9.962 -8.714 1.305 -0.248 O2 30K 36 30K C28 C28 C 0 1 N N N 8.222 -14.461 8.566 -9.945 0.587 -0.352 C28 30K 37 30K H1 H1 H 0 1 N N N 9.712 -4.322 13.104 -0.525 4.003 0.350 H1 30K 38 30K H9 H9 H 0 1 N N N 11.758 -2.357 12.871 2.286 3.854 0.500 H9 30K 39 30K H4 H4 H 0 1 N N N 14.041 -2.005 11.983 4.140 2.247 0.516 H4 30K 40 30K H6 H6 H 0 1 N N N 14.233 -6.082 10.596 1.374 -0.996 0.188 H6 30K 41 30K HA HA H 0 1 N N N 15.416 -2.837 10.390 3.766 -1.335 0.305 HA 30K 42 30K H23 H23 H 0 1 N N N 15.836 -5.638 9.861 5.343 0.989 1.110 H23 30K 43 30K H241 H241 H 0 0 N N N 14.345 -4.562 8.324 5.862 -1.217 2.083 H241 30K 44 30K H242 H242 H 0 0 N N N 15.359 -3.080 8.264 6.146 -1.884 0.456 H242 30K 45 30K H271 H271 H 0 0 N N N 17.732 -3.265 9.534 5.777 -0.408 -1.571 H271 30K 46 30K H272 H272 H 0 0 N N N 17.985 -4.720 10.557 5.239 1.273 -1.340 H272 30K 47 30K H251 H251 H 0 0 N N N 15.853 -5.792 6.992 7.710 0.395 1.753 H251 30K 48 30K H252 H252 H 0 0 N N N 15.747 -4.176 6.213 8.287 -1.275 1.540 H252 30K 49 30K H291 H291 H 0 0 N N N 17.904 -6.447 6.245 9.677 1.142 0.254 H291 30K 50 30K H292 H292 H 0 0 N N N 17.737 -5.051 5.126 10.096 -0.587 0.286 H292 30K 51 30K H261 H261 H 0 0 N N N 17.811 -6.153 8.529 7.359 1.799 -0.176 H261 30K 52 30K H262 H262 H 0 0 N N N 19.172 -4.984 8.429 7.677 1.160 -1.807 H262 30K 53 30K H301 H301 H 0 0 N N N 20.017 -5.936 5.124 9.462 1.045 -2.214 H301 30K 54 30K H302 H302 H 0 0 N N N 19.972 -4.262 5.776 11.085 0.532 -1.693 H302 30K 55 30K H303 H303 H 0 0 N N N 20.139 -5.657 6.895 9.882 -0.685 -2.182 H303 30K 56 30K H12 H12 H 0 1 N N N 12.476 -8.022 8.347 -1.786 -2.330 1.912 H12 30K 57 30K H16 H16 H 0 1 N N N 14.304 -8.568 12.192 0.010 -1.281 -1.843 H16 30K 58 30K H13 H13 H 0 1 N N N 14.656 -8.359 7.228 -0.603 -4.485 1.862 H13 30K 59 30K H14 H14 H 0 1 N N N 16.661 -8.801 8.603 0.880 -5.037 -0.022 H14 30K 60 30K H15 H15 H 0 1 N N N 16.491 -8.872 11.075 1.192 -3.438 -1.865 H15 30K 61 30K H3 H3 H 0 1 N N N 9.156 -8.421 11.824 -3.671 -2.350 -0.154 H3 30K 62 30K H19 H19 H 0 1 N N N 10.773 -13.116 9.598 -6.303 2.281 -0.066 H19 30K 63 30K H22 H22 H 0 1 N N N 7.176 -10.371 11.828 -6.555 -2.657 -0.319 H22 30K 64 30K H21 H21 H 0 1 N N N 6.768 -12.732 11.144 -8.603 -1.306 -0.366 H21 30K 65 30K H281 H281 H 0 0 N N N 8.031 -15.518 8.330 -9.950 0.004 -1.273 H281 30K 66 30K H282 H282 H 0 0 N N N 7.334 -13.863 8.314 -10.049 -0.082 0.503 H282 30K 67 30K H283 H283 H 0 0 N N N 9.082 -14.104 7.980 -10.777 1.291 -0.364 H283 30K 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 30K O1 C11 DOUB N N 1 30K C11 N1 SING N N 2 30K C11 C10 SING N N 3 30K N1 C8 SING N N 4 30K C8 C9 SING Y N 5 30K C8 C7 DOUB Y N 6 30K C9 C4 DOUB Y N 7 30K C7 C6 SING Y N 8 30K C7 C10 SING N N 9 30K C6 C5 DOUB Y N 10 30K C5 N4 SING N N 11 30K C5 C4 SING Y N 12 30K N4 C23 SING N N 13 30K C23 C24 SING N N 14 30K C23 C27 SING N N 15 30K C24 C25 SING N N 16 30K C25 N5 SING N N 17 30K N5 C29 SING N N 18 30K N5 C26 SING N N 19 30K C29 C30 SING N N 20 30K C26 C27 SING N N 21 30K C10 C2 DOUB N Z 22 30K C2 C1 SING N N 23 30K C2 C3 SING N N 24 30K C1 C12 SING Y N 25 30K C1 C16 DOUB Y N 26 30K C12 C13 DOUB Y N 27 30K C13 C14 SING Y N 28 30K C14 C15 DOUB Y N 29 30K C15 C16 SING Y N 30 30K C3 N2 DOUB Y N 31 30K C3 N3 SING Y N 32 30K N2 C17 SING Y N 33 30K C17 C19 SING Y N 34 30K C17 C18 DOUB Y N 35 30K C19 C20 DOUB Y N 36 30K C18 N3 SING Y N 37 30K C18 C22 SING Y N 38 30K C22 C21 DOUB Y N 39 30K C21 C20 SING Y N 40 30K C20 O2 SING N N 41 30K O2 C28 SING N N 42 30K N1 H1 SING N N 43 30K C9 H9 SING N N 44 30K C4 H4 SING N N 45 30K C6 H6 SING N N 46 30K N4 HA SING N N 47 30K C23 H23 SING N N 48 30K C24 H241 SING N N 49 30K C24 H242 SING N N 50 30K C27 H271 SING N N 51 30K C27 H272 SING N N 52 30K C25 H251 SING N N 53 30K C25 H252 SING N N 54 30K C29 H291 SING N N 55 30K C29 H292 SING N N 56 30K C26 H261 SING N N 57 30K C26 H262 SING N N 58 30K C30 H301 SING N N 59 30K C30 H302 SING N N 60 30K C30 H303 SING N N 61 30K C12 H12 SING N N 62 30K C16 H16 SING N N 63 30K C13 H13 SING N N 64 30K C14 H14 SING N N 65 30K C15 H15 SING N N 66 30K N3 H3 SING N N 67 30K C19 H19 SING N N 68 30K C22 H22 SING N N 69 30K C21 H21 SING N N 70 30K C28 H281 SING N N 71 30K C28 H282 SING N N 72 30K C28 H283 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 30K SMILES ACDLabs 12.01 "O=C6C(=C(/c1ccccc1)c3nc2cc(OC)ccc2n3)/c5cc(NC4CCN(CC)CC4)ccc5N6" 30K InChI InChI 1.03 "InChI=1S/C30H31N5O2/c1-3-35-15-13-20(14-16-35)31-21-9-11-24-23(17-21)28(30(36)34-24)27(19-7-5-4-6-8-19)29-32-25-12-10-22(37-2)18-26(25)33-29/h4-12,17-18,20,31H,3,13-16H2,1-2H3,(H,32,33)(H,34,36)/b28-27-" 30K InChIKey InChI 1.03 LETIJBVXDGOQFG-DQSJHHFOSA-N 30K SMILES_CANONICAL CACTVS 3.385 "CCN1CCC(CC1)Nc2ccc3NC(=O)\C(c3c2)=C(c4[nH]c5ccc(OC)cc5n4)\c6ccccc6" 30K SMILES CACTVS 3.385 "CCN1CCC(CC1)Nc2ccc3NC(=O)C(c3c2)=C(c4[nH]c5ccc(OC)cc5n4)c6ccccc6" 30K SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCN1CCC(CC1)Nc2ccc3c(c2)/C(=C(\c4ccccc4)/c5[nH]c6ccc(cc6n5)OC)/C(=O)N3" 30K SMILES "OpenEye OEToolkits" 1.9.2 "CCN1CCC(CC1)Nc2ccc3c(c2)C(=C(c4ccccc4)c5[nH]c6ccc(cc6n5)OC)C(=O)N3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 30K "SYSTEMATIC NAME" ACDLabs 12.01 "(3Z)-5-[(1-ethylpiperidin-4-yl)amino]-3-[(5-methoxy-1H-benzimidazol-2-yl)(phenyl)methylidene]-1,3-dihydro-2H-indol-2-one" 30K "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(3Z)-5-[(1-ethylpiperidin-4-yl)amino]-3-[(5-methoxy-1H-benzimidazol-2-yl)-phenyl-methylidene]-1H-indol-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 30K "Create component" 2012-05-31 EBI 30K "Modify descriptor" 2014-09-05 RCSB #