data_3BY # _chem_comp.id 3BY _chem_comp.name 1-methyl-L-proline _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H11 N O2" _chem_comp.mon_nstd_parent_comp_id PRO _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-07-23 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 129.157 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3BY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4QUP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3BY O O1 O 0 1 N N N Y N Y -23.525 123.288 384.521 1.395 -0.324 1.148 O1 3BY 1 3BY C C6 C 0 1 N N N Y N Y -24.599 122.687 384.672 1.347 0.228 0.075 C6 3BY 2 3BY OXT O O 0 1 N Y N Y N Y -25.369 122.747 385.746 2.480 0.618 -0.531 O 3BY 3 3BY CA C C 0 1 N N S Y N N -24.888 121.527 383.704 0.016 0.472 -0.588 C 3BY 4 3BY CB C1 C 0 1 N N N N N N -24.560 120.273 384.467 -0.806 1.481 0.241 C1 3BY 5 3BY CG C2 C 0 1 N N N N N N -24.349 119.201 383.460 -2.251 0.927 0.134 C2 3BY 6 3BY CD C3 C 0 1 N N N N N N -24.216 119.818 382.216 -2.001 -0.602 0.138 C3 3BY 7 3BY N N N 0 1 N N N Y Y N -23.974 121.261 382.636 -0.757 -0.783 -0.639 N 3BY 8 3BY CN C4 C 0 1 N N N N N N -22.555 121.349 383.035 0.031 -1.908 -0.116 C4 3BY 9 3BY HXT H1 H 0 1 N Y N Y N Y -24.973 123.324 386.389 3.309 0.437 -0.069 H1 3BY 10 3BY HA H2 H 0 1 N N N Y N N -25.937 121.538 383.374 0.169 0.857 -1.596 H2 3BY 11 3BY HB3 H3 H 0 1 N N N N N N -25.393 120.007 385.135 -0.473 1.489 1.279 H3 3BY 12 3BY HB2 H4 H 0 1 N N N N N N -23.646 120.419 385.061 -0.740 2.479 -0.192 H4 3BY 13 3BY HG3 H5 H 0 1 N N N N N N -25.212 118.519 383.451 -2.849 1.227 0.994 H5 3BY 14 3BY HG2 H6 H 0 1 N N N N N N -23.436 118.635 383.699 -2.723 1.244 -0.797 H6 3BY 15 3BY HD3 H7 H 0 1 N N N N N N -25.132 119.720 381.616 -1.868 -0.961 1.158 H7 3BY 16 3BY HD2 H8 H 0 1 N N N N N N -23.363 119.412 381.652 -2.829 -1.123 -0.344 H8 3BY 17 3BY HN1 H10 H 0 1 N N N N N N -22.325 122.378 383.350 -0.486 -2.843 -0.330 H10 3BY 18 3BY HN2 H11 H 0 1 N N N N N N -22.366 120.659 383.871 1.011 -1.917 -0.593 H11 3BY 19 3BY HN3 H12 H 0 1 N N N N N N -21.917 121.075 382.182 0.151 -1.797 0.961 H12 3BY 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3BY CD N SING N N 1 3BY CD CG SING N N 2 3BY N CN SING N N 3 3BY N CA SING N N 4 3BY CG CB SING N N 5 3BY CA CB SING N N 6 3BY CA C SING N N 7 3BY O C DOUB N N 8 3BY C OXT SING N N 9 3BY OXT HXT SING N N 10 3BY CA HA SING N N 11 3BY CB HB3 SING N N 12 3BY CB HB2 SING N N 13 3BY CG HG3 SING N N 14 3BY CG HG2 SING N N 15 3BY CD HD3 SING N N 16 3BY CD HD2 SING N N 17 3BY CN HN1 SING N N 18 3BY CN HN2 SING N N 19 3BY CN HN3 SING N N 20 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3BY SMILES ACDLabs 12.01 "O=C(O)C1CCCN1C" 3BY InChI InChI 1.03 "InChI=1S/C6H11NO2/c1-7-4-2-3-5(7)6(8)9/h5H,2-4H2,1H3,(H,8,9)/t5-/m0/s1" 3BY InChIKey InChI 1.03 CWLQUGTUXBXTLF-YFKPBYRVSA-N 3BY SMILES_CANONICAL CACTVS 3.385 "CN1CCC[C@H]1C(O)=O" 3BY SMILES CACTVS 3.385 "CN1CCC[CH]1C(O)=O" 3BY SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CN1CCC[C@H]1C(=O)O" 3BY SMILES "OpenEye OEToolkits" 1.7.6 "CN1CCCC1C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3BY "SYSTEMATIC NAME" ACDLabs 12.01 1-methyl-L-proline 3BY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-1-methylpyrrolidine-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3BY "Create component" 2014-07-23 RCSB 3BY "Initial release" 2015-07-15 RCSB 3BY "Other modification" 2015-10-05 RCSB 3BY "Modify backbone" 2023-11-03 PDBE #