data_3GE # _chem_comp.id 3GE _chem_comp.name "N-[(1E)-2-formyl-3-hydroxyprop-1-en-1-yl]-3-[(S)-sulfino]-D-valine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H15 N O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-08-15 _chem_comp.pdbx_modified_date 2024-05-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 265.284 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3GE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4R3B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3GE OAC OAC O 0 1 N N N N N N 9.187 34.186 6.202 5.112 0.412 -0.081 OAC 3GE 1 3GE CAI CAI C 0 1 N N N N N N 8.306 33.840 5.415 4.082 0.944 0.285 CAI 3GE 2 3GE CAN CAN C 0 1 N N N N N N 7.666 34.938 4.674 2.854 0.292 0.101 CAN 3GE 3 3GE CAK CAK C 0 1 N N N N N N 6.433 34.617 3.871 2.812 -1.066 -0.549 CAK 3GE 4 3GE OAG OAG O 0 1 N N N N N N 5.384 34.736 4.819 3.642 -1.971 0.182 OAG 3GE 5 3GE CAJ CAJ C 0 1 N N N N N N 8.147 36.202 4.760 1.706 0.885 0.509 CAJ 3GE 6 3GE N N N 0 1 N N N N N N 7.618 37.178 4.147 0.506 0.287 0.264 N 3GE 7 3GE CA CA C 0 1 N N S N N N 8.139 38.545 4.250 -0.739 0.963 0.634 CA 3GE 8 3GE C C C 0 1 N N N N N N 9.418 38.742 3.471 -1.147 1.905 -0.469 C 3GE 9 3GE O O O 0 1 N N N N N N 9.648 38.015 2.481 -0.723 1.743 -1.589 O 3GE 10 3GE OXT OXT O 0 1 N N N N N N 10.215 39.629 3.856 -1.980 2.925 -0.208 OXT 3GE 11 3GE CB CB C 0 1 N N N N N N 7.068 39.651 4.006 -1.840 -0.077 0.849 CB 3GE 12 3GE CG1 CG1 C 0 1 N N N N N N 7.455 40.626 2.901 -1.427 -1.033 1.970 CG1 3GE 13 3GE CG2 CG2 C 0 1 N N N N N N 6.972 40.420 5.315 -3.141 0.630 1.236 CG2 3GE 14 3GE SAP SAP S 0 1 N N N N N N 5.534 39.091 3.624 -2.094 -1.014 -0.683 SAP 3GE 15 3GE OAE OAE O 0 1 N N N N N N 5.065 38.157 4.610 -3.278 -1.909 -0.345 OAE 3GE 16 3GE OAF OAF O 0 1 N N N N N N 5.515 38.461 2.326 -1.031 -1.941 -0.852 OAF 3GE 17 3GE H1 H1 H 0 1 N Y N N N N 8.024 32.807 5.279 4.113 1.915 0.755 H1 3GE 18 3GE H3 H3 H 0 1 N N N N N N 6.302 35.334 3.047 1.786 -1.436 -0.552 H3 3GE 19 3GE H4 H4 H 0 1 N N N N N N 6.483 33.596 3.465 3.173 -0.989 -1.575 H4 3GE 20 3GE H5 H5 H 0 1 N N N N N N 4.553 34.549 4.398 3.662 -2.867 -0.181 H5 3GE 21 3GE H6 H6 H 0 1 N N N N N N 9.016 36.385 5.375 1.741 1.831 1.029 H6 3GE 22 3GE H7 H7 H 0 1 N N N N N N 8.427 38.669 5.304 -0.587 1.527 1.555 H7 3GE 23 3GE HXT H8 H 0 1 N N N N N N 10.976 39.640 3.287 -2.213 3.502 -0.948 HXT 3GE 24 3GE H9 H9 H 0 1 N N N N N N 8.459 41.028 3.101 -1.275 -0.470 2.891 H9 3GE 25 3GE H10 H10 H 0 1 N N N N N N 7.455 40.102 1.934 -2.211 -1.774 2.123 H10 3GE 26 3GE H11 H11 H 0 1 N N N N N N 6.729 41.452 2.870 -0.500 -1.537 1.694 H11 3GE 27 3GE H12 H12 H 0 1 N N N N N N 6.693 39.731 6.126 -3.436 1.311 0.438 H12 3GE 28 3GE H13 H13 H 0 1 N N N N N N 7.945 40.879 5.543 -3.926 -0.111 1.389 H13 3GE 29 3GE H14 H14 H 0 1 N N N N N N 6.208 41.206 5.223 -2.989 1.193 2.157 H14 3GE 30 3GE H20 H20 H 0 1 N N N N N N 6.668 37.218 4.456 0.477 -0.587 -0.156 H20 3GE 31 3GE H15 H15 H 0 1 N N N N N N 4.847 37.334 4.189 -3.552 -2.489 -1.068 H15 3GE 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3GE OAF SAP DOUB N N 1 3GE O C DOUB N N 2 3GE CG1 CB SING N N 3 3GE C OXT SING N N 4 3GE C CA SING N N 5 3GE SAP CB SING N N 6 3GE SAP OAE SING N N 7 3GE CAK CAN SING N N 8 3GE CAK OAG SING N N 9 3GE CB CA SING N N 10 3GE CB CG2 SING N N 11 3GE N CA SING N N 12 3GE N CAJ SING N N 13 3GE CAN CAJ DOUB N E 14 3GE CAN CAI SING N N 15 3GE CAI OAC DOUB N N 16 3GE CAI H1 SING N N 17 3GE CAK H3 SING N N 18 3GE CAK H4 SING N N 19 3GE OAG H5 SING N N 20 3GE CAJ H6 SING N N 21 3GE CA H7 SING N N 22 3GE OXT HXT SING N N 23 3GE CG1 H9 SING N N 24 3GE CG1 H10 SING N N 25 3GE CG1 H11 SING N N 26 3GE CG2 H12 SING N N 27 3GE CG2 H13 SING N N 28 3GE CG2 H14 SING N N 29 3GE N H20 SING N N 30 3GE OAE H15 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3GE SMILES ACDLabs 12.01 "O=S(O)C(C)(C)C(N\C=C(/CO)C=O)C(=O)O" 3GE InChI InChI 1.06 "InChI=1S/C9H15NO6S/c1-9(2,17(15)16)7(8(13)14)10-3-6(4-11)5-12/h3-4,7,10,12H,5H2,1-2H3,(H,13,14)(H,15,16)/b6-3-/t7-/m0/s1" 3GE InChIKey InChI 1.06 RSKLLQJITLFPCX-NFNQMPKISA-N 3GE SMILES_CANONICAL CACTVS 3.385 "CC(C)([C@@H](N/C=C(CO)/C=O)C(O)=O)[S](O)=O" 3GE SMILES CACTVS 3.385 "CC(C)([CH](NC=C(CO)C=O)C(O)=O)[S](O)=O" 3GE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)([C@H](C(=O)O)N/C=C(\CO)/C=O)S(=O)O" 3GE SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C(C(=O)O)NC=C(CO)C=O)S(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3GE "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(1E)-2-formyl-3-hydroxyprop-1-en-1-yl]-3-[(S)-sulfino]-D-valine" 3GE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[(~{E})-2-(hydroxymethyl)-3-oxidanylidene-prop-1-enyl]amino]-3-methyl-3-sulfino-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3GE "Create component" 2014-08-15 RCSB 3GE "Initial release" 2015-01-21 RCSB 3GE "Modify formula" 2024-05-07 RCSB 3GE "Modify coordinates" 2024-05-07 RCSB 3GE "Other modification" 2024-05-08 RCSB #