data_3I2 # _chem_comp.id 3I2 _chem_comp.name "D-3-deoxy-myo-inositol 1,4,6-trisphosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H15 O14 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[(1R,2S,3R,4R,5R)-2,5-bis(oxidanyl)-3,4-diphosphonooxy-cyclohexyl] dihydrogen phosphate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-12 _chem_comp.pdbx_modified_date 2024-02-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 404.096 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3I2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PPB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3I2 C1 C1 C 0 1 N N R N N N 11.751 28.000 85.501 0.891 1.123 -0.162 C1 3I2 1 3I2 C2 C2 C 0 1 N N R N N N 11.738 27.791 84.007 -0.077 2.127 0.468 C2 3I2 2 3I2 C3 C3 C 0 1 N N N N N N 10.348 28.070 83.459 -1.427 2.051 -0.248 C3 3I2 3 3I2 O2 O1 O 0 1 N N N N N N 12.711 28.647 83.408 -0.254 1.816 1.851 O2 3I2 4 3I2 P6 P1 P 0 1 N N N N N N 11.564 30.676 88.286 1.904 -2.428 0.216 P6 3I2 5 3I2 O26 O2 O 0 1 N N N N N N 11.302 30.267 89.718 0.765 -3.457 0.703 O26 3I2 6 3I2 O6 O3 O 0 1 N N N N N N 11.190 29.440 87.313 1.224 -1.228 -0.613 O6 3I2 7 3I2 O36 O4 O 0 1 N N N N N N 10.604 31.727 87.768 2.606 -1.877 1.396 O36 3I2 8 3I2 O16 O5 O 0 1 N N N N N N 13.015 30.999 88.009 2.958 -3.201 -0.724 O16 3I2 9 3I2 C4 C4 C 0 1 N N R N N N 9.840 29.446 83.846 -1.998 0.638 -0.112 C4 3I2 10 3I2 C5 C5 C 0 1 N N S N N N 9.831 29.615 85.358 -1.030 -0.366 -0.742 C5 3I2 11 3I2 C6 C6 C 0 1 N N R N N N 11.228 29.368 85.879 0.320 -0.290 -0.025 C6 3I2 12 3I2 O1 O6 O 0 1 N N N N N N 13.106 27.962 85.974 2.152 1.194 0.507 O1 3I2 13 3I2 O4 O7 O 0 1 N N N N N N 8.462 29.573 83.373 -3.259 0.568 -0.781 O4 3I2 14 3I2 O5 O8 O 0 1 N N N N N N 9.414 30.926 85.717 -1.564 -1.685 -0.614 O5 3I2 15 3I2 P1 P2 P 0 1 N N N N N N 13.741 26.592 86.563 3.523 1.572 -0.246 P1 3I2 16 3I2 O11 O9 O 0 1 N N N N N N 12.814 26.056 87.633 3.879 0.428 -1.321 O11 3I2 17 3I2 O21 O10 O 0 1 N N N N N N 13.782 25.698 85.337 3.363 2.869 -0.940 O21 3I2 18 3I2 O31 O11 O 0 1 N N N N N N 15.102 26.940 87.113 4.714 1.685 0.832 O31 3I2 19 3I2 P4 P3 P 0 1 N N N N N N 8.133 30.046 81.862 -4.631 0.189 -0.028 P4 3I2 20 3I2 O14 O12 O 0 1 N N N N N N 8.459 31.519 81.888 -4.550 -1.329 0.504 O14 3I2 21 3I2 O24 O13 O 0 1 N N N N N N 9.095 29.252 80.995 -4.834 1.103 1.118 O24 3I2 22 3I2 O34 O14 O 0 1 N N N N N N 6.689 29.759 81.515 -5.864 0.333 -1.054 O34 3I2 23 3I2 H1 H1 H 0 1 N N N N N N 11.145 27.223 85.990 1.025 1.360 -1.217 H1 3I2 24 3I2 H2 H2 H 0 1 N N N N N N 11.990 26.741 83.798 0.329 3.134 0.371 H2 3I2 25 3I2 H3 H3 H 0 1 N N N N N N 9.654 27.313 83.854 -2.117 2.767 0.200 H3 3I2 26 3I2 H4 H4 H 0 1 N N N N N N 10.380 28.001 82.362 -1.293 2.289 -1.304 H4 3I2 27 3I2 H5 H5 H 0 1 N N N N N N 13.569 28.452 83.767 -0.857 2.413 2.315 H5 3I2 28 3I2 H6 H6 H 0 1 N N N N N N 10.559 30.753 90.056 0.262 -3.858 -0.020 H6 3I2 29 3I2 H7 H7 H 0 1 N N N N N N 13.073 31.827 87.546 3.407 -3.938 -0.288 H7 3I2 30 3I2 H8 H8 H 0 1 N N N N N N 10.477 30.219 83.391 -2.133 0.401 0.943 H8 3I2 31 3I2 H9 H9 H 0 1 N N N N N N 9.151 28.868 85.794 -0.896 -0.128 -1.797 H9 3I2 32 3I2 H10 H10 H 0 1 N N N N N N 11.905 30.137 85.478 0.185 -0.527 1.030 H10 3I2 33 3I2 H11 H11 H 0 1 N N N N N N 9.880 31.205 86.497 -2.421 -1.806 -1.046 H11 3I2 34 3I2 H12 H12 H 0 1 N N N N N N 12.421 25.244 87.335 3.999 -0.451 -0.935 H12 3I2 35 3I2 H13 H13 H 0 1 N N N N N N 15.773 26.528 86.582 5.572 1.911 0.449 H13 3I2 36 3I2 H14 H14 H 0 1 N N N N N N 9.222 31.685 81.347 -4.417 -1.984 -0.195 H14 3I2 37 3I2 H15 H15 H 0 1 N N N N N N 6.653 29.125 80.808 -6.724 0.119 -0.667 H15 3I2 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3I2 O24 P4 DOUB N N 1 3I2 O34 P4 SING N N 2 3I2 P4 O14 SING N N 3 3I2 P4 O4 SING N N 4 3I2 O4 C4 SING N N 5 3I2 O2 C2 SING N N 6 3I2 C3 C4 SING N N 7 3I2 C3 C2 SING N N 8 3I2 C4 C5 SING N N 9 3I2 C2 C1 SING N N 10 3I2 O21 P1 DOUB N N 11 3I2 C5 O5 SING N N 12 3I2 C5 C6 SING N N 13 3I2 C1 C6 SING N N 14 3I2 C1 O1 SING N N 15 3I2 C6 O6 SING N N 16 3I2 O1 P1 SING N N 17 3I2 P1 O31 SING N N 18 3I2 P1 O11 SING N N 19 3I2 O6 P6 SING N N 20 3I2 O36 P6 DOUB N N 21 3I2 O16 P6 SING N N 22 3I2 P6 O26 SING N N 23 3I2 C1 H1 SING N N 24 3I2 C2 H2 SING N N 25 3I2 C3 H3 SING N N 26 3I2 C3 H4 SING N N 27 3I2 O2 H5 SING N N 28 3I2 O26 H6 SING N N 29 3I2 O16 H7 SING N N 30 3I2 C4 H8 SING N N 31 3I2 C5 H9 SING N N 32 3I2 C6 H10 SING N N 33 3I2 O5 H11 SING N N 34 3I2 O11 H12 SING N N 35 3I2 O31 H13 SING N N 36 3I2 O14 H14 SING N N 37 3I2 O34 H15 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3I2 InChI InChI 1.06 "InChI=1S/C6H15O14P3/c7-2-1-3(18-21(9,10)11)4(8)6(20-23(15,16)17)5(2)19-22(12,13)14/h2-8H,1H2,(H2,9,10,11)(H2,12,13,14)(H2,15,16,17)/t2-,3-,4+,5-,6-/m1/s1" 3I2 InChIKey InChI 1.06 GHYKQXTYUPPQMF-VFUOTHLCSA-N 3I2 SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1C[C@@H](O[P](O)(O)=O)[C@H](O)[C@@H](O[P](O)(O)=O)[C@@H]1O[P](O)(O)=O" 3I2 SMILES CACTVS 3.385 "O[CH]1C[CH](O[P](O)(O)=O)[CH](O)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O" 3I2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@H]([C@H]([C@@H]([C@H]([C@@H]1OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O" 3I2 SMILES "OpenEye OEToolkits" 2.0.7 "C1C(C(C(C(C1OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O" # _pdbx_chem_comp_identifier.comp_id 3I2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(1~{R},2~{S},3~{R},4~{R},5~{R})-2,5-bis(oxidanyl)-3,4-diphosphonooxy-cyclohexyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3I2 "Create component" 2023-07-12 PDBE 3I2 "Initial release" 2024-02-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 3I2 _pdbx_chem_comp_synonyms.name "[(1R,2S,3R,4R,5R)-2,5-bis(oxidanyl)-3,4-diphosphonooxy-cyclohexyl] dihydrogen phosphate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #