data_3X6 # _chem_comp.id 3X6 _chem_comp.name "(2E)-3-(3-chloro-5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}phenyl)prop-2-enenitrile" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H16 Cl N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-12-02 _chem_comp.pdbx_modified_date 2015-04-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 409.822 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3X6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4RW7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3X6 C10 C10 C 0 1 N N N 213.739 -32.014 32.119 5.530 0.230 -0.431 C10 3X6 1 3X6 C12 C12 C 0 1 N N N 212.712 -33.330 33.902 4.962 2.496 -0.375 C12 3X6 2 3X6 C13 C13 C 0 1 N N N 211.891 -32.164 34.245 3.808 2.214 -1.145 C13 3X6 3 3X6 C14 C14 C 0 1 N N N 212.027 -31.017 33.533 3.567 0.942 -1.526 C14 3X6 4 3X6 C00 C00 C 0 1 Y N N 216.188 -27.660 33.898 1.531 -3.086 1.267 C00 3X6 5 3X6 C01 C01 C 0 1 Y N N 217.234 -27.160 34.703 0.635 -3.600 2.187 C01 3X6 6 3X6 C02 C02 C 0 1 Y N N 217.112 -27.152 36.111 -0.626 -3.047 2.311 C02 3X6 7 3X6 C03 C03 C 0 1 Y N N 215.939 -27.649 36.720 -0.996 -1.977 1.517 C03 3X6 8 3X6 C04 C04 C 0 1 Y N N 214.877 -28.155 35.923 -0.104 -1.458 0.593 C04 3X6 9 3X6 C05 C05 C 0 1 Y N N 215.006 -28.162 34.509 1.166 -2.015 0.468 C05 3X6 10 3X6 O0A O0A O 0 1 N N N 213.707 -28.656 36.469 -0.467 -0.407 -0.189 O0A 3X6 11 3X6 C0C C0C C 0 1 Y N N 212.788 -27.856 37.125 -1.714 0.108 -0.027 C0C 3X6 12 3X6 C0D C0D C 0 1 Y N N 212.676 -26.452 36.923 -1.927 1.134 0.885 C0D 3X6 13 3X6 C0E C0E C 0 1 Y N N 211.712 -25.703 37.625 -3.194 1.664 1.055 C0E 3X6 14 3X6 C0F C0F C 0 1 Y N N 210.845 -26.338 38.532 -4.256 1.175 0.320 C0F 3X6 15 3X6 C0G C0G C 0 1 Y N N 210.914 -27.735 38.771 -4.051 0.143 -0.600 C0G 3X6 16 3X6 C0H C0H C 0 1 Y N N 211.902 -28.479 38.045 -2.769 -0.386 -0.774 C0H 3X6 17 3X6 CL1 CL1 CL 0 0 N N N 211.599 -24.005 37.368 -3.450 2.946 2.198 CL1 3X6 18 3X6 C0M C0M C 0 1 N N N 209.970 -28.309 39.724 -5.180 -0.382 -1.387 C0M 3X6 19 3X6 C0V C0V C 0 1 N N N 210.230 -29.454 40.394 -6.414 0.134 -1.220 C0V 3X6 20 3X6 C0X C0X C 0 1 N N N 209.425 -29.840 41.506 -7.512 -0.376 -1.985 C0X 3X6 21 3X6 N0Z N0Z N 0 1 N N N 208.772 -30.125 42.419 -8.383 -0.780 -2.592 N0Z 3X6 22 3X6 O0B O0B O 0 1 N N N 213.949 -28.657 33.777 2.046 -1.510 -0.437 O0B 3X6 23 3X6 C0O C0O C 0 1 N N N 214.166 -28.816 32.377 3.330 -2.132 -0.511 C0O 3X6 24 3X6 C0P C0P C 0 1 N N N 213.030 -29.648 31.759 4.176 -1.431 -1.577 C0P 3X6 25 3X6 N0S N0S N 0 1 N N N 212.955 -30.942 32.462 4.437 -0.051 -1.164 N0S 3X6 26 3X6 N11 N11 N 0 1 N N N 213.564 -33.138 32.862 5.794 1.490 -0.038 N11 3X6 27 3X6 O15 O15 O 0 1 N N N 214.555 -31.986 31.198 6.287 -0.667 -0.116 O15 3X6 28 3X6 O17 O17 O 0 1 N N N 212.651 -34.402 34.493 5.200 3.636 -0.019 O17 3X6 29 3X6 H1 H1 H 0 1 N N N 211.183 -32.218 35.059 3.129 3.007 -1.424 H1 3X6 30 3X6 H2 H2 H 0 1 N N N 211.425 -30.156 33.783 2.692 0.708 -2.114 H2 3X6 31 3X6 H3 H3 H 0 1 N N N 216.285 -27.661 32.822 2.517 -3.517 1.175 H3 3X6 32 3X6 H4 H4 H 0 1 N N N 218.133 -26.781 34.240 0.921 -4.435 2.809 H4 3X6 33 3X6 H5 H5 H 0 1 N N N 217.915 -26.766 36.721 -1.323 -3.451 3.031 H5 3X6 34 3X6 H6 H6 H 0 1 N N N 215.849 -27.645 37.796 -1.982 -1.547 1.616 H6 3X6 35 3X6 H7 H7 H 0 1 N N N 213.336 -25.957 36.226 -1.100 1.520 1.463 H7 3X6 36 3X6 H8 H8 H 0 1 N N N 210.109 -25.749 39.059 -5.244 1.590 0.456 H8 3X6 37 3X6 H9 H9 H 0 1 N N N 211.975 -29.545 38.202 -2.603 -1.181 -1.487 H9 3X6 38 3X6 H10 H10 H 0 1 N N N 209.033 -27.802 39.900 -5.019 -1.179 -2.097 H10 3X6 39 3X6 H11 H11 H 0 1 N N N 211.053 -30.081 40.085 -6.575 0.932 -0.510 H11 3X6 40 3X6 H12 H12 H 0 1 N N N 215.125 -29.330 32.213 3.828 -2.054 0.456 H12 3X6 41 3X6 H13 H13 H 0 1 N N N 214.194 -27.826 31.898 3.211 -3.182 -0.774 H13 3X6 42 3X6 H14 H14 H 0 1 N N N 212.076 -29.111 31.869 5.121 -1.960 -1.696 H14 3X6 43 3X6 H15 H15 H 0 1 N N N 213.234 -29.818 30.692 3.638 -1.431 -2.525 H15 3X6 44 3X6 H16 H16 H 0 1 N N N 214.133 -33.921 32.612 6.587 1.675 0.490 H16 3X6 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3X6 O15 C10 DOUB N N 1 3X6 C0P C0O SING N N 2 3X6 C0P N0S SING N N 3 3X6 C10 N0S SING N N 4 3X6 C10 N11 SING N N 5 3X6 C0O O0B SING N N 6 3X6 N0S C14 SING N N 7 3X6 N11 C12 SING N N 8 3X6 C14 C13 DOUB N N 9 3X6 O0B C05 SING N N 10 3X6 C00 C05 DOUB Y N 11 3X6 C00 C01 SING Y N 12 3X6 C12 C13 SING N N 13 3X6 C12 O17 DOUB N N 14 3X6 C05 C04 SING Y N 15 3X6 C01 C02 DOUB Y N 16 3X6 C04 O0A SING N N 17 3X6 C04 C03 DOUB Y N 18 3X6 C02 C03 SING Y N 19 3X6 O0A C0C SING N N 20 3X6 C0D C0C DOUB Y N 21 3X6 C0D C0E SING Y N 22 3X6 C0C C0H SING Y N 23 3X6 CL1 C0E SING N N 24 3X6 C0E C0F DOUB Y N 25 3X6 C0H C0G DOUB Y N 26 3X6 C0F C0G SING Y N 27 3X6 C0G C0M SING N N 28 3X6 C0M C0V DOUB N E 29 3X6 C0V C0X SING N N 30 3X6 C0X N0Z TRIP N N 31 3X6 C13 H1 SING N N 32 3X6 C14 H2 SING N N 33 3X6 C00 H3 SING N N 34 3X6 C01 H4 SING N N 35 3X6 C02 H5 SING N N 36 3X6 C03 H6 SING N N 37 3X6 C0D H7 SING N N 38 3X6 C0F H8 SING N N 39 3X6 C0H H9 SING N N 40 3X6 C0M H10 SING N N 41 3X6 C0V H11 SING N N 42 3X6 C0O H12 SING N N 43 3X6 C0O H13 SING N N 44 3X6 C0P H14 SING N N 45 3X6 C0P H15 SING N N 46 3X6 N11 H16 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3X6 SMILES ACDLabs 12.01 "N#C\C=C\c3cc(Oc2ccccc2OCCN1C=CC(=O)NC1=O)cc(Cl)c3" 3X6 InChI InChI 1.03 "InChI=1S/C21H16ClN3O4/c22-16-12-15(4-3-8-23)13-17(14-16)29-19-6-2-1-5-18(19)28-11-10-25-9-7-20(26)24-21(25)27/h1-7,9,12-14H,10-11H2,(H,24,26,27)/b4-3+" 3X6 InChIKey InChI 1.03 QQWLDKMLZHRQRI-ONEGZZNKSA-N 3X6 SMILES_CANONICAL CACTVS 3.385 "Clc1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)cc(\C=C\C#N)c1" 3X6 SMILES CACTVS 3.385 "Clc1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)cc(C=CC#N)c1" 3X6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)OCCN2C=CC(=O)NC2=O)Oc3cc(cc(c3)Cl)/C=C/C#N" 3X6 SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(c(c1)OCCN2C=CC(=O)NC2=O)Oc3cc(cc(c3)Cl)C=CC#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3X6 "SYSTEMATIC NAME" ACDLabs 12.01 "(2E)-3-(3-chloro-5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}phenyl)prop-2-enenitrile" 3X6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(E)-3-[3-[2-[2-[2,4-bis(oxidanylidene)pyrimidin-1-yl]ethoxy]phenoxy]-5-chloranyl-phenyl]prop-2-enenitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3X6 "Create component" 2014-12-02 RCSB 3X6 "Initial release" 2015-04-29 RCSB #