data_3XI # _chem_comp.id 3XI _chem_comp.name "N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene-1-[[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]cyclohexanecarboxamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H44 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-01 _chem_comp.pdbx_modified_date 2022-04-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 492.651 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3XI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7WO1 _chem_comp.pdbx_subcomponent_list "RXK VAL LEU ELF" _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3XI C22 C6 C 0 1 N N N -18.538 12.498 -18.399 8.787 1.098 -1.161 C01 RXK 1 3XI O25 O2 O 0 1 N N N -21.159 14.261 -22.016 5.155 -0.361 1.684 O01 RXK 2 3XI C21 C5 C 0 1 N N N -18.126 12.006 -19.782 8.653 -0.315 -0.590 C02 RXK 3 3XI C20 C4 C 0 1 N N N -18.744 12.827 -20.917 7.452 -0.370 0.357 C03 RXK 4 3XI C19 C20 C 0 1 N N N -19.362 14.163 -20.493 6.179 -0.008 -0.412 C04 RXK 5 3XI C24 C7 C 0 1 N N N -20.303 14.071 -19.289 6.314 1.405 -0.984 C05 RXK 6 3XI C23 C21 C 0 1 N N N -20.016 12.877 -18.384 7.515 1.460 -1.930 C06 RXK 7 3XI C18 C19 C 0 1 N N N -20.148 14.764 -21.655 4.997 -0.062 0.520 C07 RXK 8 3XI N17 N3 N 0 1 N N N -19.652 15.965 -22.302 3.762 0.222 0.059 N VAL 9 3XI C13 C2 C 0 1 N N S -20.378 16.576 -23.397 2.612 0.169 0.965 CA VAL 10 3XI C12 C16 C 0 1 N N N -19.562 16.537 -24.681 1.358 -0.088 0.171 C VAL 11 3XI O26 O3 O 0 1 N N N -18.441 16.918 -24.678 1.346 0.112 -1.026 O VAL 12 3XI C14 C17 C 0 1 N N N -20.594 18.044 -23.052 2.484 1.503 1.704 CB VAL 13 3XI C15 C3 C 0 1 N N N -20.812 18.218 -21.553 3.692 1.695 2.623 CG1 VAL 14 3XI C16 C18 C 0 1 N N N -21.726 18.654 -23.873 2.428 2.645 0.689 CG2 VAL 15 3XI N11 N2 N 0 1 N N N -20.163 16.054 -25.907 0.249 -0.539 0.789 N LEU 16 3XI C06 C12 C 0 1 N N S -19.369 16.043 -27.118 -0.934 -0.898 0.003 CA LEU 17 3XI C05 C11 C 0 1 N N N -19.393 17.461 -27.682 -2.165 -0.775 0.862 C LEU 18 3XI O27 O4 O 0 1 N N N -20.419 18.047 -27.764 -2.065 -0.421 2.018 O LEU 19 3XI C07 C13 C 0 1 N N N -19.952 15.053 -28.124 -0.800 -2.340 -0.491 CB LEU 20 3XI C08 C14 C 0 1 N N N -19.620 13.606 -27.760 0.378 -2.439 -1.463 CG LEU 21 3XI C10 C1 C 0 1 N N N -20.680 13.012 -26.835 0.590 -3.901 -1.860 CD1 LEU 22 3XI C09 C15 C 0 1 N N N -19.479 12.747 -29.013 0.078 -1.609 -2.713 CD2 LEU 23 3XI C31 C24 C 0 1 N N N -19.047 22.125 -25.616 -5.677 3.162 -0.056 C6 ELF 24 3XI C03 C10 C 0 1 N N S -18.212 19.457 -28.622 -4.576 -0.936 1.182 C11 ELF 25 3XI C30 C23 C 0 1 N N N -18.959 20.765 -26.107 -5.577 1.810 0.660 C13 ELF 26 3XI C34 C26 C 0 1 N N N -16.466 21.027 -25.452 -6.755 0.932 -1.341 C15 ELF 27 3XI C28 C8 C 0 1 N N N -17.265 20.325 -27.796 -5.790 -0.653 0.296 C17 ELF 28 3XI C02 C9 C 0 1 N N N -17.806 19.479 -30.094 -4.793 -2.222 1.936 C24 ELF 29 3XI C29 C22 C 0 1 N N S -17.620 20.277 -26.258 -5.612 0.701 -0.395 C25 ELF 30 3XI C32 C25 C 0 1 N N N -18.382 22.245 -24.298 -7.068 3.286 -0.677 C27 ELF 31 3XI N04 N1 N 0 1 N N N -18.163 18.103 -28.104 -3.378 -1.056 0.347 N3 ELF 32 3XI N33 N4 N 0 1 N N N -16.877 22.069 -24.411 -7.381 2.103 -1.468 N4 ELF 33 3XI O01 O1 O 0 1 N N N -17.800 20.503 -30.693 -4.028 -3.145 1.791 O3 ELF 34 3XI O35 O5 O 0 1 N N N -15.325 20.779 -25.649 -7.130 0.004 -2.027 O4 ELF 35 3XI H12 H12 H 0 1 N N N -18.362 11.699 -17.663 8.934 1.807 -0.346 H1 RXK 36 3XI H13 H13 H 0 1 N N N -17.936 13.380 -18.134 9.643 1.137 -1.835 H2 RXK 37 3XI H10 H10 H 0 1 N N N -18.446 10.959 -19.892 8.506 -1.024 -1.404 H3 RXK 38 3XI H8 H8 H 0 1 N N N -19.533 12.220 -21.385 7.356 -1.377 0.764 H5 RXK 39 3XI H31 H31 H 0 1 N N N -18.544 14.853 -20.237 6.033 -0.717 -1.227 H6 RXK 40 3XI H14 H14 H 0 1 N N N -20.200 14.991 -18.695 5.408 1.663 -1.531 H7 RXK 41 3XI H15 H15 H 0 1 N N N -21.335 13.987 -19.659 6.461 2.114 -0.169 H8 RXK 42 3XI H32 H32 H 0 1 N N N -20.308 13.132 -17.355 7.611 2.467 -2.337 H9 RXK 43 3XI H33 H33 H 0 1 N N N -20.608 12.017 -18.731 7.368 0.751 -2.745 H10 RXK 44 3XI H11 H11 H 0 1 N N N -17.031 12.065 -19.863 9.559 -0.573 -0.042 H11 RXK 45 3XI H9 H9 H 0 1 N N N -17.955 13.036 -21.655 7.598 0.339 1.171 H12 RXK 46 3XI H43 H43 H 0 1 N N N -18.797 16.377 -21.987 3.635 0.461 -0.872 H VAL 47 3XI H4 H4 H 0 1 N N N -21.348 16.080 -23.553 2.755 -0.634 1.688 HA VAL 48 3XI H27 H27 H 0 1 N N N -19.671 18.582 -23.314 1.571 1.501 2.300 HB VAL 49 3XI H5 H5 H 0 1 N N N -19.973 17.764 -21.005 4.590 1.822 2.020 HG11 VAL 50 3XI H6 H6 H 0 1 N N N -20.869 19.290 -21.313 3.541 2.580 3.241 HG12 VAL 51 3XI H7 H7 H 0 1 N N N -21.751 17.726 -21.260 3.805 0.820 3.263 HG13 VAL 52 3XI H28 H28 H 0 1 N N N -21.852 19.711 -23.597 1.567 2.508 0.034 HG21 VAL 53 3XI H29 H29 H 0 1 N N N -21.483 18.581 -24.943 2.336 3.595 1.215 HG22 VAL 54 3XI H30 H30 H 0 1 N N N -22.660 18.109 -23.671 3.341 2.647 0.093 HG23 VAL 55 3XI H42 H42 H 0 1 N N N -21.110 15.734 -25.917 0.234 -0.627 1.755 H2 LEU 56 3XI H20 H20 H 0 1 N N N -18.330 15.760 -26.892 -1.019 -0.228 -0.853 HA LEU 57 3XI H21 H21 H 0 1 N N N -19.539 15.273 -29.119 -0.626 -3.001 0.358 HB2 LEU 58 3XI H22 H22 H 0 1 N N N -21.045 15.172 -28.147 -1.717 -2.637 -1.000 HB3 LEU 59 3XI H23 H23 H 0 1 N N N -18.657 13.598 -27.228 1.279 -2.059 -0.982 HG LEU 60 3XI H1 H1 H 0 1 N N N -20.774 13.638 -25.935 -0.311 -4.281 -2.342 HD11 LEU 61 3XI H2 H2 H 0 1 N N N -21.646 12.977 -27.360 1.429 -3.971 -2.553 HD12 LEU 62 3XI H3 H3 H 0 1 N N N -20.383 11.994 -26.544 0.804 -4.492 -0.970 HD13 LEU 63 3XI H24 H24 H 0 1 N N N -19.241 11.713 -28.724 -0.823 -1.989 -3.194 HD21 LEU 64 3XI H25 H25 H 0 1 N N N -20.424 12.762 -29.576 -0.073 -0.567 -2.430 HD22 LEU 65 3XI H26 H26 H 0 1 N N N -18.671 13.147 -29.643 0.917 -1.679 -3.405 HD23 LEU 66 3XI H37 H37 H 0 1 N N N -18.556 22.801 -26.332 -5.524 3.968 0.662 H1 ELF 67 3XI H38 H38 H 0 1 N N N -20.106 22.405 -25.514 -4.920 3.221 -0.838 H2 ELF 68 3XI H19 H19 H 0 1 N N N -19.233 19.857 -28.529 -4.444 -0.118 1.890 H3 ELF 69 3XI H35 H35 H 0 1 N N N -19.454 20.720 -27.088 -4.641 1.757 1.216 H4 ELF 70 3XI H36 H36 H 0 1 N N N -19.487 20.109 -25.400 -6.418 1.693 1.343 H5 ELF 71 3XI H16 H16 H 0 1 N N N -16.236 19.962 -27.936 -5.881 -1.436 -0.457 H6 ELF 72 3XI H17 H17 H 0 1 N N N -17.338 21.365 -28.146 -6.691 -0.632 0.909 H7 ELF 73 3XI H18 H18 H 0 1 N N N -17.524 18.562 -30.590 -5.634 -2.320 2.607 H8 ELF 74 3XI H34 H34 H 0 1 N N N -17.589 19.221 -25.952 -4.676 0.702 -0.953 H9 ELF 75 3XI H39 H39 H 0 1 N N N -18.594 23.240 -23.881 -7.808 3.397 0.115 H10 ELF 76 3XI H40 H40 H 0 1 N N N -18.782 21.472 -23.625 -7.097 4.165 -1.322 H11 ELF 77 3XI H41 H41 H 0 1 N N N -17.291 17.618 -28.039 -3.459 -1.339 -0.578 H14 ELF 78 3XI H44 H44 H 0 1 N N N -16.220 22.583 -23.859 -8.089 2.171 -2.128 H15 ELF 79 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3XI O01 C02 DOUB N N 1 3XI C02 C03 SING N N 2 3XI C09 C08 SING N N 3 3XI C03 N04 SING N N 4 3XI C03 C28 SING N N 5 3XI C07 C08 SING N N 6 3XI C07 C06 SING N N 7 3XI N04 C05 SING N N 8 3XI C28 C29 SING N N 9 3XI O27 C05 DOUB N N 10 3XI C08 C10 SING N N 11 3XI C05 C06 SING N N 12 3XI C06 N11 SING N N 13 3XI C29 C30 SING N N 14 3XI C29 C34 SING N N 15 3XI C30 C31 SING N N 16 3XI N11 C12 SING N N 17 3XI O35 C34 DOUB N N 18 3XI C31 C32 SING N N 19 3XI C34 N33 SING N N 20 3XI C12 O26 DOUB N N 21 3XI C12 C13 SING N N 22 3XI N33 C32 SING N N 23 3XI C16 C14 SING N N 24 3XI C13 C14 SING N N 25 3XI C13 N17 SING N N 26 3XI C14 C15 SING N N 27 3XI N17 C18 SING N N 28 3XI O25 C18 DOUB N N 29 3XI C18 C19 SING N N 30 3XI C20 C19 SING N N 31 3XI C20 C21 SING N N 32 3XI C19 C24 SING N N 33 3XI C21 C22 SING N N 34 3XI C24 C23 SING N N 35 3XI C22 C23 SING N N 36 3XI C10 H1 SING N N 37 3XI C10 H2 SING N N 38 3XI C10 H3 SING N N 39 3XI C13 H4 SING N N 40 3XI C15 H5 SING N N 41 3XI C15 H6 SING N N 42 3XI C15 H7 SING N N 43 3XI C20 H8 SING N N 44 3XI C20 H9 SING N N 45 3XI C21 H10 SING N N 46 3XI C21 H11 SING N N 47 3XI C22 H12 SING N N 48 3XI C22 H13 SING N N 49 3XI C24 H14 SING N N 50 3XI C24 H15 SING N N 51 3XI C28 H16 SING N N 52 3XI C28 H17 SING N N 53 3XI C02 H18 SING N N 54 3XI C03 H19 SING N N 55 3XI C06 H20 SING N N 56 3XI C07 H21 SING N N 57 3XI C07 H22 SING N N 58 3XI C08 H23 SING N N 59 3XI C09 H24 SING N N 60 3XI C09 H25 SING N N 61 3XI C09 H26 SING N N 62 3XI C14 H27 SING N N 63 3XI C16 H28 SING N N 64 3XI C16 H29 SING N N 65 3XI C16 H30 SING N N 66 3XI C19 H31 SING N N 67 3XI C23 H32 SING N N 68 3XI C23 H33 SING N N 69 3XI C29 H34 SING N N 70 3XI C30 H35 SING N N 71 3XI C30 H36 SING N N 72 3XI C31 H37 SING N N 73 3XI C31 H38 SING N N 74 3XI C32 H39 SING N N 75 3XI C32 H40 SING N N 76 3XI N04 H41 SING N N 77 3XI N11 H42 SING N N 78 3XI N17 H43 SING N N 79 3XI N33 H44 SING N N 80 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3XI InChI InChI 1.03 "InChI=1S/C26H44N4O5/c1-16(2)13-21(25(34)28-20(15-31)14-19-11-8-12-27-23(19)32)29-26(35)22(17(3)4)30-24(33)18-9-6-5-7-10-18/h15-22H,5-14H2,1-4H3,(H,27,32)(H,28,34)(H,29,35)(H,30,33)/t19-,20-,21-,22-/m0/s1" 3XI InChIKey InChI 1.03 LOOFBLJETYWAIL-CMOCDZPBSA-N 3XI SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)[C@@H](NC(=O)C1CCCCC1)C(C)C)C(=O)N[C@@H](C[C@@H]2CCCNC2=O)C=O" 3XI SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)[CH](NC(=O)C1CCCCC1)C(C)C)C(=O)N[CH](C[CH]2CCCNC2=O)C=O" 3XI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCCNC1=O)C=O)NC(=O)[C@H](C(C)C)NC(=O)C2CCCCC2" 3XI SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCCNC1=O)C=O)NC(=O)C(C(C)C)NC(=O)C2CCCCC2" # _pdbx_chem_comp_identifier.comp_id 3XI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]cyclohexanecarboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3XI "Create component" 2022-02-01 PDBJ 3XI "Modify component comp_id" 2022-02-02 PDBJ 3XI "Initial release" 2022-04-13 RCSB ##