data_3YA # _chem_comp.id 3YA _chem_comp.name "N-{4-[4-(2-amino-4-oxo-1,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]benzoyl}-L-glutamic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H24 N4 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-12-10 _chem_comp.pdbx_modified_date 2016-04-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 472.514 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 3YA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4ZYU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 3YA C13 C1 C 0 1 Y N N 21.878 -16.003 -34.406 2.969 0.332 -0.180 C13 3YA 1 3YA C14 C2 C 0 1 Y N N 23.254 -17.956 -34.778 2.616 -1.644 -1.521 C14 3YA 2 3YA C16 C3 C 0 1 Y N N 24.340 -17.288 -34.236 1.289 -1.298 -1.670 C16 3YA 3 3YA N1 N1 N 0 1 N N N 22.304 -17.139 -27.028 -8.738 1.419 0.757 N1 3YA 4 3YA C2 C4 C 0 1 N N N 21.897 -16.122 -26.258 -9.830 0.916 0.130 C2 3YA 5 3YA N3 N2 N 0 1 N N N 22.575 -14.966 -26.194 -9.788 -0.202 -0.562 N3 3YA 6 3YA C4 C5 C 0 1 N N N 23.699 -14.746 -26.897 -8.656 -0.905 -0.684 C4 3YA 7 3YA S5 S1 S 0 1 Y N N 24.163 -18.007 -28.762 -5.952 1.177 1.372 S5 3YA 8 3YA C6 C6 C 0 1 Y N N 25.433 -16.974 -29.207 -5.210 -0.255 0.684 C6 3YA 9 3YA C7 C7 C 0 1 Y N N 25.310 -15.766 -28.536 -6.089 -0.964 0.000 C7 3YA 10 3YA C8 C8 C 0 1 Y N N 24.189 -15.747 -27.722 -7.429 -0.410 -0.024 C8 3YA 11 3YA C9 C9 C 0 1 Y N N 23.422 -16.904 -27.721 -7.520 0.772 0.688 C9 3YA 12 3YA O10 O1 O 0 1 N N N 24.269 -13.665 -26.786 -8.637 -1.940 -1.330 O10 3YA 13 3YA N11 N3 N 0 1 N N N 20.724 -16.258 -25.477 -11.016 1.594 0.220 N11 3YA 14 3YA C12 C10 C 0 1 Y N N 22.027 -17.308 -34.866 3.467 -0.829 -0.773 C12 3YA 15 3YA C17 C11 C 0 1 N N N 20.823 -18.057 -35.456 4.890 -1.194 -0.609 C17 3YA 16 3YA O18 O2 O 0 1 N N N 20.765 -18.322 -36.643 5.322 -2.206 -1.127 O18 3YA 17 3YA N19 N4 N 0 1 N N N 19.785 -18.435 -34.563 5.709 -0.406 0.114 N19 3YA 18 3YA C20 C12 C 0 1 N N S 18.637 -19.145 -35.003 7.120 -0.767 0.276 C20 3YA 19 3YA C21 C13 C 0 1 N N N 18.399 -20.287 -34.037 7.941 0.493 0.556 C21 3YA 20 3YA C22 C14 C 0 1 N N N 19.642 -21.149 -34.020 7.896 1.413 -0.665 C22 3YA 21 3YA C23 C15 C 0 1 N N N 19.968 -21.546 -35.446 8.705 2.655 -0.389 C23 3YA 22 3YA O24 O3 O 0 1 N N N 21.029 -21.152 -35.999 8.809 3.610 -1.326 O24 3YA 23 3YA O25 O4 O 0 1 N N N 19.168 -22.273 -36.089 9.259 2.789 0.676 O25 3YA 24 3YA C26 C16 C 0 1 N N N 17.418 -18.248 -35.116 7.263 -1.727 1.429 C26 3YA 25 3YA O27 O5 O 0 1 N N N 17.038 -17.558 -34.130 8.475 -2.197 1.764 O27 3YA 26 3YA O28 O6 O 0 1 N N N 16.779 -18.193 -36.203 6.287 -2.074 2.051 O28 3YA 27 3YA C29 C17 C 0 1 N N N 26.524 -17.352 -30.177 -3.759 -0.627 0.850 C29 3YA 28 3YA C30 C18 C 0 1 N N N 26.054 -17.066 -31.593 -2.940 -0.010 -0.285 C30 3YA 29 3YA C31 C19 C 0 1 N N N 25.699 -15.597 -31.735 -1.467 -0.388 -0.115 C31 3YA 30 3YA C32 C20 C 0 1 N N N 25.379 -15.267 -33.182 -0.648 0.230 -1.251 C32 3YA 31 3YA C33 C21 C 0 1 Y N N 24.195 -15.979 -33.787 0.802 -0.143 -1.084 C33 3YA 32 3YA C15 C22 C 0 1 Y N N 22.966 -15.335 -33.863 1.640 0.667 -0.337 C15 3YA 33 3YA H1 H1 H 0 1 N N N 20.918 -15.512 -34.472 3.621 0.964 0.404 H1 3YA 34 3YA H2 H2 H 0 1 N N N 23.360 -18.972 -35.129 2.994 -2.546 -1.980 H2 3YA 35 3YA H3 H3 H 0 1 N N N 25.297 -17.782 -34.162 0.628 -1.929 -2.246 H3 3YA 36 3YA H5 H5 H 0 1 N N N 26.002 -14.943 -28.636 -5.830 -1.884 -0.502 H5 3YA 37 3YA H6 H6 H 0 1 N N N 20.420 -15.503 -24.896 -11.065 2.420 0.727 H6 3YA 38 3YA H7 H7 H 0 1 N N N 20.200 -17.109 -25.506 -11.807 1.249 -0.222 H7 3YA 39 3YA H8 H8 H 0 1 N N N 19.865 -18.194 -33.596 5.365 0.402 0.527 H8 3YA 40 3YA H9 H9 H 0 1 N N N 18.835 -19.575 -35.996 7.481 -1.240 -0.638 H9 3YA 41 3YA H10 H10 H 0 1 N N N 18.206 -19.890 -33.029 7.524 1.014 1.418 H10 3YA 42 3YA H11 H11 H 0 1 N N N 17.536 -20.883 -34.368 8.974 0.215 0.765 H11 3YA 43 3YA H12 H12 H 0 1 N N N 19.461 -22.050 -33.416 8.313 0.892 -1.527 H12 3YA 44 3YA H13 H13 H 0 1 N N N 20.481 -20.582 -33.591 6.863 1.691 -0.873 H13 3YA 45 3YA H14 H14 H 0 1 N N N 21.068 -21.489 -36.886 9.338 4.388 -1.102 H14 3YA 46 3YA H15 H15 H 0 1 N N N 16.266 -17.060 -34.371 8.517 -2.810 2.510 H15 3YA 47 3YA H16 H16 H 0 1 N N N 26.753 -18.423 -30.074 -3.395 -0.252 1.807 H16 3YA 48 3YA H17 H17 H 0 1 N N N 27.427 -16.762 -29.963 -3.657 -1.712 0.824 H17 3YA 49 3YA H18 H18 H 0 1 N N N 25.167 -17.678 -31.813 -3.304 -0.386 -1.241 H18 3YA 50 3YA H19 H19 H 0 1 N N N 26.857 -17.317 -32.301 -3.042 1.075 -0.258 H19 3YA 51 3YA H20 H20 H 0 1 N N N 26.551 -14.985 -31.403 -1.104 -0.012 0.841 H20 3YA 52 3YA H21 H21 H 0 1 N N N 24.822 -15.374 -31.110 -1.365 -1.473 -0.142 H21 3YA 53 3YA H22 H22 H 0 1 N N N 26.264 -15.517 -33.786 -1.012 -0.146 -2.207 H22 3YA 54 3YA H23 H23 H 0 1 N N N 25.186 -14.186 -33.244 -0.751 1.314 -1.224 H23 3YA 55 3YA H24 H24 H 0 1 N N N 22.859 -14.323 -33.502 1.252 1.563 0.125 H24 3YA 56 3YA H25 H25 H 0 1 N N N 21.810 -18.007 -27.080 -8.813 2.247 1.257 H25 3YA 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3YA O18 C17 DOUB N N 1 3YA O28 C26 DOUB N N 2 3YA O25 C23 DOUB N N 3 3YA O24 C23 SING N N 4 3YA C17 C12 SING N N 5 3YA C17 N19 SING N N 6 3YA C23 C22 SING N N 7 3YA C26 C20 SING N N 8 3YA C26 O27 SING N N 9 3YA C20 N19 SING N N 10 3YA C20 C21 SING N N 11 3YA C12 C14 DOUB Y N 12 3YA C12 C13 SING Y N 13 3YA C14 C16 SING Y N 14 3YA C13 C15 DOUB Y N 15 3YA C16 C33 DOUB Y N 16 3YA C21 C22 SING N N 17 3YA C15 C33 SING Y N 18 3YA C33 C32 SING N N 19 3YA C32 C31 SING N N 20 3YA C31 C30 SING N N 21 3YA C30 C29 SING N N 22 3YA C29 C6 SING N N 23 3YA C6 S5 SING Y N 24 3YA C6 C7 DOUB Y N 25 3YA S5 C9 SING Y N 26 3YA C7 C8 SING Y N 27 3YA C8 C9 DOUB Y N 28 3YA C8 C4 SING N N 29 3YA C9 N1 SING N N 30 3YA N1 C2 SING N N 31 3YA C4 O10 DOUB N N 32 3YA C4 N3 SING N N 33 3YA C2 N3 DOUB N N 34 3YA C2 N11 SING N N 35 3YA C13 H1 SING N N 36 3YA C14 H2 SING N N 37 3YA C16 H3 SING N N 38 3YA C7 H5 SING N N 39 3YA N11 H6 SING N N 40 3YA N11 H7 SING N N 41 3YA N19 H8 SING N N 42 3YA C20 H9 SING N N 43 3YA C21 H10 SING N N 44 3YA C21 H11 SING N N 45 3YA C22 H12 SING N N 46 3YA C22 H13 SING N N 47 3YA O24 H14 SING N N 48 3YA O27 H15 SING N N 49 3YA C29 H16 SING N N 50 3YA C29 H17 SING N N 51 3YA C30 H18 SING N N 52 3YA C30 H19 SING N N 53 3YA C31 H20 SING N N 54 3YA C31 H21 SING N N 55 3YA C32 H22 SING N N 56 3YA C32 H23 SING N N 57 3YA C15 H24 SING N N 58 3YA N1 H25 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 3YA SMILES ACDLabs 12.01 "c1cc(ccc1C(NC(CCC(O)=O)C(O)=O)=O)CCCCc2sc3NC(=NC(=O)c3c2)N" 3YA InChI InChI 1.03 "InChI=1S/C22H24N4O6S/c23-22-25-19(30)15-11-14(33-20(15)26-22)4-2-1-3-12-5-7-13(8-6-12)18(29)24-16(21(31)32)9-10-17(27)28/h5-8,11,16H,1-4,9-10H2,(H,24,29)(H,27,28)(H,31,32)(H3,23,25,26,30)/t16-/m0/s1" 3YA InChIKey InChI 1.03 KVBZUTNKUVNMNN-INIZCTEOSA-N 3YA SMILES_CANONICAL CACTVS 3.385 "NC1=NC(=O)c2cc(CCCCc3ccc(cc3)C(=O)N[C@@H](CCC(O)=O)C(O)=O)sc2N1" 3YA SMILES CACTVS 3.385 "NC1=NC(=O)c2cc(CCCCc3ccc(cc3)C(=O)N[CH](CCC(O)=O)C(O)=O)sc2N1" 3YA SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1CCCCc2cc3c(s2)NC(=NC3=O)N)C(=O)N[C@@H](CCC(=O)O)C(=O)O" 3YA SMILES "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1CCCCc2cc3c(s2)NC(=NC3=O)N)C(=O)NC(CCC(=O)O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 3YA "SYSTEMATIC NAME" ACDLabs 12.01 "N-{4-[4-(2-amino-4-oxo-1,4-dihydrothieno[2,3-d]pyrimidin-6-yl)butyl]benzoyl}-L-glutamic acid" 3YA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2S)-2-[[4-[4-(2-azanyl-4-oxidanylidene-1H-thieno[2,3-d]pyrimidin-6-yl)butyl]phenyl]carbonylamino]pentanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 3YA "Create component" 2014-12-10 RCSB 3YA "Modify name" 2015-06-04 RCSB 3YA "Initial release" 2016-04-20 RCSB #