data_43Y # _chem_comp.id 43Y _chem_comp.name "[(2R)-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-2-propanoyloxy-propyl] propanoate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H29 N O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1,2-dipropionyl-sn-glycero-3-phosphocholine" _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2015-02-03 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 370.356 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 43Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4XCF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 43Y C11 C1 C 0 1 N N N -11.122 4.343 -1.194 5.396 -0.620 0.021 C11 43Y 1 43Y O11 O1 O 0 1 N N N -11.008 3.173 -0.813 5.606 -1.676 -0.526 O11 43Y 2 43Y O3 O2 O 0 1 N N N -11.398 4.628 -2.460 4.135 -0.216 0.242 O3 43Y 3 43Y C3 C2 C 0 1 N N N -11.181 3.632 -3.486 3.073 -1.100 -0.204 C3 43Y 4 43Y C2 C3 C 0 1 N N R -12.455 2.863 -3.773 1.717 -0.477 0.131 C2 43Y 5 43Y C1 C4 C 0 1 N N N -12.311 2.058 -5.045 0.601 -1.462 -0.224 C1 43Y 6 43Y O3P O3 O 0 1 N N N -12.109 2.864 -6.179 -0.657 -0.928 0.195 O3P 43Y 7 43Y P P1 P 0 1 N N N -12.511 2.321 -7.622 -2.053 -1.701 -0.021 P 43Y 8 43Y O1P O4 O 0 1 N N N -11.953 3.298 -8.646 -2.215 -2.036 -1.453 O1P 43Y 9 43Y O2P O5 O 0 1 N N N -12.058 0.915 -7.866 -2.057 -3.054 0.851 O2P 43Y 10 43Y O4P O6 O 0 1 N N N -14.077 2.355 -7.652 -3.268 -0.755 0.450 O4P 43Y 11 43Y C4 C5 C 0 1 N N N -14.645 3.587 -7.303 -4.641 -1.115 0.289 C4 43Y 12 43Y C5 C6 C 0 1 N N N -16.134 3.679 -7.296 -5.529 0.003 0.840 C5 43Y 13 43Y N N1 N 1 1 N N N -16.903 3.983 -8.517 -5.374 1.206 0.011 N 43Y 14 43Y C7 C7 C 0 1 N N N -18.171 4.481 -8.019 -5.642 0.870 -1.394 C7 43Y 15 43Y C8 C8 C 0 1 N N N -17.093 2.799 -9.332 -6.323 2.234 0.458 C8 43Y 16 43Y C6 C9 C 0 1 N N N -16.246 4.996 -9.338 -4.003 1.716 0.140 C6 43Y 17 43Y O2 O7 O 0 1 N N N -13.554 3.718 -4.002 1.544 0.746 -0.633 O2 43Y 18 43Y C31 C10 C 0 1 N N N -14.581 3.679 -3.059 1.977 1.884 -0.068 C31 43Y 19 43Y O31 O8 O 0 1 N N N -14.560 2.965 -2.081 2.484 1.859 1.029 O31 43Y 20 43Y C32 C11 C 0 1 N N N -15.751 4.583 -3.375 1.832 3.192 -0.801 C32 43Y 21 43Y C33 C12 C 0 1 N N N -16.907 4.574 -2.385 2.401 4.324 0.058 C33 43Y 22 43Y H2 H2 H 0 1 N N N -10.405 2.930 -3.147 3.150 -1.246 -1.281 H2 43Y 23 43Y H3 H3 H 0 1 N N N -10.847 4.131 -4.407 3.165 -2.062 0.301 H3 43Y 24 43Y H4 H4 H 0 1 N N N -12.662 2.181 -2.935 1.674 -0.249 1.196 H4 43Y 25 43Y H5 H5 H 0 1 N N N -13.227 1.467 -5.192 0.587 -1.621 -1.303 H5 43Y 26 43Y H6 H6 H 0 1 N N N -11.451 1.381 -4.937 0.780 -2.411 0.281 H6 43Y 27 43Y H7 H7 H 0 1 N N N -11.494 0.892 -8.630 -1.954 -2.910 1.802 H7 43Y 28 43Y H8 H8 H 0 1 N N N -14.294 3.837 -6.291 -4.857 -1.261 -0.770 H8 43Y 29 43Y H9 H9 H 0 1 N N N -14.271 4.336 -8.016 -4.841 -2.039 0.831 H9 43Y 30 43Y H10 H10 H 0 1 N N N -16.391 4.462 -6.567 -6.571 -0.319 0.823 H10 43Y 31 43Y H11 H11 H 0 1 N N N -16.501 2.707 -6.935 -5.235 0.228 1.865 H11 43Y 32 43Y H12 H12 H 0 1 N N N -18.653 3.707 -7.403 -6.659 0.491 -1.490 H12 43Y 33 43Y H13 H13 H 0 1 N N N -17.998 5.380 -7.409 -5.527 1.762 -2.009 H13 43Y 34 43Y H14 H14 H 0 1 N N N -18.824 4.734 -8.867 -4.937 0.107 -1.726 H14 43Y 35 43Y H15 H15 H 0 1 N N N -17.588 2.018 -8.736 -7.341 1.855 0.362 H15 43Y 36 43Y H16 H16 H 0 1 N N N -17.720 3.049 -10.201 -6.125 2.483 1.500 H16 43Y 37 43Y H17 H17 H 0 1 N N N -16.116 2.432 -9.678 -6.208 3.126 -0.158 H17 43Y 38 43Y H18 H18 H 0 1 N N N -16.090 5.907 -8.742 -3.940 2.706 -0.311 H18 43Y 39 43Y H19 H19 H 0 1 N N N -15.275 4.614 -9.684 -3.737 1.780 1.195 H19 43Y 40 43Y H20 H20 H 0 1 N N N -16.879 5.231 -10.207 -3.315 1.041 -0.369 H20 43Y 41 43Y H21 H21 H 0 1 N N N -15.370 5.613 -3.434 2.377 3.143 -1.744 H21 43Y 42 43Y H22 H22 H 0 1 N N N -16.149 4.283 -4.355 0.777 3.382 -0.999 H22 43Y 43 43Y H23 H23 H 0 1 N N N -17.689 5.268 -2.727 2.296 5.270 -0.472 H23 43Y 44 43Y H24 H24 H 0 1 N N N -17.323 3.558 -2.317 1.857 4.373 1.001 H24 43Y 45 43Y H25 H25 H 0 1 N N N -16.544 4.889 -1.395 3.456 4.134 0.257 H25 43Y 46 43Y C9 C13 C 0 1 N N N ? ? ? 6.551 0.243 0.461 C9 43Y 47 43Y C10 C14 C 0 1 N N N ? ? ? 7.869 -0.446 0.100 C10 43Y 48 43Y H1 H1 H 0 1 N N N ? ? ? 6.496 1.208 -0.041 H1 43Y 49 43Y H26 H26 H 0 1 N N N ? ? ? 6.503 0.391 1.540 H26 43Y 50 43Y H27 H27 H 0 1 N N N ? ? ? 8.704 0.178 0.418 H27 43Y 51 43Y H28 H28 H 0 1 N N N ? ? ? 7.924 -1.411 0.602 H28 43Y 52 43Y H29 H29 H 0 1 N N N ? ? ? 7.917 -0.594 -0.979 H29 43Y 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 43Y C6 N SING N N 1 43Y C8 N SING N N 2 43Y O1P P DOUB N N 3 43Y N C7 SING N N 4 43Y N C5 SING N N 5 43Y O2P P SING N N 6 43Y O4P P SING N N 7 43Y O4P C4 SING N N 8 43Y P O3P SING N N 9 43Y C4 C5 SING N N 10 43Y O3P C1 SING N N 11 43Y C1 C2 SING N N 12 43Y O2 C2 SING N N 13 43Y O2 C31 SING N N 14 43Y C2 C3 SING N N 15 43Y C3 O3 SING N N 16 43Y C32 C31 SING N N 17 43Y C32 C33 SING N N 18 43Y C31 O31 DOUB N N 19 43Y O3 C11 SING N N 20 43Y C11 O11 DOUB N N 21 43Y C3 H2 SING N N 22 43Y C3 H3 SING N N 23 43Y C2 H4 SING N N 24 43Y C1 H5 SING N N 25 43Y C1 H6 SING N N 26 43Y O2P H7 SING N N 27 43Y C4 H8 SING N N 28 43Y C4 H9 SING N N 29 43Y C5 H10 SING N N 30 43Y C5 H11 SING N N 31 43Y C7 H12 SING N N 32 43Y C7 H13 SING N N 33 43Y C7 H14 SING N N 34 43Y C8 H15 SING N N 35 43Y C8 H16 SING N N 36 43Y C8 H17 SING N N 37 43Y C6 H18 SING N N 38 43Y C6 H19 SING N N 39 43Y C6 H20 SING N N 40 43Y C32 H21 SING N N 41 43Y C32 H22 SING N N 42 43Y C33 H23 SING N N 43 43Y C33 H24 SING N N 44 43Y C33 H25 SING N N 45 43Y C11 C9 SING N N 46 43Y C9 C10 SING N N 47 43Y C9 H1 SING N N 48 43Y C9 H26 SING N N 49 43Y C10 H27 SING N N 50 43Y C10 H28 SING N N 51 43Y C10 H29 SING N N 52 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 43Y SMILES ACDLabs 12.01 "O=C(OCC(OC(=O)CC)COP(=O)(OCC[N+](C)(C)C)O)CC" 43Y InChI InChI 1.03 "InChI=1S/C14H28NO8P/c1-6-13(16)20-10-12(23-14(17)7-2)11-22-24(18,19)21-9-8-15(3,4)5/h12H,6-11H2,1-5H3/p+1/t12-/m1/s1" 43Y InChIKey InChI 1.03 LMBVWVMURYPSQM-GFCCVEGCSA-O 43Y SMILES_CANONICAL CACTVS 3.385 "CCC(=O)OC[C@H](CO[P](O)(=O)OCC[N+](C)(C)C)OC(=O)CC" 43Y SMILES CACTVS 3.385 "CCC(=O)OC[CH](CO[P](O)(=O)OCC[N+](C)(C)C)OC(=O)CC" 43Y SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCC(=O)OC[C@H](COP(=O)(O)OCC[N+](C)(C)C)OC(=O)CC" 43Y SMILES "OpenEye OEToolkits" 1.7.6 "CCC(=O)OCC(COP(=O)(O)OCC[N+](C)(C)C)OC(=O)CC" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 43Y "SYSTEMATIC NAME" ACDLabs 12.01 "(4S,7R)-4-hydroxy-N,N,N-trimethyl-10-oxo-7-(propanoyloxy)-3,5,9-trioxa-4-phosphadodecan-1-aminium 4-oxide" 43Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[[(2R)-2,3-di(propanoyloxy)propoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 43Y "Create component" 2015-02-03 RCSB 43Y "Modify synonyms" 2015-02-11 RCSB 43Y "Other modification" 2015-02-24 RCSB 43Y "Initial release" 2016-02-03 RCSB 43Y "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 43Y _pdbx_chem_comp_synonyms.name "1,2-dipropionyl-sn-glycero-3-phosphocholine" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##