data_4A2 # _chem_comp.id 4A2 _chem_comp.name "(2E)-2-(3-fluoranyl-4-methoxy-phenyl)imino-1-[[2-(trifluoromethyl)phenyl]methyl]-3H-benzimidazole-5-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H17 F4 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-11-23 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 459.393 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4A2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3ZCW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4A2 FAA FAA F 0 1 N N N 1.986 6.920 29.481 4.579 -4.093 -0.378 FAA 4A2 1 4A2 CAC CAC C 0 1 N N N 2.102 7.075 30.807 3.633 -3.113 -0.698 CAC 4A2 2 4A2 FAB FAB F 0 1 N N N 2.609 6.002 31.407 4.265 -2.053 -1.357 FAB 4A2 3 4A2 FAG FAG F 0 1 N N N 2.892 8.097 31.040 2.655 -3.664 -1.532 FAG 4A2 4 4A2 CAD CAD C 0 1 Y N N 0.702 7.420 31.311 2.988 -2.605 0.566 CAD 4A2 5 4A2 CAE CAE C 0 1 Y N N 0.200 6.721 32.408 3.305 -3.181 1.783 CAE 4A2 6 4A2 CAF CAF C 0 1 Y N N -1.069 7.012 32.872 2.713 -2.715 2.942 CAF 4A2 7 4A2 CAK CAK C 0 1 Y N N -1.817 8.001 32.242 1.805 -1.674 2.884 CAK 4A2 8 4A2 CAJ CAJ C 0 1 Y N N -1.319 8.701 31.153 1.489 -1.099 1.668 CAJ 4A2 9 4A2 CAI CAI C 0 1 Y N N -0.045 8.412 30.679 2.084 -1.561 0.509 CAI 4A2 10 4A2 CAH CAH C 0 1 N N N 0.459 9.194 29.464 1.744 -0.930 -0.816 CAH 4A2 11 4A2 NAP NAP N 0 1 N N N 0.032 10.605 29.464 0.850 0.210 -0.599 NAP 4A2 12 4A2 CAO CAO C 0 1 Y N N 0.656 11.594 30.131 1.240 1.536 -0.470 CAO 4A2 13 4A2 CAN CAN C 0 1 Y N N 1.771 11.609 30.970 2.484 2.157 -0.500 CAN 4A2 14 4A2 CAM CAM C 0 1 Y N N 2.199 12.820 31.546 2.578 3.521 -0.341 CAM 4A2 15 4A2 CAW CAW C 0 1 Y N N 1.507 14.003 31.271 1.424 4.287 -0.148 CAW 4A2 16 4A2 CAV CAV C 0 1 N N N 1.972 15.328 31.908 1.527 5.748 0.022 CAV 4A2 17 4A2 OAL OAL O 0 1 N N N 1.214 16.322 31.925 2.734 6.346 -0.008 OAL 4A2 18 4A2 OBG OBG O 0 1 N N N 3.103 15.405 32.426 0.524 6.413 0.190 OBG 4A2 19 4A2 CAX CAX C 0 1 Y N N 0.384 13.976 30.434 0.173 3.666 -0.117 CAX 4A2 20 4A2 CAY CAY C 0 1 Y N N -0.037 12.770 29.867 0.082 2.295 -0.277 CAY 4A2 21 4A2 NAZ NAZ N 0 1 N N N -1.032 12.450 29.038 -1.000 1.416 -0.293 NAZ 4A2 22 4A2 CBA CBA C 0 1 N N N -1.004 11.125 28.787 -0.515 0.150 -0.495 CBA 4A2 23 4A2 NBB NBB N 0 1 N N N -1.874 10.493 27.994 -1.242 -0.943 -0.575 NBB 4A2 24 4A2 CBC CBC C 0 1 Y N N -3.053 11.009 27.587 -2.588 -0.891 -0.327 CBC 4A2 25 4A2 CBD CBD C 0 1 Y N N -3.954 11.542 28.507 -3.483 -1.546 -1.176 CBD 4A2 26 4A2 CBE CBE C 0 1 Y N N -5.169 12.060 28.056 -4.839 -1.490 -0.922 CBE 4A2 27 4A2 FBF FBF F 0 1 N N N -6.047 12.561 28.952 -5.706 -2.124 -1.741 FBF 4A2 28 4A2 CAS CAS C 0 1 Y N N -5.510 12.053 26.697 -5.313 -0.783 0.177 CAS 4A2 29 4A2 OAT OAT O 0 1 N N N -6.699 12.556 26.214 -6.649 -0.730 0.425 OAT 4A2 30 4A2 CAU CAU C 0 1 N N N -7.802 11.669 26.515 -7.068 0.014 1.571 CAU 4A2 31 4A2 CAR CAR C 0 1 Y N N -4.597 11.524 25.781 -4.427 -0.132 1.022 CAR 4A2 32 4A2 CAQ CAQ C 0 1 Y N N -3.382 11.008 26.229 -3.069 -0.187 0.779 CAQ 4A2 33 4A2 HAE HAE H 0 1 N N N 0.796 5.960 32.890 4.014 -3.994 1.827 HAE 4A2 34 4A2 HAF HAF H 0 1 N N N -1.476 6.476 33.717 2.960 -3.165 3.892 HAF 4A2 35 4A2 HAK HAK H 0 1 N N N -2.807 8.229 32.609 1.342 -1.311 3.790 HAK 4A2 36 4A2 HAJ HAJ H 0 1 N N N -1.917 9.465 30.677 0.779 -0.286 1.623 HAJ 4A2 37 4A2 HAH1 HAH1 H 0 0 N N N 1.559 9.161 29.459 2.658 -0.588 -1.301 HAH1 4A2 38 4A2 HAH2 HAH2 H 0 0 N N N 0.073 8.712 28.553 1.249 -1.665 -1.452 HAH2 4A2 39 4A2 HAN HAN H 0 1 N N N 2.305 10.693 31.177 3.377 1.569 -0.648 HAN 4A2 40 4A2 HAM HAM H 0 1 N N N 3.059 12.835 32.198 3.546 4.001 -0.364 HAM 4A2 41 4A2 HAX HAX H 0 1 N N N -0.157 14.888 30.227 -0.721 4.255 0.032 HAX 4A2 42 4A2 HAL HAL H 0 1 N N N 1.648 17.044 32.365 2.752 7.306 0.108 HAL 4A2 43 4A2 HAZ HAZ H 0 1 N N N -1.697 13.094 28.660 -1.933 1.658 -0.183 HAZ 4A2 44 4A2 HBD HBD H 0 1 N N N -3.714 11.554 29.560 -3.115 -2.095 -2.030 HBD 4A2 45 4A2 HAQ HAQ H 0 1 N N N -2.683 10.600 25.514 -2.380 0.317 1.440 HAQ 4A2 46 4A2 HAR HAR H 0 1 N N N -4.832 11.515 24.727 -4.799 0.416 1.875 HAR 4A2 47 4A2 HAU1 HAU1 H 0 0 N N N -8.735 12.096 26.118 -8.154 -0.024 1.652 HAU1 4A2 48 4A2 HAU2 HAU2 H 0 0 N N N -7.621 10.688 26.051 -6.621 -0.417 2.467 HAU2 4A2 49 4A2 HAU3 HAU3 H 0 0 N N N -7.888 11.548 27.605 -6.748 1.051 1.468 HAU3 4A2 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4A2 FAA CAC SING N N 1 4A2 CAC FAB SING N N 2 4A2 CAC FAG SING N N 3 4A2 CAC CAD SING N N 4 4A2 CAD CAE SING Y N 5 4A2 CAD CAI DOUB Y N 6 4A2 CAE CAF DOUB Y N 7 4A2 CAF CAK SING Y N 8 4A2 CAK CAJ DOUB Y N 9 4A2 CAJ CAI SING Y N 10 4A2 CAI CAH SING N N 11 4A2 CAH NAP SING N N 12 4A2 NAP CAO SING N N 13 4A2 NAP CBA SING N N 14 4A2 CAO CAN SING Y N 15 4A2 CAO CAY DOUB Y N 16 4A2 CAN CAM DOUB Y N 17 4A2 CAM CAW SING Y N 18 4A2 CAW CAV SING N N 19 4A2 CAW CAX DOUB Y N 20 4A2 CAV OAL SING N N 21 4A2 CAV OBG DOUB N N 22 4A2 CAX CAY SING Y N 23 4A2 CAY NAZ SING N N 24 4A2 NAZ CBA SING N N 25 4A2 CBA NBB DOUB N N 26 4A2 NBB CBC SING N N 27 4A2 CBC CBD SING Y N 28 4A2 CBC CAQ DOUB Y N 29 4A2 CBD CBE DOUB Y N 30 4A2 CBE FBF SING N N 31 4A2 CBE CAS SING Y N 32 4A2 CAS OAT SING N N 33 4A2 CAS CAR DOUB Y N 34 4A2 OAT CAU SING N N 35 4A2 CAR CAQ SING Y N 36 4A2 CAE HAE SING N N 37 4A2 CAF HAF SING N N 38 4A2 CAK HAK SING N N 39 4A2 CAJ HAJ SING N N 40 4A2 CAH HAH1 SING N N 41 4A2 CAH HAH2 SING N N 42 4A2 CAN HAN SING N N 43 4A2 CAM HAM SING N N 44 4A2 CAX HAX SING N N 45 4A2 OAL HAL SING N N 46 4A2 NAZ HAZ SING N N 47 4A2 CBD HBD SING N N 48 4A2 CAQ HAQ SING N N 49 4A2 CAR HAR SING N N 50 4A2 CAU HAU1 SING N N 51 4A2 CAU HAU2 SING N N 52 4A2 CAU HAU3 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4A2 SMILES ACDLabs 12.01 "FC(F)(F)c1ccccc1CN4c2ccc(cc2N\C4=N/c3ccc(OC)c(F)c3)C(=O)O" 4A2 InChI InChI 1.03 "InChI=1S/C23H17F4N3O3/c1-33-20-9-7-15(11-17(20)24)28-22-29-18-10-13(21(31)32)6-8-19(18)30(22)12-14-4-2-3-5-16(14)23(25,26)27/h2-11H,12H2,1H3,(H,28,29)(H,31,32)" 4A2 InChIKey InChI 1.03 KSDBWRGNYBMBEZ-UHFFFAOYSA-N 4A2 SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1F)N=C2Nc3cc(ccc3N2Cc4ccccc4C(F)(F)F)C(O)=O" 4A2 SMILES CACTVS 3.385 "COc1ccc(cc1F)N=C2Nc3cc(ccc3N2Cc4ccccc4C(F)(F)F)C(O)=O" 4A2 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COc1ccc(cc1F)/N=C/2\Nc3cc(ccc3N2Cc4ccccc4C(F)(F)F)C(=O)O" 4A2 SMILES "OpenEye OEToolkits" 1.9.2 "COc1ccc(cc1F)N=C2Nc3cc(ccc3N2Cc4ccccc4C(F)(F)F)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 4A2 "SYSTEMATIC NAME" ACDLabs 12.01 "(2E)-2-[(3-fluoro-4-methoxyphenyl)imino]-1-[2-(trifluoromethyl)benzyl]-2,3-dihydro-1H-benzimidazole-5-carboxylic acid" 4A2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(2E)-2-(3-fluoranyl-4-methoxy-phenyl)imino-1-[[2-(trifluoromethyl)phenyl]methyl]-3H-benzimidazole-5-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4A2 "Create component" 2012-11-23 EBI 4A2 "Initial release" 2013-01-18 RCSB 4A2 "Modify descriptor" 2014-09-05 RCSB #