data_4D8 # _chem_comp.id 4D8 _chem_comp.name "(3beta,4alpha,5beta,14beta)-3-hydroxy-4-methylcholesta-8,24-diene-4-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H46 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 4alpha-carboxy-4beta-methyl-zymosterol _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-01-29 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 442.674 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4D8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4S15 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4D8 O3 O3 O 0 1 N N N 18.269 24.359 34.418 -6.835 -1.465 -0.023 O3 4D8 1 4D8 OC1 OC1 O 0 1 N N N 15.140 24.949 32.491 -5.246 2.214 0.732 OC1 4D8 2 4D8 OC2 OC2 O 0 1 N N N 15.650 26.810 33.527 -7.155 1.306 0.086 OC2 4D8 3 4D8 C13 C13 C 0 1 N N R 10.971 22.042 37.677 1.524 -0.094 0.426 C13 4D8 4 4D8 C14 C14 C 0 1 N N R 11.109 22.633 36.293 0.592 1.069 0.745 C14 4D8 5 4D8 C10 C10 C 0 1 N N S 14.845 23.131 36.355 -2.642 -0.852 -0.125 C10 4D8 6 4D8 C17 C17 C 0 1 N N R 9.501 21.628 37.649 2.891 0.499 0.766 C17 4D8 7 4D8 C5 C5 C 0 1 N N R 14.725 24.276 35.358 -3.555 0.352 -0.040 C5 4D8 8 4D8 C8 C8 C 0 1 N N N 12.410 23.306 36.180 -0.808 0.736 0.288 C8 4D8 9 4D8 C9 C9 C 0 1 N N N 13.437 22.594 36.437 -1.239 -0.493 0.333 C9 4D8 10 4D8 C12 C12 C 0 1 N N N 12.062 20.979 37.780 1.024 -1.222 1.330 C12 4D8 11 4D8 C15 C15 C 0 1 N N N 9.888 23.516 36.099 1.307 2.247 0.071 C15 4D8 12 4D8 C16 C16 C 0 1 N N N 8.809 22.750 36.858 2.780 1.981 0.413 C16 4D8 13 4D8 C11 C11 C 0 1 N N N 13.239 21.205 36.813 -0.364 -1.616 0.835 C11 4D8 14 4D8 C4 C4 C 0 1 N N S 16.021 24.835 34.794 -5.021 0.096 -0.315 C4 4D8 15 4D8 C6 C6 C 0 1 N N N 13.827 25.361 35.926 -2.952 1.465 -0.896 C6 4D8 16 4D8 C7 C7 C 0 1 N N N 12.431 24.794 35.772 -1.655 1.883 -0.205 C7 4D8 17 4D8 C1 C1 C 0 1 N N N 15.756 22.028 35.847 -3.188 -2.005 0.716 C1 4D8 18 4D8 C20 C20 C 0 1 N N R 8.815 21.402 38.998 3.978 -0.169 -0.078 C20 4D8 19 4D8 C18 C18 C 0 1 N N N 11.159 23.117 38.749 1.477 -0.493 -1.049 C18 4D8 20 4D8 C3 C3 C 0 1 N N S 16.999 23.731 34.410 -5.522 -1.135 0.442 C3 4D8 21 4D8 C2 C2 C 0 1 N N N 17.099 22.562 35.380 -4.607 -2.339 0.258 C2 4D8 22 4D8 C19 C19 C 0 1 N N N 15.249 23.563 37.758 -2.493 -1.347 -1.563 C19 4D8 23 4D8 C4B C4B C 0 1 N N N 16.700 25.838 35.727 -5.334 -0.036 -1.804 C4B 4D8 24 4D8 C22 C22 C 0 1 N N N 7.324 21.135 38.799 5.318 0.527 0.171 C22 4D8 25 4D8 C4A C4A C 0 1 N N N 15.594 25.593 33.561 -5.818 1.287 0.208 C4A 4D8 26 4D8 C21 C21 C 0 1 N N N 9.402 20.251 39.809 4.091 -1.645 0.312 C21 4D8 27 4D8 C23 C23 C 0 1 N N N 7.067 20.029 37.776 6.379 -0.058 -0.762 C23 4D8 28 4D8 C24 C24 C 0 1 N N N 5.792 19.298 38.114 7.698 0.628 -0.517 C24 4D8 29 4D8 C25 C25 C 0 1 N N N 4.850 19.060 37.190 8.768 -0.083 -0.258 C25 4D8 30 4D8 C26 C26 C 0 1 N N N 5.010 19.531 35.776 10.046 0.602 0.151 C26 4D8 31 4D8 C27 C27 C 0 1 N N N 3.608 18.326 37.588 8.720 -1.585 -0.371 C27 4D8 32 4D8 H1 H1 H 0 1 N N N 18.938 23.725 34.185 -7.223 -2.238 0.410 H1 4D8 33 4D8 H2 H2 H 0 1 N N N 15.339 27.118 32.684 -7.616 2.083 0.432 H2 4D8 34 4D8 H3 H3 H 0 1 N N N 11.064 21.815 35.559 0.578 1.232 1.826 H3 4D8 35 4D8 H4 H4 H 0 1 N N N 9.418 20.700 37.065 3.102 0.373 1.826 H4 4D8 36 4D8 H5 H5 H 0 1 N N N 14.181 23.862 34.496 -3.493 0.715 1.019 H5 4D8 37 4D8 H6 H6 H 0 1 N N N 11.614 19.999 37.559 1.703 -2.077 1.269 H6 4D8 38 4D8 H7 H7 H 0 1 N N N 12.452 20.980 38.808 0.973 -0.876 2.366 H7 4D8 39 4D8 H8 H8 H 0 1 N N N 10.046 24.515 36.531 1.145 2.255 -1.006 H8 4D8 40 4D8 H9 H9 H 0 1 N N N 9.632 23.614 35.034 0.978 3.196 0.504 H9 4D8 41 4D8 H10 H10 H 0 1 N N N 8.285 23.427 37.549 3.083 2.593 1.265 H10 4D8 42 4D8 H11 H11 H 0 1 N N N 8.087 22.318 36.149 3.412 2.211 -0.446 H11 4D8 43 4D8 H12 H12 H 0 1 N N N 13.052 20.623 35.899 -0.885 -2.103 1.668 H12 4D8 44 4D8 H13 H13 H 0 1 N N N 14.158 20.843 37.297 -0.258 -2.364 0.049 H13 4D8 45 4D8 H14 H14 H 0 1 N N N 14.059 25.547 36.985 -2.753 1.150 -1.914 H14 4D8 46 4D8 H15 H15 H 0 1 N N N 13.935 26.296 35.357 -3.627 2.329 -0.924 H15 4D8 47 4D8 H16 H16 H 0 1 N N N 11.738 25.356 36.415 -1.908 2.522 0.643 H16 4D8 48 4D8 H17 H17 H 0 1 N N N 12.115 24.887 34.722 -1.067 2.474 -0.911 H17 4D8 49 4D8 H18 H18 H 0 1 N N N 15.263 21.522 35.004 -2.549 -2.882 0.595 H18 4D8 50 4D8 H19 H19 H 0 1 N N N 15.925 21.306 36.659 -3.201 -1.714 1.768 H19 4D8 51 4D8 H20 H20 H 0 1 N N N 8.919 22.323 39.590 3.719 -0.091 -1.133 H20 4D8 52 4D8 H21 H21 H 0 1 N N N 11.054 22.664 39.746 0.463 -0.796 -1.312 H21 4D8 53 4D8 H22 H22 H 0 1 N N N 12.161 23.561 38.651 1.773 0.356 -1.665 H22 4D8 54 4D8 H23 H23 H 0 1 N N N 10.397 23.900 38.620 2.160 -1.324 -1.223 H23 4D8 55 4D8 H24 H24 H 0 1 N N N 16.751 23.355 33.406 -5.585 -0.891 1.508 H24 4D8 56 4D8 H25 H25 H 0 1 N N N 17.641 21.745 34.882 -4.616 -2.671 -0.775 H25 4D8 57 4D8 H26 H26 H 0 1 N N N 17.665 22.893 36.263 -4.986 -3.164 0.879 H26 4D8 58 4D8 H27 H27 H 0 1 N N N 15.312 22.680 38.410 -1.717 -2.112 -1.605 H27 4D8 59 4D8 H28 H28 H 0 1 N N N 16.229 24.061 37.720 -3.439 -1.770 -1.902 H28 4D8 60 4D8 H29 H29 H 0 1 N N N 14.498 24.261 38.157 -2.217 -0.513 -2.208 H29 4D8 61 4D8 H30 H30 H 0 1 N N N 17.028 25.324 36.643 -4.787 -0.884 -2.217 H30 4D8 62 4D8 H31 H31 H 0 1 N N N 17.572 26.277 35.221 -6.404 -0.194 -1.939 H31 4D8 63 4D8 H32 H32 H 0 1 N N N 15.988 26.635 35.989 -5.034 0.876 -2.321 H32 4D8 64 4D8 H33 H33 H 0 1 N N N 6.842 22.060 38.449 5.213 1.595 -0.022 H33 4D8 65 4D8 H34 H34 H 0 1 N N N 6.886 20.835 39.762 5.620 0.373 1.207 H34 4D8 66 4D8 H35 H35 H 0 1 N N N 8.856 20.155 40.759 4.904 -2.108 -0.247 H35 4D8 67 4D8 H36 H36 H 0 1 N N N 9.310 19.316 39.238 4.294 -1.724 1.380 H36 4D8 68 4D8 H37 H37 H 0 1 N N N 10.464 20.452 40.015 3.155 -2.154 0.081 H37 4D8 69 4D8 H38 H38 H 0 1 N N N 7.908 19.320 37.788 6.483 -1.126 -0.569 H38 4D8 70 4D8 H39 H39 H 0 1 N N N 6.977 20.474 36.774 6.076 0.096 -1.798 H39 4D8 71 4D8 H40 H40 H 0 1 N N N 5.634 18.957 39.127 7.761 1.705 -0.554 H40 4D8 72 4D8 H41 H41 H 0 1 N N N 5.976 20.046 35.668 10.636 0.832 -0.736 H41 4D8 73 4D8 H42 H42 H 0 1 N N N 4.977 18.667 35.096 9.810 1.526 0.680 H42 4D8 74 4D8 H43 H43 H 0 1 N N N 4.194 20.225 35.526 10.617 -0.056 0.806 H43 4D8 75 4D8 H44 H44 H 0 1 N N N 3.664 18.060 38.654 7.749 -1.889 -0.761 H44 4D8 76 4D8 H45 H45 H 0 1 N N N 2.732 18.968 37.416 9.505 -1.924 -1.046 H45 4D8 77 4D8 H46 H46 H 0 1 N N N 3.515 17.410 36.986 8.871 -2.028 0.614 H46 4D8 78 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4D8 OC1 C4A DOUB N N 1 4D8 OC2 C4A SING N N 2 4D8 C4A C4 SING N N 3 4D8 C3 O3 SING N N 4 4D8 C3 C4 SING N N 5 4D8 C3 C2 SING N N 6 4D8 C4 C5 SING N N 7 4D8 C4 C4B SING N N 8 4D8 C5 C6 SING N N 9 4D8 C5 C10 SING N N 10 4D8 C2 C1 SING N N 11 4D8 C7 C6 SING N N 12 4D8 C7 C8 SING N N 13 4D8 C26 C25 SING N N 14 4D8 C1 C10 SING N N 15 4D8 C15 C14 SING N N 16 4D8 C15 C16 SING N N 17 4D8 C8 C14 SING N N 18 4D8 C8 C9 DOUB N N 19 4D8 C14 C13 SING N N 20 4D8 C10 C9 SING N N 21 4D8 C10 C19 SING N N 22 4D8 C9 C11 SING N N 23 4D8 C11 C12 SING N N 24 4D8 C16 C17 SING N N 25 4D8 C25 C27 SING N N 26 4D8 C25 C24 DOUB N N 27 4D8 C17 C13 SING N N 28 4D8 C17 C20 SING N N 29 4D8 C13 C12 SING N N 30 4D8 C13 C18 SING N N 31 4D8 C23 C24 SING N N 32 4D8 C23 C22 SING N N 33 4D8 C22 C20 SING N N 34 4D8 C20 C21 SING N N 35 4D8 O3 H1 SING N N 36 4D8 OC2 H2 SING N N 37 4D8 C14 H3 SING N N 38 4D8 C17 H4 SING N N 39 4D8 C5 H5 SING N N 40 4D8 C12 H6 SING N N 41 4D8 C12 H7 SING N N 42 4D8 C15 H8 SING N N 43 4D8 C15 H9 SING N N 44 4D8 C16 H10 SING N N 45 4D8 C16 H11 SING N N 46 4D8 C11 H12 SING N N 47 4D8 C11 H13 SING N N 48 4D8 C6 H14 SING N N 49 4D8 C6 H15 SING N N 50 4D8 C7 H16 SING N N 51 4D8 C7 H17 SING N N 52 4D8 C1 H18 SING N N 53 4D8 C1 H19 SING N N 54 4D8 C20 H20 SING N N 55 4D8 C18 H21 SING N N 56 4D8 C18 H22 SING N N 57 4D8 C18 H23 SING N N 58 4D8 C3 H24 SING N N 59 4D8 C2 H25 SING N N 60 4D8 C2 H26 SING N N 61 4D8 C19 H27 SING N N 62 4D8 C19 H28 SING N N 63 4D8 C19 H29 SING N N 64 4D8 C4B H30 SING N N 65 4D8 C4B H31 SING N N 66 4D8 C4B H32 SING N N 67 4D8 C22 H33 SING N N 68 4D8 C22 H34 SING N N 69 4D8 C21 H35 SING N N 70 4D8 C21 H36 SING N N 71 4D8 C21 H37 SING N N 72 4D8 C23 H38 SING N N 73 4D8 C23 H39 SING N N 74 4D8 C24 H40 SING N N 75 4D8 C26 H41 SING N N 76 4D8 C26 H42 SING N N 77 4D8 C26 H43 SING N N 78 4D8 C27 H44 SING N N 79 4D8 C27 H45 SING N N 80 4D8 C27 H46 SING N N 81 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4D8 SMILES ACDLabs 12.01 "O=C(O)C1(C2CCC3=C(C2(CCC1O)C)CCC4(C)C(C(C)CC\C=C(/C)C)CCC34)C" 4D8 InChI InChI 1.03 "InChI=1S/C29H46O3/c1-18(2)8-7-9-19(3)21-11-12-22-20-10-13-24-28(5,23(20)14-16-27(21,22)4)17-15-25(30)29(24,6)26(31)32/h8,19,21-22,24-25,30H,7,9-17H2,1-6H3,(H,31,32)/t19-,21-,22+,24-,25+,27-,28-,29+/m1/s1" 4D8 InChIKey InChI 1.03 MYWAIWDQTCHPTH-LJAIZBFVSA-N 4D8 SMILES_CANONICAL CACTVS 3.385 "C[C@H](CCC=C(C)C)[C@H]1CC[C@H]2C3=C(CC[C@]12C)[C@@]4(C)CC[C@H](O)[C@](C)([C@@H]4CC3)C(O)=O" 4D8 SMILES CACTVS 3.385 "C[CH](CCC=C(C)C)[CH]1CC[CH]2C3=C(CC[C]12C)[C]4(C)CC[CH](O)[C](C)([CH]4CC3)C(O)=O" 4D8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H](CCC=C(C)C)[C@H]1CC[C@@H]2[C@@]1(CCC3=C2CC[C@@H]4[C@@]3(CC[C@@H]([C@@]4(C)C(=O)O)O)C)C" 4D8 SMILES "OpenEye OEToolkits" 1.7.6 "CC(CCC=C(C)C)C1CCC2C1(CCC3=C2CCC4C3(CCC(C4(C)C(=O)O)O)C)C" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 4D8 "SYSTEMATIC NAME" ACDLabs 12.01 "(3beta,4alpha,5beta,14beta)-3-hydroxy-4-methylcholesta-8,24-diene-4-carboxylic acid" 4D8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(3S,4S,5R,10S,13R,14R,17R)-4,10,13-trimethyl-17-[(2R)-6-methylhept-5-en-2-yl]-3-oxidanyl-1,2,3,5,6,7,11,12,14,15,16,17-dodecahydrocyclopenta[a]phenanthrene-4-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4D8 "Create component" 2015-01-29 RCSB 4D8 "Initial release" 2015-02-11 RCSB 4D8 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 4D8 _pdbx_chem_comp_synonyms.name 4alpha-carboxy-4beta-methyl-zymosterol _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##