data_4YB # _chem_comp.id 4YB _chem_comp.name "5'-O-{[4-(2-carboxyphenyl)-4-oxobutanoyl]sulfamoyl}adenosine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H22 N6 O10 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-06-22 _chem_comp.pdbx_modified_date 2015-10-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 550.499 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4YB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5C5H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4YB C1 C4 C 0 1 Y N N 98.161 -23.551 -16.821 -3.922 2.638 0.235 C1 4YB 1 4YB C2 C5 C 0 1 Y N N 97.235 -23.883 -17.722 -3.021 3.659 -0.112 C2 4YB 2 4YB C3 C6 C 0 1 Y N N 96.003 -24.216 -17.321 -3.429 4.992 0.063 C3 4YB 3 4YB C4 C8 C 0 1 Y N N 99.079 -23.440 -18.762 -2.040 1.767 -0.516 C4 4YB 4 4YB N1 N1 N 0 1 Y N N 95.641 -24.223 -16.028 -4.645 5.223 0.547 N1 4YB 5 4YB N2 N3 N 0 1 Y N N 97.878 -23.538 -15.515 -5.118 2.967 0.712 N2 4YB 6 4YB O1 OAH O 0 1 N N N 97.793 -22.731 -28.010 6.832 -0.031 -1.687 O1 4YB 7 4YB C5 CAG C 0 1 N N N 97.748 -22.771 -26.759 6.578 1.142 -1.498 C5 4YB 8 4YB O2 OAI O 0 1 N N N 97.903 -23.863 -26.164 6.695 2.027 -2.507 O2 4YB 9 4YB C6 CAE C 0 1 Y N N 97.450 -21.603 -26.044 6.140 1.597 -0.162 C6 4YB 10 4YB C7 CAF C 0 1 Y N N 96.203 -21.038 -26.311 6.814 2.630 0.482 C7 4YB 11 4YB C8 CAA C 0 1 Y N N 95.795 -19.869 -25.666 6.401 3.053 1.732 C8 4YB 12 4YB C9 CAB C 0 1 Y N N 96.628 -19.259 -24.741 5.318 2.456 2.352 C9 4YB 13 4YB C10 CAC C 0 1 Y N N 97.869 -19.820 -24.460 4.633 1.429 1.729 C10 4YB 14 4YB C11 CAD C 0 1 Y N N 98.301 -21.000 -25.094 5.031 0.993 0.466 C11 4YB 15 4YB C12 CAJ C 0 1 N N N 99.569 -21.523 -24.795 4.302 -0.097 -0.206 C12 4YB 16 4YB O3 OAL O 0 1 N N N 100.264 -22.039 -25.675 4.582 -0.401 -1.346 O3 4YB 17 4YB C13 CAK C 0 1 N N N 100.102 -21.366 -23.350 3.210 -0.835 0.525 C13 4YB 18 4YB C14 CAM C 0 1 N N N 101.560 -21.802 -23.268 2.620 -1.909 -0.391 C14 4YB 19 4YB C15 CAN C 0 1 N N N 102.224 -21.372 -21.940 1.527 -2.646 0.339 C15 4YB 20 4YB O4 OAS O 0 1 N N N 101.633 -20.755 -21.061 1.247 -2.342 1.479 O4 4YB 21 4YB N3 NAO N 0 1 N N N 103.485 -21.776 -21.826 0.860 -3.644 -0.275 N3 4YB 22 4YB S1 SAP S 0 1 N N N 104.324 -21.321 -20.556 -0.341 -4.454 0.527 S1 4YB 23 4YB O5 OAT O 0 1 N N N 104.491 -19.816 -20.694 -0.863 -5.406 -0.389 O5 4YB 24 4YB O6 OAU O 0 1 N N N 105.679 -21.979 -20.634 0.192 -4.807 1.796 O6 4YB 25 4YB O7 O5* O 0 1 N N N 103.674 -21.647 -19.209 -1.459 -3.455 0.792 O7 4YB 26 4YB C16 C5* C 0 1 N N N 103.188 -22.949 -19.037 -2.238 -3.135 -0.362 C16 4YB 27 4YB C17 C4* C 0 1 N N R 102.619 -22.964 -17.640 -3.325 -2.128 0.021 C17 4YB 28 4YB O8 O4* O 0 1 N N N 101.396 -22.215 -17.664 -2.738 -0.844 0.323 O8 4YB 29 4YB C18 C3* C 0 1 N N S 102.180 -24.354 -17.308 -4.258 -1.862 -1.181 C18 4YB 30 4YB O9 O3* O 0 1 N N N 103.301 -25.093 -16.863 -5.450 -2.643 -1.073 O9 4YB 31 4YB C19 C2* C 0 1 N N R 101.198 -24.078 -16.184 -4.586 -0.356 -1.076 C19 4YB 32 4YB O10 O2* O 0 1 N N N 101.897 -23.706 -15.012 -5.990 -0.161 -0.899 O10 4YB 33 4YB C20 C1* C 0 1 N N R 100.480 -22.874 -16.732 -3.812 0.109 0.178 C20 4YB 34 4YB N4 N9 N 0 1 Y N N 99.287 -23.284 -17.462 -3.274 1.457 -0.026 N4 4YB 35 4YB N5 N7 N 0 1 Y N N 97.805 -23.816 -18.929 -1.893 3.059 -0.564 N5 4YB 36 4YB C21 C2 C 0 1 Y N N 96.601 -23.871 -15.070 -5.458 4.230 0.859 C21 4YB 37 4YB N6 N6 N 0 1 N N N 95.129 -24.534 -18.258 -2.585 6.039 -0.261 N6 4YB 38 4YB H1 H1 H 0 1 N N N 99.807 -23.291 -19.546 -1.294 1.046 -0.815 H1 4YB 39 4YB H2 H2 H 0 1 N N N 98.043 -24.554 -26.801 6.985 1.681 -3.363 H2 4YB 40 4YB H3 H3 H 0 1 N N N 95.545 -21.511 -27.025 7.661 3.101 0.005 H3 4YB 41 4YB H4 H4 H 0 1 N N N 94.829 -19.439 -25.888 6.928 3.855 2.228 H4 4YB 42 4YB H5 H5 H 0 1 N N N 96.315 -18.354 -24.242 5.004 2.795 3.328 H5 4YB 43 4YB H6 H6 H 0 1 N N N 98.515 -19.340 -23.740 3.789 0.968 2.218 H6 4YB 44 4YB H7 H7 H 0 1 N N N 100.022 -20.311 -23.047 3.622 -1.304 1.417 H7 4YB 45 4YB H8 H8 H 0 1 N N N 99.499 -21.989 -22.672 2.427 -0.132 0.812 H8 4YB 46 4YB H9 H9 H 0 1 N N N 101.607 -22.898 -23.349 2.207 -1.439 -1.284 H9 4YB 47 4YB H10 H10 H 0 1 N N N 102.113 -21.348 -24.104 3.402 -2.611 -0.679 H10 4YB 48 4YB H11 H11 H 0 1 N N N 103.899 -22.356 -22.528 1.083 -3.887 -1.187 H11 4YB 49 4YB H12 H12 H 0 1 N N N 102.405 -23.172 -19.777 -1.594 -2.701 -1.126 H12 4YB 50 4YB H13 H13 H 0 1 N N N 104.002 -23.683 -19.132 -2.702 -4.041 -0.750 H13 4YB 51 4YB H14 H14 H 0 1 N N N 103.340 -22.577 -16.905 -3.899 -2.496 0.872 H14 4YB 52 4YB H15 H15 H 0 1 N N N 101.675 -24.828 -18.163 -3.745 -2.079 -2.118 H15 4YB 53 4YB H16 H16 H 0 1 N N N 103.032 -25.979 -16.649 -6.072 -2.515 -1.802 H16 4YB 54 4YB H17 H17 H 0 1 N N N 100.513 -24.925 -16.029 -4.236 0.174 -1.962 H17 4YB 55 4YB H18 H18 H 0 1 N N N 101.276 -23.535 -14.313 -6.529 -0.491 -1.631 H18 4YB 56 4YB H19 H19 H 0 1 N N N 100.213 -22.193 -15.910 -4.461 0.087 1.054 H19 4YB 57 4YB H20 H20 H 0 1 N N N 96.358 -23.858 -14.018 -6.437 4.463 1.249 H20 4YB 58 4YB H21 H21 H 0 1 N N N 94.250 -24.752 -17.834 -1.699 5.857 -0.613 H21 4YB 59 4YB H22 H22 H 0 1 N N N 95.015 -23.762 -18.883 -2.878 6.955 -0.136 H22 4YB 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4YB O1 C5 DOUB N N 1 4YB C5 O2 SING N N 2 4YB C5 C6 SING N N 3 4YB C7 C6 DOUB Y N 4 4YB C7 C8 SING Y N 5 4YB C6 C11 SING Y N 6 4YB O3 C12 DOUB N N 7 4YB C8 C9 DOUB Y N 8 4YB C11 C12 SING N N 9 4YB C11 C10 DOUB Y N 10 4YB C12 C13 SING N N 11 4YB C9 C10 SING Y N 12 4YB C13 C14 SING N N 13 4YB C14 C15 SING N N 14 4YB C15 N3 SING N N 15 4YB C15 O4 DOUB N N 16 4YB N3 S1 SING N N 17 4YB O5 S1 DOUB N N 18 4YB O6 S1 DOUB N N 19 4YB S1 O7 SING N N 20 4YB O7 C16 SING N N 21 4YB C16 C17 SING N N 22 4YB N5 C4 DOUB Y N 23 4YB N5 C2 SING Y N 24 4YB C4 N4 SING Y N 25 4YB N6 C3 SING N N 26 4YB C2 C3 DOUB Y N 27 4YB C2 C1 SING Y N 28 4YB O8 C17 SING N N 29 4YB O8 C20 SING N N 30 4YB C17 C18 SING N N 31 4YB N4 C1 SING Y N 32 4YB N4 C20 SING N N 33 4YB C3 N1 SING Y N 34 4YB C18 O9 SING N N 35 4YB C18 C19 SING N N 36 4YB C1 N2 DOUB Y N 37 4YB C20 C19 SING N N 38 4YB C19 O10 SING N N 39 4YB N1 C21 DOUB Y N 40 4YB N2 C21 SING Y N 41 4YB C4 H1 SING N N 42 4YB O2 H2 SING N N 43 4YB C7 H3 SING N N 44 4YB C8 H4 SING N N 45 4YB C9 H5 SING N N 46 4YB C10 H6 SING N N 47 4YB C13 H7 SING N N 48 4YB C13 H8 SING N N 49 4YB C14 H9 SING N N 50 4YB C14 H10 SING N N 51 4YB N3 H11 SING N N 52 4YB C16 H12 SING N N 53 4YB C16 H13 SING N N 54 4YB C17 H14 SING N N 55 4YB C18 H15 SING N N 56 4YB O9 H16 SING N N 57 4YB C19 H17 SING N N 58 4YB O10 H18 SING N N 59 4YB C20 H19 SING N N 60 4YB C21 H20 SING N N 61 4YB N6 H21 SING N N 62 4YB N6 H22 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4YB SMILES ACDLabs 12.01 "c12ncnc(c1ncn2C4OC(COS(NC(CCC(c3c(C(=O)O)cccc3)=O)=O)(=O)=O)C(O)C4O)N" 4YB InChI InChI 1.03 "InChI=1S/C21H22N6O10S/c22-18-15-19(24-8-23-18)27(9-25-15)20-17(31)16(30)13(37-20)7-36-38(34,35)26-14(29)6-5-12(28)10-3-1-2-4-11(10)21(32)33/h1-4,8-9,13,16-17,20,30-31H,5-7H2,(H,26,29)(H,32,33)(H2,22,23,24)/t13-,16-,17-,20-/m1/s1" 4YB InChIKey InChI 1.03 JRKRGBFWNBVHHH-AEVYOOLXSA-N 4YB SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[S](=O)(=O)NC(=O)CCC(=O)c4ccccc4C(O)=O)[C@@H](O)[C@H]3O" 4YB SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[S](=O)(=O)NC(=O)CCC(=O)c4ccccc4C(O)=O)[CH](O)[CH]3O" 4YB SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1ccc(c(c1)C(=O)CCC(=O)NS(=O)(=O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O)C(=O)O" 4YB SMILES "OpenEye OEToolkits" 1.9.2 "c1ccc(c(c1)C(=O)CCC(=O)NS(=O)(=O)OCC2C(C(C(O2)n3cnc4c3ncnc4N)O)O)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 4YB "SYSTEMATIC NAME" ACDLabs 12.01 "5'-O-{[4-(2-carboxyphenyl)-4-oxobutanoyl]sulfamoyl}adenosine" 4YB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-[4-[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxysulfonylamino]-4-oxidanylidene-butanoyl]benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4YB "Create component" 2015-06-22 RCSB 4YB "Modify model coordinates code" 2015-07-03 RCSB 4YB "Initial release" 2015-10-07 RCSB #