data_4YV # _chem_comp.id 4YV _chem_comp.name "1-cyclopentyl-N-[2-(4-methoxypiperidin-1-yl)pyrimidin-4-yl]-1H-imidazo[4,5-c]pyridin-6-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H27 N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-06-26 _chem_comp.pdbx_modified_date 2015-10-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 393.485 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 4YV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5C8K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 4YV C4 C1 C 0 1 N N N -51.542 -2.357 -28.072 5.890 -0.561 -0.923 C4 4YV 1 4YV C5 C2 C 0 1 N N N -52.837 -1.618 -27.715 5.117 0.702 -0.536 C5 4YV 2 4YV C11 C3 C 0 1 Y N N -56.155 0.428 -26.529 2.883 3.813 0.112 C11 4YV 3 4YV C7 C4 C 0 1 N N N -52.000 -1.311 -25.307 3.465 -0.606 0.660 C7 4YV 4 4YV C8 C5 C 0 1 N N N -50.672 -1.957 -25.708 4.189 -1.908 0.309 C8 4YV 5 4YV C9 C6 C 0 1 Y N N -54.130 -0.580 -25.965 2.944 1.527 -0.181 C9 4YV 6 4YV C12 C7 C 0 1 Y N N -56.064 1.249 -25.421 1.511 3.751 0.258 C12 4YV 7 4YV C13 C8 C 0 1 Y N N -54.945 1.122 -24.588 0.887 2.505 0.177 C13 4YV 8 4YV C3 C9 C 0 1 N N N -50.398 -1.774 -27.215 5.686 -1.628 0.156 C3 4YV 9 4YV C1 C10 C 0 1 N N N -48.666 -3.560 -27.350 6.824 -3.612 0.874 C1 4YV 10 4YV O2 O1 O 0 1 N N N -49.071 -2.198 -27.594 6.359 -2.829 -0.228 O2 4YV 11 4YV N6 N1 N 0 1 N N N -53.133 -1.519 -26.251 3.690 0.382 -0.402 N6 4YV 12 4YV N10 N2 N 0 1 Y N N -55.198 -0.459 -26.763 3.562 2.696 -0.104 N10 4YV 13 4YV N14 N3 N 0 1 Y N N -54.011 0.214 -24.893 1.632 1.424 -0.036 N14 4YV 14 4YV N15 N4 N 0 1 N N N -54.868 1.950 -23.471 -0.488 2.395 0.318 N15 4YV 15 4YV C16 C11 C 0 1 Y N N -54.205 1.688 -22.269 -1.112 1.163 0.127 C16 4YV 16 4YV C17 C12 C 0 1 Y N N -53.206 0.713 -22.166 -2.496 1.087 0.162 C17 4YV 17 4YV C18 C13 C 0 1 Y N N -52.573 0.514 -20.941 -3.103 -0.146 -0.030 C18 4YV 18 4YV C19 C14 C 0 1 Y N N -52.944 1.346 -19.853 -2.287 -1.274 -0.254 C19 4YV 19 4YV C20 C15 C 0 1 Y N N -53.941 2.318 -20.045 -0.903 -1.108 -0.275 C20 4YV 20 4YV N21 N5 N 0 1 Y N N -54.533 2.451 -21.222 -0.372 0.083 -0.092 N21 4YV 21 4YV N22 N6 N 0 1 Y N N -52.179 0.968 -18.794 -3.118 -2.336 -0.408 N22 4YV 22 4YV C23 C16 C 0 1 Y N N -51.390 -0.003 -19.152 -4.354 -1.943 -0.296 C23 4YV 23 4YV N24 N7 N 0 1 Y N N -51.588 -0.331 -20.467 -4.400 -0.601 -0.062 N24 4YV 24 4YV C25 C17 C 0 1 N N N -50.864 -1.350 -21.253 -5.608 0.207 0.121 C25 4YV 25 4YV C26 C18 C 0 1 N N N -49.855 -0.672 -22.206 -6.530 0.065 -1.107 C26 4YV 26 4YV C27 C19 C 0 1 N N N -48.617 -0.441 -21.311 -7.536 -1.041 -0.702 C27 4YV 27 4YV C28 C20 C 0 1 N N N -48.542 -1.771 -20.515 -7.786 -0.743 0.798 C28 4YV 28 4YV C29 C21 C 0 1 N N N -49.998 -2.285 -20.389 -6.407 -0.307 1.332 C29 4YV 29 4YV H1 H1 H 0 1 N N N -51.656 -3.430 -27.860 5.522 -0.934 -1.879 H1 4YV 30 4YV H2 H2 H 0 1 N N N -51.316 -2.216 -29.139 6.951 -0.326 -1.007 H2 4YV 31 4YV H3 H3 H 0 1 N N N -52.768 -0.597 -28.118 5.495 1.083 0.413 H3 4YV 32 4YV H4 H4 H 0 1 N N N -53.674 -2.146 -28.196 5.249 1.459 -1.309 H4 4YV 33 4YV H5 H5 H 0 1 N N N -56.999 0.508 -27.199 3.396 4.761 0.169 H5 4YV 34 4YV H6 H6 H 0 1 N N N -51.834 -0.228 -25.213 2.397 -0.799 0.756 H6 4YV 35 4YV H7 H7 H 0 1 N N N -52.294 -1.723 -24.330 3.851 -0.219 1.604 H7 4YV 36 4YV H8 H8 H 0 1 N N N -50.712 -3.032 -25.478 4.034 -2.636 1.106 H8 4YV 37 4YV H9 H9 H 0 1 N N N -49.858 -1.489 -25.135 3.794 -2.303 -0.627 H9 4YV 38 4YV H10 H10 H 0 1 N N N -56.837 1.971 -25.203 0.933 4.648 0.430 H10 4YV 39 4YV H11 H11 H 0 1 N N N -50.435 -0.688 -27.385 6.089 -1.271 1.103 H11 4YV 40 4YV H12 H12 H 0 1 N N N -47.633 -3.704 -27.699 7.526 -3.025 1.466 H12 4YV 41 4YV H13 H13 H 0 1 N N N -48.721 -3.771 -26.272 5.978 -3.903 1.496 H13 4YV 42 4YV H14 H14 H 0 1 N N N -49.335 -4.244 -27.892 7.323 -4.506 0.499 H14 4YV 43 4YV H15 H15 H 0 1 N N N -55.339 2.830 -23.536 -1.015 3.175 0.550 H15 4YV 44 4YV H16 H16 H 0 1 N N N -52.929 0.122 -23.026 -3.091 1.972 0.337 H16 4YV 45 4YV H17 H17 H 0 1 N N N -54.227 2.962 -19.226 -0.263 -1.961 -0.445 H17 4YV 46 4YV H18 H18 H 0 1 N N N -50.676 -0.485 -18.501 -5.217 -2.587 -0.377 H18 4YV 47 4YV H19 H19 H 0 1 N N N -51.573 -1.950 -21.842 -5.339 1.253 0.268 H19 4YV 48 4YV H20 H20 H 0 1 N N N -50.251 0.282 -22.584 -7.052 1.002 -1.302 H20 4YV 49 4YV H21 H21 H 0 1 N N N -49.611 -1.330 -23.053 -5.957 -0.243 -1.981 H21 4YV 50 4YV H22 H22 H 0 1 N N N -47.711 -0.285 -21.915 -8.460 -0.952 -1.273 H22 4YV 51 4YV H23 H23 H 0 1 N N N -48.763 0.419 -20.640 -7.095 -2.030 -0.830 H23 4YV 52 4YV H24 H24 H 0 1 N N N -47.925 -2.504 -21.055 -8.511 0.063 0.910 H24 4YV 53 4YV H25 H25 H 0 1 N N N -48.113 -1.594 -19.518 -8.129 -1.640 1.313 H25 4YV 54 4YV H26 H26 H 0 1 N N N -50.326 -2.246 -19.340 -5.895 -1.157 1.783 H26 4YV 55 4YV H27 H27 H 0 1 N N N -50.070 -3.319 -20.757 -6.525 0.490 2.066 H27 4YV 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4YV C4 C5 SING N N 1 4YV C4 C3 SING N N 2 4YV C5 N6 SING N N 3 4YV O2 C1 SING N N 4 4YV O2 C3 SING N N 5 4YV C3 C8 SING N N 6 4YV N10 C11 DOUB Y N 7 4YV N10 C9 SING Y N 8 4YV C11 C12 SING Y N 9 4YV N6 C9 SING N N 10 4YV N6 C7 SING N N 11 4YV C9 N14 DOUB Y N 12 4YV C8 C7 SING N N 13 4YV C12 C13 DOUB Y N 14 4YV N14 C13 SING Y N 15 4YV C13 N15 SING N N 16 4YV N15 C16 SING N N 17 4YV C16 C17 DOUB Y N 18 4YV C16 N21 SING Y N 19 4YV C26 C27 SING N N 20 4YV C26 C25 SING N N 21 4YV C17 C18 SING Y N 22 4YV C27 C28 SING N N 23 4YV C25 N24 SING N N 24 4YV C25 C29 SING N N 25 4YV N21 C20 DOUB Y N 26 4YV C18 N24 SING Y N 27 4YV C18 C19 DOUB Y N 28 4YV C28 C29 SING N N 29 4YV N24 C23 SING Y N 30 4YV C20 C19 SING Y N 31 4YV C19 N22 SING Y N 32 4YV C23 N22 DOUB Y N 33 4YV C4 H1 SING N N 34 4YV C4 H2 SING N N 35 4YV C5 H3 SING N N 36 4YV C5 H4 SING N N 37 4YV C11 H5 SING N N 38 4YV C7 H6 SING N N 39 4YV C7 H7 SING N N 40 4YV C8 H8 SING N N 41 4YV C8 H9 SING N N 42 4YV C12 H10 SING N N 43 4YV C3 H11 SING N N 44 4YV C1 H12 SING N N 45 4YV C1 H13 SING N N 46 4YV C1 H14 SING N N 47 4YV N15 H15 SING N N 48 4YV C17 H16 SING N N 49 4YV C20 H17 SING N N 50 4YV C23 H18 SING N N 51 4YV C25 H19 SING N N 52 4YV C26 H20 SING N N 53 4YV C26 H21 SING N N 54 4YV C27 H22 SING N N 55 4YV C27 H23 SING N N 56 4YV C28 H24 SING N N 57 4YV C28 H25 SING N N 58 4YV C29 H26 SING N N 59 4YV C29 H27 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 4YV SMILES ACDLabs 12.01 "C1CN(CCC1OC)c2nc(ccn2)Nc4cc3n(cnc3cn4)C5CCCC5" 4YV InChI InChI 1.03 "InChI=1S/C21H27N7O/c1-29-16-7-10-27(11-8-16)21-22-9-6-19(26-21)25-20-12-18-17(13-23-20)24-14-28(18)15-4-2-3-5-15/h6,9,12-16H,2-5,7-8,10-11H2,1H3,(H,22,23,25,26)" 4YV InChIKey InChI 1.03 HVRZVMCNHMWTOQ-UHFFFAOYSA-N 4YV SMILES_CANONICAL CACTVS 3.385 "COC1CCN(CC1)c2nccc(Nc3cc4n(cnc4cn3)C5CCCC5)n2" 4YV SMILES CACTVS 3.385 "COC1CCN(CC1)c2nccc(Nc3cc4n(cnc4cn3)C5CCCC5)n2" 4YV SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COC1CCN(CC1)c2nccc(n2)Nc3cc4c(cn3)ncn4C5CCCC5" 4YV SMILES "OpenEye OEToolkits" 1.9.2 "COC1CCN(CC1)c2nccc(n2)Nc3cc4c(cn3)ncn4C5CCCC5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 4YV "SYSTEMATIC NAME" ACDLabs 12.01 "1-cyclopentyl-N-[2-(4-methoxypiperidin-1-yl)pyrimidin-4-yl]-1H-imidazo[4,5-c]pyridin-6-amine" 4YV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "1-cyclopentyl-N-[2-(4-methoxypiperidin-1-yl)pyrimidin-4-yl]imidazo[4,5-c]pyridin-6-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 4YV "Create component" 2015-06-26 RCSB 4YV "Initial release" 2015-10-28 RCSB #