data_58O # _chem_comp.id 58O _chem_comp.name "6-methoxy-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1H-indole-2-carbonitrile" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H23 F3 N6 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms MI-336 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-08-21 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 500.539 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 58O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5DB1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 58O C4 C1 C 0 1 Y N N -11.056 7.585 12.499 -5.283 -1.550 -0.631 C4 58O 1 58O C5 C2 C 0 1 Y N N -10.773 8.924 12.349 -4.140 -0.861 -0.213 C5 58O 2 58O C6 C3 C 0 1 Y N N -11.839 9.749 11.957 -2.880 -1.403 -0.573 C6 58O 3 58O N1 N1 N 0 1 Y N N -13.052 9.231 11.689 -2.842 -2.523 -1.280 N1 58O 4 58O N3 N2 N 0 1 Y N N -12.285 7.050 12.254 -5.141 -2.673 -1.347 N3 58O 5 58O FAC F1 F 0 1 N N N -5.162 7.651 12.420 -7.441 2.495 -0.534 FAC 58O 6 58O CBI C4 C 0 1 N N N -6.420 7.584 12.133 -6.559 2.886 0.478 CBI 58O 7 58O FAD F2 F 0 1 N N N -6.724 6.332 11.859 -5.333 3.255 -0.087 FAD 58O 8 58O FAE F3 F 0 1 N N N -6.653 8.290 11.072 -7.098 3.975 1.172 FAE 58O 9 58O CAQ C5 C 0 1 N N N -7.240 8.121 13.321 -6.344 1.720 1.446 CAQ 58O 10 58O CAY C6 C 0 1 Y N N -8.700 8.082 12.982 -5.763 0.548 0.698 CAY 58O 11 58O SAW S1 S 0 1 Y N N -9.682 6.754 13.026 -6.719 -0.702 -0.076 SAW 58O 12 58O CAJ C7 C 0 1 Y N N -9.458 9.183 12.631 -4.471 0.332 0.543 CAJ 58O 13 58O C2 C8 C 0 1 Y N N -13.314 7.875 11.853 -3.951 -3.136 -1.651 C2 58O 14 58O NAT N3 N 0 1 N N N -11.647 11.081 11.783 -1.709 -0.771 -0.193 NAT 58O 15 58O CBG C9 C 0 1 N N N -12.721 12.044 11.364 -0.414 -1.341 -0.571 CBG 58O 16 58O CAM C10 C 0 1 N N N -12.623 13.170 12.353 0.641 -0.232 -0.609 CAM 58O 17 58O CAO C11 C 0 1 N N N -13.665 14.252 12.037 2.004 -0.842 -0.945 CAO 58O 18 58O CAL C12 C 0 1 N N N -12.485 12.519 9.962 0.002 -2.395 0.458 CAL 58O 19 58O CAN C13 C 0 1 N N N -13.351 13.771 9.660 1.383 -2.943 0.091 CAN 58O 20 58O NBH N4 N 0 1 N N N -13.231 14.834 10.703 2.357 -1.844 0.069 NBH 58O 21 58O CAP C14 C 0 1 N N N -14.157 15.962 10.291 3.719 -2.351 -0.143 CAP 58O 22 58O CAZ C15 C 0 1 Y N N -14.048 17.190 11.120 4.710 -1.239 0.083 CAZ 58O 23 58O CAI C16 C 0 1 Y N N -15.160 17.727 11.821 5.238 -0.575 -0.985 CAI 58O 24 58O CBC C17 C 0 1 Y N N -15.111 18.847 12.538 6.159 0.460 -0.779 CBC 58O 25 58O CAH C18 C 0 1 Y N N -16.070 19.500 13.272 6.867 1.318 -1.655 CAH 58O 26 58O CAX C19 C 0 1 Y N N -15.474 20.582 13.790 7.635 2.145 -0.895 CAX 58O 27 58O CAF C20 C 0 1 N N N -16.013 21.660 14.663 8.505 3.164 -1.398 CAF 58O 28 58O NAB N5 N 0 1 N N N -16.422 22.455 15.308 9.195 3.974 -1.797 NAB 58O 29 58O NAU N6 N 0 1 Y N N -14.193 20.632 13.409 7.441 1.843 0.440 NAU 58O 30 58O CBD C21 C 0 1 Y N N -13.955 19.556 12.640 6.536 0.810 0.533 CBD 58O 31 58O CAK C22 C 0 1 Y N N -12.843 19.145 11.993 5.989 0.121 1.610 CAK 58O 32 58O CBA C23 C 0 1 Y N N -12.881 17.954 11.218 5.076 -0.893 1.383 CBA 58O 33 58O OAV O1 O 0 1 N N N -11.822 17.442 10.530 4.537 -1.562 2.436 OAV 58O 34 58O CAA C24 C 0 1 N N N -10.528 18.042 10.644 4.953 -1.160 3.742 CAA 58O 35 58O H1 H1 H 0 1 N N N -7.053 7.497 14.207 -5.656 2.025 2.235 H1 58O 36 58O H2 H2 H 0 1 N N N -6.941 9.158 13.533 -7.299 1.434 1.887 H2 58O 37 58O H3 H3 H 0 1 N N N -9.042 10.179 12.582 -3.718 0.991 0.948 H3 58O 38 58O H4 H4 H 0 1 N N N -14.301 7.477 11.670 -3.877 -4.047 -2.227 H4 58O 39 58O H5 H5 H 0 1 N N N -10.928 11.162 11.093 -1.746 0.048 0.324 H5 58O 40 58O H6 H6 H 0 1 N N N -13.707 11.563 11.438 -0.492 -1.803 -1.556 H6 58O 41 58O H7 H7 H 0 1 N N N -12.802 12.779 13.366 0.373 0.500 -1.371 H7 58O 42 58O H8 H8 H 0 1 N N N -11.616 13.610 12.302 0.691 0.257 0.364 H8 58O 43 58O H9 H9 H 0 1 N N N -13.665 15.028 12.816 1.957 -1.318 -1.924 H9 58O 44 58O H10 H10 H 0 1 N N N -14.670 13.811 11.958 2.760 -0.057 -0.958 H10 58O 45 58O H11 H11 H 0 1 N N N -12.751 11.716 9.258 0.042 -1.941 1.449 H11 58O 46 58O H12 H12 H 0 1 N N N -11.422 12.776 9.841 -0.724 -3.208 0.460 H12 58O 47 58O H13 H13 H 0 1 N N N -13.034 14.191 8.694 1.689 -3.683 0.831 H13 58O 48 58O H14 H14 H 0 1 N N N -14.404 13.461 9.596 1.340 -3.409 -0.893 H14 58O 49 58O H16 H16 H 0 1 N N N -13.927 16.231 9.249 3.918 -3.163 0.557 H16 58O 50 58O H17 H17 H 0 1 N N N -15.192 15.596 10.356 3.814 -2.720 -1.164 H17 58O 51 58O H18 H18 H 0 1 N N N -16.099 17.196 11.769 4.945 -0.847 -1.988 H18 58O 52 58O H19 H19 H 0 1 N N N -17.099 19.201 13.405 6.808 1.316 -2.733 H19 58O 53 58O H20 H20 H 0 1 N N N -13.532 21.342 13.652 7.871 2.287 1.187 H20 58O 54 58O H21 H21 H 0 1 N N N -11.930 19.718 12.064 6.271 0.380 2.619 H21 58O 55 58O H22 H22 H 0 1 N N N -9.811 17.490 10.018 4.449 -1.772 4.489 H22 58O 56 58O H23 H23 H 0 1 N N N -10.578 19.088 10.308 6.032 -1.288 3.835 H23 58O 57 58O H24 H24 H 0 1 N N N -10.200 18.009 11.693 4.698 -0.112 3.898 H24 58O 58 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 58O CAN CAL SING N N 1 58O CAN NBH SING N N 2 58O CAL CBG SING N N 3 58O CAP NBH SING N N 4 58O CAP CAZ SING N N 5 58O OAV CAA SING N N 6 58O OAV CBA SING N N 7 58O NBH CAO SING N N 8 58O FAE CBI SING N N 9 58O CAZ CBA DOUB Y N 10 58O CAZ CAI SING Y N 11 58O CBA CAK SING Y N 12 58O CBG NAT SING N N 13 58O CBG CAM SING N N 14 58O N1 C2 DOUB Y N 15 58O N1 C6 SING Y N 16 58O NAT C6 SING N N 17 58O CAI CBC DOUB Y N 18 58O C2 N3 SING Y N 19 58O FAD CBI SING N N 20 58O C6 C5 DOUB Y N 21 58O CAK CBD DOUB Y N 22 58O CAO CAM SING N N 23 58O CBI FAC SING N N 24 58O CBI CAQ SING N N 25 58O N3 C4 DOUB Y N 26 58O C5 C4 SING Y N 27 58O C5 CAJ SING Y N 28 58O C4 SAW SING Y N 29 58O CBC CBD SING Y N 30 58O CBC CAH SING Y N 31 58O CAJ CAY DOUB Y N 32 58O CBD NAU SING Y N 33 58O CAY SAW SING Y N 34 58O CAY CAQ SING N N 35 58O CAH CAX DOUB Y N 36 58O NAU CAX SING Y N 37 58O CAX CAF SING N N 38 58O CAF NAB TRIP N N 39 58O CAQ H1 SING N N 40 58O CAQ H2 SING N N 41 58O CAJ H3 SING N N 42 58O C2 H4 SING N N 43 58O NAT H5 SING N N 44 58O CBG H6 SING N N 45 58O CAM H7 SING N N 46 58O CAM H8 SING N N 47 58O CAO H9 SING N N 48 58O CAO H10 SING N N 49 58O CAL H11 SING N N 50 58O CAL H12 SING N N 51 58O CAN H13 SING N N 52 58O CAN H14 SING N N 53 58O CAP H16 SING N N 54 58O CAP H17 SING N N 55 58O CAI H18 SING N N 56 58O CAH H19 SING N N 57 58O NAU H20 SING N N 58 58O CAK H21 SING N N 59 58O CAA H22 SING N N 60 58O CAA H23 SING N N 61 58O CAA H24 SING N N 62 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 58O SMILES ACDLabs 12.01 "c12sc(CC(F)(F)F)cc1c(ncn2)NC3CCN(CC3)Cc4c(cc5c(c4)cc(C#N)n5)OC" 58O InChI InChI 1.03 "InChI=1S/C24H23F3N6OS/c1-34-21-9-20-14(7-17(11-28)31-20)6-15(21)12-33-4-2-16(3-5-33)32-22-19-8-18(10-24(25,26)27)35-23(19)30-13-29-22/h6-9,13,16,31H,2-5,10,12H2,1H3,(H,29,30,32)" 58O InChIKey InChI 1.03 ZIAHUDJHXDVKDL-UHFFFAOYSA-N 58O SMILES_CANONICAL CACTVS 3.385 "COc1cc2[nH]c(cc2cc1CN3CCC(CC3)Nc4ncnc5sc(CC(F)(F)F)cc45)C#N" 58O SMILES CACTVS 3.385 "COc1cc2[nH]c(cc2cc1CN3CCC(CC3)Nc4ncnc5sc(CC(F)(F)F)cc45)C#N" 58O SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COc1cc2c(cc1CN3CCC(CC3)Nc4c5cc(sc5ncn4)CC(F)(F)F)cc([nH]2)C#N" 58O SMILES "OpenEye OEToolkits" 1.9.2 "COc1cc2c(cc1CN3CCC(CC3)Nc4c5cc(sc5ncn4)CC(F)(F)F)cc([nH]2)C#N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 58O "SYSTEMATIC NAME" ACDLabs 12.01 "6-methoxy-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1H-indole-2-carbonitrile" 58O "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "6-methoxy-5-[[4-[[6-[2,2,2-tris(fluoranyl)ethyl]thieno[2,3-d]pyrimidin-4-yl]amino]piperidin-1-yl]methyl]-1H-indole-2-carbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 58O "Create component" 2015-08-21 RCSB 58O "Modify synonyms" 2015-08-27 RCSB 58O "Initial release" 2016-03-30 RCSB 58O "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 58O _pdbx_chem_comp_synonyms.name MI-336 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##