data_5EX # _chem_comp.id 5EX _chem_comp.name "ethyl (2Z,4S)-4-[(N-{[(cyclobutylmethyl)amino](oxo)acetyl}-L-phenylalanyl)amino]-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H36 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-09-18 _chem_comp.pdbx_modified_date 2016-03-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 512.598 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5EX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5DP9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5EX C23 C1 C 0 1 N N N -4.019 -9.076 4.152 -7.408 -1.685 0.651 C23 5EX 1 5EX C22 C2 C 0 1 N N N -5.919 -6.964 1.895 -3.795 -0.819 0.796 C22 5EX 2 5EX C21 C3 C 0 1 N N N -4.138 -8.465 2.768 -6.010 -1.718 1.270 C21 5EX 3 5EX C20 C4 C 0 1 N N N -6.182 -7.462 0.507 -2.858 -0.018 -0.048 C20 5EX 4 5EX C24 C5 C 0 1 N N N -3.838 -10.592 4.180 -8.479 -2.381 1.509 C24 5EX 5 5EX C26 C6 C 0 1 N N N -3.383 -7.459 -3.032 5.021 -2.324 -2.811 C26 5EX 6 5EX C27 C7 C 0 1 N N N -5.178 -10.765 4.874 -9.055 -2.939 0.197 C27 5EX 7 5EX C18 C8 C 0 1 N N N -6.529 -3.181 -5.955 6.310 0.607 2.984 C18 5EX 8 5EX C10 C9 C 0 1 N N S -6.052 -7.929 -4.522 3.138 0.412 -0.870 C10 5EX 9 5EX C7 C10 C 0 1 Y N N -12.583 -7.083 1.050 -4.627 3.851 -1.031 C7 5EX 10 5EX C5 C11 C 0 1 Y N N -10.789 -7.996 -0.288 -3.112 2.807 0.501 C5 5EX 11 5EX C6 C12 C 0 1 Y N N -11.896 -8.179 0.541 -4.373 3.291 0.207 C6 5EX 12 5EX C2 C13 C 0 1 N N S -7.925 -7.290 -1.279 -0.643 0.882 -0.522 C2 5EX 13 5EX C3 C14 C 0 1 N N N -9.179 -6.448 -1.522 -0.730 2.356 -0.122 C3 5EX 14 5EX C4 C15 C 0 1 Y N N -10.365 -6.708 -0.614 -2.105 2.883 -0.443 C4 5EX 15 5EX C11 C16 C 0 1 N N N -4.870 -8.901 -4.548 3.285 -0.770 -1.831 C11 5EX 16 5EX C12 C17 C 0 1 N N S -4.030 -8.820 -3.269 4.629 -1.459 -1.590 C12 5EX 17 5EX C13 C18 C 0 1 N N N -2.869 -9.751 -3.333 4.519 -2.451 -0.453 C13 5EX 18 5EX C14 C19 C 0 1 N N N -6.978 -8.136 -5.747 4.146 1.474 -1.224 C14 5EX 19 5EX C15 C20 C 0 1 N N N -7.746 -6.832 -5.943 5.052 1.856 -0.327 C15 5EX 20 5EX C16 C21 C 0 1 N N N -6.961 -5.609 -6.356 5.320 1.018 0.850 C16 5EX 21 5EX C17 C22 C 0 1 N N N -7.044 -6.993 -2.453 0.765 0.387 -0.316 C17 5EX 22 5EX O1 O1 O 0 1 N N N -2.994 -10.897 -3.704 3.967 -2.237 0.605 O1 5EX 23 5EX C8 C23 C 0 1 Y N N -12.169 -5.797 0.723 -3.622 3.922 -1.977 C8 5EX 24 5EX O2 O2 O 0 1 N N N -7.338 -4.340 -5.771 6.088 1.489 1.853 O2 5EX 25 5EX C9 C24 C 0 1 Y N N -11.073 -5.612 -0.110 -2.361 3.438 -1.683 C9 5EX 26 5EX N1 N1 N 0 1 N N N -1.754 -9.143 -2.934 5.121 -3.606 -0.787 N1 5EX 27 5EX C19 C25 C 0 1 N N N -7.406 -1.951 -6.016 7.198 1.309 4.013 C19 5EX 28 5EX O3 O3 O 0 1 N N N -6.036 -5.620 -7.157 4.848 -0.100 0.920 O3 5EX 29 5EX N2 N2 N 0 1 N N N -7.341 -7.010 0.030 -1.562 0.096 0.305 N2 5EX 30 5EX C25 C26 C 0 1 N N N -1.963 -7.763 -2.560 5.699 -3.536 -2.134 C25 5EX 31 5EX N N3 N 0 1 N N N -6.856 -8.010 -3.310 1.786 0.965 -0.980 N 5EX 32 5EX O4 O4 O 0 1 N N N -6.550 -5.884 -2.560 0.980 -0.531 0.447 O4 5EX 33 5EX O21 O5 O 0 1 N N N -5.426 -8.176 -0.165 -3.263 0.530 -1.052 O21 5EX 34 5EX O5 O6 O 0 1 N N N -6.585 -6.012 2.261 -3.390 -1.367 1.800 O5 5EX 35 5EX N6 N4 N 0 1 N N N -5.070 -7.378 2.828 -5.091 -0.932 0.442 N6 5EX 36 5EX C28 C27 C 0 1 N N N -5.344 -9.253 4.877 -7.644 -2.787 -0.396 C28 5EX 37 5EX H1 H1 H 0 1 N N N -3.272 -8.559 4.772 -7.699 -0.691 0.311 H1 5EX 38 5EX H2 H2 H 0 1 N N N -4.498 -9.224 2.058 -6.047 -1.294 2.274 H2 5EX 39 5EX H3 H3 H 0 1 N N N -3.156 -8.094 2.441 -5.660 -2.749 1.324 H3 5EX 40 5EX H4 H4 H 0 1 N N N -3.790 -11.053 3.183 -8.077 -3.148 2.171 H4 5EX 41 5EX H5 H5 H 0 1 N N N -2.979 -10.927 4.780 -9.147 -1.687 2.019 H5 5EX 42 5EX H6 H6 H 0 1 N N N -3.362 -6.875 -3.964 4.137 -2.633 -3.369 H6 5EX 43 5EX H7 H7 H 0 1 N N N -3.934 -6.900 -2.261 5.722 -1.794 -3.456 H7 5EX 44 5EX H8 H8 H 0 1 N N N -5.931 -11.302 4.278 -9.388 -3.974 0.272 H8 5EX 45 5EX H9 H9 H 0 1 N N N -5.114 -11.215 5.876 -9.796 -2.288 -0.266 H9 5EX 46 5EX H10 H10 H 0 1 N N N -5.965 -3.275 -6.895 5.353 0.355 3.442 H10 5EX 47 5EX H11 H11 H 0 1 N N N -5.827 -3.088 -5.113 6.800 -0.305 2.643 H11 5EX 48 5EX H12 H12 H 0 1 N N N -5.641 -6.911 -4.595 3.310 0.073 0.151 H12 5EX 49 5EX H13 H13 H 0 1 N N N -13.435 -7.230 1.697 -5.612 4.229 -1.260 H13 5EX 50 5EX H14 H14 H 0 1 N N N -10.260 -8.853 -0.678 -2.913 2.370 1.469 H14 5EX 51 5EX H15 H15 H 0 1 N N N -12.221 -9.179 0.789 -5.160 3.231 0.945 H15 5EX 52 5EX H16 H16 H 0 1 N N N -8.214 -8.351 -1.321 -0.917 0.773 -1.572 H16 5EX 53 5EX H17 H17 H 0 1 N N N -8.897 -5.391 -1.407 -0.543 2.454 0.947 H17 5EX 54 5EX H18 H18 H 0 1 N N N -9.506 -6.629 -2.556 0.016 2.927 -0.675 H18 5EX 55 5EX H19 H19 H 0 1 N N N -5.255 -9.926 -4.655 2.476 -1.480 -1.660 H19 5EX 56 5EX H20 H20 H 0 1 N N N -4.230 -8.658 -5.409 3.240 -0.410 -2.859 H20 5EX 57 5EX H21 H21 H 0 1 N N N -4.662 -9.075 -2.406 5.404 -0.721 -1.381 H21 5EX 58 5EX H22 H22 H 0 1 N N N -7.063 -9.030 -6.346 4.134 1.926 -2.204 H22 5EX 59 5EX H24 H24 H 0 1 N N N -8.814 -6.785 -5.792 5.591 2.782 -0.464 H24 5EX 60 5EX H26 H26 H 0 1 N N N -12.699 -4.942 1.116 -3.821 4.356 -2.946 H26 5EX 61 5EX H27 H27 H 0 1 N N N -10.764 -4.611 -0.371 -1.574 3.497 -2.421 H27 5EX 62 5EX H28 H28 H 0 1 N N N -0.863 -9.595 -2.897 5.168 -4.385 -0.211 H28 5EX 63 5EX H29 H29 H 0 1 N N N -6.778 -1.059 -6.158 7.364 0.647 4.862 H29 5EX 64 5EX H30 H30 H 0 1 N N N -8.108 -2.043 -6.858 8.155 1.561 3.555 H30 5EX 65 5EX H31 H31 H 0 1 N N N -7.970 -1.856 -5.077 6.707 2.221 4.354 H31 5EX 66 5EX H32 H32 H 0 1 N N N -7.869 -6.414 0.635 -1.238 -0.342 1.108 H32 5EX 67 5EX H33 H33 H 0 1 N N N -1.236 -7.108 -3.063 5.478 -4.449 -2.687 H33 5EX 68 5EX H34 H34 H 0 1 N N N -1.878 -7.637 -1.471 6.776 -3.381 -2.075 H34 5EX 69 5EX H35 H35 H 0 1 N N N -7.298 -8.882 -3.102 1.626 1.748 -1.531 H35 5EX 70 5EX H36 H36 H 0 1 N N N -5.083 -6.864 3.685 -5.415 -0.494 -0.360 H36 5EX 71 5EX H37 H37 H 0 1 N N N -5.363 -8.810 5.884 -7.639 -2.422 -1.423 H37 5EX 72 5EX H38 H38 H 0 1 N N N -6.215 -8.900 4.305 -7.015 -3.666 -0.255 H38 5EX 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5EX O3 C16 DOUB N N 1 5EX C16 C15 SING N N 2 5EX C16 O2 SING N N 3 5EX C19 C18 SING N N 4 5EX C18 O2 SING N N 5 5EX C15 C14 DOUB N Z 6 5EX C14 C10 SING N N 7 5EX C11 C10 SING N N 8 5EX C11 C12 SING N N 9 5EX C10 N SING N N 10 5EX O1 C13 DOUB N N 11 5EX C13 C12 SING N N 12 5EX C13 N1 SING N N 13 5EX N C17 SING N N 14 5EX C12 C26 SING N N 15 5EX C26 C25 SING N N 16 5EX N1 C25 SING N N 17 5EX O4 C17 DOUB N N 18 5EX C17 C2 SING N N 19 5EX C3 C2 SING N N 20 5EX C3 C4 SING N N 21 5EX C2 N2 SING N N 22 5EX C4 C5 DOUB Y N 23 5EX C4 C9 SING Y N 24 5EX C5 C6 SING Y N 25 5EX O21 C20 DOUB N N 26 5EX C9 C8 DOUB Y N 27 5EX N2 C20 SING N N 28 5EX C20 C22 SING N N 29 5EX C6 C7 DOUB Y N 30 5EX C8 C7 SING Y N 31 5EX C22 O5 DOUB N N 32 5EX C22 N6 SING N N 33 5EX C21 N6 SING N N 34 5EX C21 C23 SING N N 35 5EX C23 C24 SING N N 36 5EX C23 C28 SING N N 37 5EX C24 C27 SING N N 38 5EX C27 C28 SING N N 39 5EX C23 H1 SING N N 40 5EX C21 H2 SING N N 41 5EX C21 H3 SING N N 42 5EX C24 H4 SING N N 43 5EX C24 H5 SING N N 44 5EX C26 H6 SING N N 45 5EX C26 H7 SING N N 46 5EX C27 H8 SING N N 47 5EX C27 H9 SING N N 48 5EX C18 H10 SING N N 49 5EX C18 H11 SING N N 50 5EX C10 H12 SING N N 51 5EX C7 H13 SING N N 52 5EX C5 H14 SING N N 53 5EX C6 H15 SING N N 54 5EX C2 H16 SING N N 55 5EX C3 H17 SING N N 56 5EX C3 H18 SING N N 57 5EX C11 H19 SING N N 58 5EX C11 H20 SING N N 59 5EX C12 H21 SING N N 60 5EX C14 H22 SING N N 61 5EX C15 H24 SING N N 62 5EX C8 H26 SING N N 63 5EX C9 H27 SING N N 64 5EX N1 H28 SING N N 65 5EX C19 H29 SING N N 66 5EX C19 H30 SING N N 67 5EX C19 H31 SING N N 68 5EX N2 H32 SING N N 69 5EX C25 H33 SING N N 70 5EX C25 H34 SING N N 71 5EX N H35 SING N N 72 5EX N6 H36 SING N N 73 5EX C28 H37 SING N N 74 5EX C28 H38 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5EX SMILES ACDLabs 12.01 "C1(CCC1)CNC(=O)C(NC(Cc2ccccc2)C(NC(CC3CCNC3=O)[C@H]=[C@H]C(OCC)=O)=O)=O" 5EX InChI InChI 1.03 "InChI=1S/C27H36N4O6/c1-2-37-23(32)12-11-21(16-20-13-14-28-24(20)33)30-25(34)22(15-18-7-4-3-5-8-18)31-27(36)26(35)29-17-19-9-6-10-19/h3-5,7-8,11-12,19-22H,2,6,9-10,13-17H2,1H3,(H,28,33)(H,29,35)(H,30,34)(H,31,36)/t20-,21+,22-/m0/s1" 5EX InChIKey InChI 1.03 JXIYUFBHNQDFQS-BDTNDASRSA-N 5EX SMILES_CANONICAL CACTVS 3.385 "CCOC(=O)\C=C/[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](Cc2ccccc2)NC(=O)C(=O)NCC3CCC3" 5EX SMILES CACTVS 3.385 "CCOC(=O)C=C[CH](C[CH]1CCNC1=O)NC(=O)[CH](Cc2ccccc2)NC(=O)C(=O)NCC3CCC3" 5EX SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCOC(=O)C=C[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](Cc2ccccc2)NC(=O)C(=O)NCC3CCC3" 5EX SMILES "OpenEye OEToolkits" 1.9.2 "CCOC(=O)C=CC(CC1CCNC1=O)NC(=O)C(Cc2ccccc2)NC(=O)C(=O)NCC3CCC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5EX "SYSTEMATIC NAME" ACDLabs 12.01 "ethyl (2Z,4S)-4-[(N-{[(cyclobutylmethyl)amino](oxo)acetyl}-L-phenylalanyl)amino]-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate" 5EX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "ethyl (4S)-4-[[(2S)-2-[[2-(cyclobutylmethylamino)-2-oxidanylidene-ethanoyl]amino]-3-phenyl-propanoyl]amino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pent-2-enoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5EX "Create component" 2015-09-18 RCSB 5EX "Initial release" 2016-03-30 RCSB #