data_5GN # _chem_comp.id 5GN _chem_comp.name "N-{5-[(7-bromonaphthalen-1-yl)methyl]-1,3-thiazol-2-yl}-2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]acetamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H19 Br N4 O S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-09-24 _chem_comp.pdbx_modified_date 2016-01-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 499.446 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5GN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5DY4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5GN C11 C1 C 0 1 Y N N -13.431 -26.990 12.434 -4.536 0.311 -0.236 C11 5GN 1 5GN C6 C2 C 0 1 Y N N -13.204 -26.821 16.161 -4.471 -3.334 0.288 C6 5GN 2 5GN C8 C3 C 0 1 Y N N -11.829 -28.610 15.386 -5.630 -2.335 2.133 C8 5GN 3 5GN C3 C4 C 0 1 Y N N -15.973 -25.851 14.291 -2.060 -1.752 -1.334 C3 5GN 4 5GN N2 N1 N 0 1 Y N N -21.493 -28.015 12.582 6.281 1.139 0.200 N2 5GN 5 5GN C10 C5 C 0 1 Y N N -13.099 -27.269 13.787 -4.735 -0.957 0.334 C10 5GN 6 5GN C4 C6 C 0 1 N N N -14.601 -25.374 14.669 -3.517 -2.028 -1.601 C4 5GN 7 5GN C1 C7 C 0 1 Y N N -18.203 -26.174 13.416 0.207 -0.884 -0.919 C1 5GN 8 5GN C7 C8 C 0 1 Y N N -12.332 -27.866 16.407 -5.155 -3.440 1.498 C7 5GN 9 5GN N3 N2 N 0 1 Y N N -22.218 -29.201 10.630 7.727 -0.647 0.468 N3 5GN 10 5GN C9 C9 C 0 1 Y N N -12.198 -28.340 14.050 -5.431 -1.065 1.564 C9 5GN 11 5GN N1 N3 N 0 1 Y N N -17.888 -27.157 14.209 0.097 -2.176 -0.938 N1 5GN 12 5GN C2 C10 C 0 1 Y N N -16.624 -26.959 14.698 -1.107 -2.670 -1.160 C2 5GN 13 5GN C5 C11 C 0 1 Y N N -13.606 -26.499 14.888 -4.259 -2.122 -0.293 C5 5GN 14 5GN BR BR1 BR 0 0 N N N -13.269 -27.266 9.628 -4.737 3.124 -0.367 BR 5GN 15 5GN C12 C12 C 0 1 Y N N -12.890 -27.737 11.431 -5.008 1.418 0.403 C12 5GN 16 5GN C13 C13 C 0 1 Y N N -12.029 -28.787 11.678 -5.687 1.312 1.616 C13 5GN 17 5GN C14 C14 C 0 1 Y N N -11.684 -29.085 12.963 -5.908 0.098 2.191 C14 5GN 18 5GN S S1 S 0 1 Y N N -16.983 -24.979 13.197 -1.316 -0.160 -1.204 S 5GN 19 5GN N N4 N 0 1 N N N -19.477 -26.084 12.905 1.391 -0.189 -0.701 N 5GN 20 5GN C C15 C 0 1 N N N -19.883 -25.132 12.017 2.539 -0.863 -0.489 C 5GN 21 5GN O O1 O 0 1 N N N -19.250 -24.107 11.777 2.539 -2.076 -0.488 O 5GN 22 5GN C15 C16 C 0 1 N N N -21.217 -25.423 11.364 3.822 -0.109 -0.253 C15 5GN 23 5GN S1 S2 S 0 1 N N N -21.421 -26.796 10.198 5.175 -1.286 -0.003 S1 5GN 24 5GN C16 C17 C 0 1 Y N N -21.698 -28.151 11.272 6.513 -0.166 0.243 C16 5GN 25 5GN C20 C18 C 0 1 Y N N -22.559 -30.244 11.405 8.753 0.166 0.656 C20 5GN 26 5GN C21 C19 C 0 1 N N N -23.158 -31.430 10.711 10.130 -0.389 0.911 C21 5GN 27 5GN C19 C20 C 0 1 Y N N -22.351 -30.218 12.772 8.545 1.536 0.617 C19 5GN 28 5GN C17 C21 C 0 1 Y N N -21.799 -29.084 13.331 7.263 2.006 0.381 C17 5GN 29 5GN C18 C22 C 0 1 N N N -21.431 -29.008 14.781 6.991 3.488 0.330 C18 5GN 30 5GN H1 H1 H 0 1 N N N -14.113 -26.185 12.200 -4.008 0.409 -1.173 H1 5GN 31 5GN H2 H2 H 0 1 N N N -13.579 -26.243 16.992 -4.104 -4.227 -0.196 H2 5GN 32 5GN H3 H3 H 0 1 N N N -11.141 -29.415 15.599 -6.159 -2.433 3.070 H3 5GN 33 5GN H4 H4 H 0 1 N N N -14.223 -24.727 13.863 -3.936 -1.219 -2.200 H4 5GN 34 5GN H5 H5 H 0 1 N N N -14.679 -24.793 15.600 -3.615 -2.969 -2.143 H5 5GN 35 5GN H6 H6 H 0 1 N N N -12.047 -28.094 17.423 -5.311 -4.415 1.937 H6 5GN 36 5GN H7 H7 H 0 1 N N N -16.168 -27.661 15.381 -1.305 -3.731 -1.196 H7 5GN 37 5GN H8 H8 H 0 1 N N N -11.631 -29.368 10.859 -6.050 2.205 2.102 H8 5GN 38 5GN H9 H9 H 0 1 N N N -11.007 -29.904 13.154 -6.436 0.031 3.131 H9 5GN 39 5GN H10 H10 H 0 1 N N N -20.149 -26.761 13.204 1.391 0.781 -0.702 H10 5GN 40 5GN H11 H11 H 0 1 N N N -21.503 -24.510 10.821 4.040 0.517 -1.118 H11 5GN 41 5GN H12 H12 H 0 1 N N N -21.931 -25.602 12.182 3.717 0.518 0.632 H12 5GN 42 5GN H13 H13 H 0 1 N N N -23.218 -31.232 9.631 10.649 -0.524 -0.038 H13 5GN 43 5GN H14 H14 H 0 1 N N N -22.528 -32.314 10.887 10.692 0.304 1.537 H14 5GN 44 5GN H15 H15 H 0 1 N N N -24.168 -31.615 11.107 10.046 -1.350 1.418 H15 5GN 45 5GN H16 H16 H 0 1 N N N -22.615 -31.065 13.387 9.365 2.223 0.768 H16 5GN 46 5GN H17 H17 H 0 1 N N N -20.950 -28.040 14.988 6.739 3.845 1.328 H17 5GN 47 5GN H18 H18 H 0 1 N N N -22.338 -29.105 15.395 7.879 4.008 -0.029 H18 5GN 48 5GN H19 H19 H 0 1 N N N -20.734 -29.823 15.025 6.158 3.681 -0.346 H19 5GN 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5GN BR C12 SING N N 1 5GN S1 C16 SING N N 2 5GN S1 C15 SING N N 3 5GN N3 C16 DOUB Y N 4 5GN N3 C20 SING Y N 5 5GN C21 C20 SING N N 6 5GN C16 N2 SING Y N 7 5GN C15 C SING N N 8 5GN C20 C19 DOUB Y N 9 5GN C12 C13 DOUB Y N 10 5GN C12 C11 SING Y N 11 5GN C13 C14 SING Y N 12 5GN O C DOUB N N 13 5GN C N SING N N 14 5GN C11 C10 DOUB Y N 15 5GN N2 C17 DOUB Y N 16 5GN C19 C17 SING Y N 17 5GN N C1 SING N N 18 5GN C14 C9 DOUB Y N 19 5GN S C1 SING Y N 20 5GN S C3 SING Y N 21 5GN C17 C18 SING N N 22 5GN C1 N1 DOUB Y N 23 5GN C10 C9 SING Y N 24 5GN C10 C5 SING Y N 25 5GN C9 C8 SING Y N 26 5GN N1 C2 SING Y N 27 5GN C3 C4 SING N N 28 5GN C3 C2 DOUB Y N 29 5GN C4 C5 SING N N 30 5GN C5 C6 DOUB Y N 31 5GN C8 C7 DOUB Y N 32 5GN C6 C7 SING Y N 33 5GN C11 H1 SING N N 34 5GN C6 H2 SING N N 35 5GN C8 H3 SING N N 36 5GN C4 H4 SING N N 37 5GN C4 H5 SING N N 38 5GN C7 H6 SING N N 39 5GN C2 H7 SING N N 40 5GN C13 H8 SING N N 41 5GN C14 H9 SING N N 42 5GN N H10 SING N N 43 5GN C15 H11 SING N N 44 5GN C15 H12 SING N N 45 5GN C21 H13 SING N N 46 5GN C21 H14 SING N N 47 5GN C21 H15 SING N N 48 5GN C19 H16 SING N N 49 5GN C18 H17 SING N N 50 5GN C18 H18 SING N N 51 5GN C18 H19 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5GN SMILES ACDLabs 12.01 "c4c1c(cccc1Cc2cnc(s2)NC(=O)CSc3nc(cc(n3)C)C)ccc4Br" 5GN InChI InChI 1.03 "InChI=1S/C22H19BrN4OS2/c1-13-8-14(2)26-22(25-13)29-12-20(28)27-21-24-11-18(30-21)9-16-5-3-4-15-6-7-17(23)10-19(15)16/h3-8,10-11H,9,12H2,1-2H3,(H,24,27,28)" 5GN InChIKey InChI 1.03 YKVBPTQPNLFGIG-UHFFFAOYSA-N 5GN SMILES_CANONICAL CACTVS 3.385 "Cc1cc(C)nc(SCC(=O)Nc2sc(Cc3cccc4ccc(Br)cc34)cn2)n1" 5GN SMILES CACTVS 3.385 "Cc1cc(C)nc(SCC(=O)Nc2sc(Cc3cccc4ccc(Br)cc34)cn2)n1" 5GN SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cc1cc(nc(n1)SCC(=O)Nc2ncc(s2)Cc3cccc4c3cc(cc4)Br)C" 5GN SMILES "OpenEye OEToolkits" 1.9.2 "Cc1cc(nc(n1)SCC(=O)Nc2ncc(s2)Cc3cccc4c3cc(cc4)Br)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5GN "SYSTEMATIC NAME" ACDLabs 12.01 "N-{5-[(7-bromonaphthalen-1-yl)methyl]-1,3-thiazol-2-yl}-2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]acetamide" 5GN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "N-[5-[(7-bromanylnaphthalen-1-yl)methyl]-1,3-thiazol-2-yl]-2-(4,6-dimethylpyrimidin-2-yl)sulfanyl-ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5GN "Create component" 2015-09-24 EBI 5GN "Initial release" 2016-01-13 RCSB #