data_5JL
# 
_chem_comp.id                                    5JL 
_chem_comp.name                                  2,8-dithioxo-1,2,3,7,8,9-hexahydro-6H-purin-6-one 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H4 N4 O S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-10-02 
_chem_comp.pdbx_modified_date                    2016-05-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        200.241 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5JL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5E3D 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5JL C4 C1 C 0 1 N N N 7.230 -10.341 4.640 -0.180 0.656  0.001  C4 5JL 1  
5JL C5 C2 C 0 1 N N N 7.187 -10.746 3.358 -0.360 -0.700 0.001  C5 5JL 2  
5JL C6 C3 C 0 1 N N N 7.874 -11.840 2.963 0.768  -1.546 -0.000 C6 5JL 3  
5JL C8 C4 C 0 1 N N N 5.977 -8.973  3.587 -2.355 0.266  0.000  C8 5JL 4  
5JL N1 N1 N 0 1 N N N 8.637 -12.572 3.873 2.002  -0.999 -0.000 N1 5JL 5  
5JL N3 N2 N 0 1 N N N 7.980 -11.040 5.591 1.098  1.165  -0.003 N3 5JL 6  
5JL O6 O1 O 0 1 N N N 7.864 -12.253 1.803 0.631  -2.756 -0.000 O6 5JL 7  
5JL N7 N3 N 0 1 N N N 6.394 -9.882  2.701 -1.739 -0.933 -0.000 N7 5JL 8  
5JL S8 S1 S 0 1 N N N 4.905 -7.592  3.270 -4.049 0.515  0.000  S8 5JL 9  
5JL N9 N4 N 0 1 N N N 6.485 -9.245  4.781 -1.421 1.237  0.001  N9 5JL 10 
5JL C2 C5 C 0 1 N N N 8.694 -12.171 5.205 2.159  0.337  0.000  C2 5JL 11 
5JL S2 S2 S 0 1 N N N 9.630 -13.056 6.351 3.739  0.996  0.001  S2 5JL 12 
5JL H1 H1 H 0 1 N N N 9.141 -13.381 3.570 2.783  -1.575 -0.000 H1 5JL 13 
5JL H2 H2 H 0 1 N N N 8.003 -10.730 6.541 1.235  2.126  -0.008 H2 5JL 14 
5JL H3 H3 H 0 1 N N N 6.160 -9.914  1.729 -2.173 -1.801 -0.001 H3 5JL 15 
5JL H4 H4 H 0 1 N N N 6.338 -8.728  5.624 -1.599 2.191  -0.003 H4 5JL 16 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5JL O6 C6 DOUB N N 1  
5JL N7 C5 SING N N 2  
5JL N7 C8 SING N N 3  
5JL C6 C5 SING N N 4  
5JL C6 N1 SING N N 5  
5JL S8 C8 DOUB N N 6  
5JL C5 C4 DOUB N N 7  
5JL C8 N9 SING N N 8  
5JL N1 C2 SING N N 9  
5JL C4 N9 SING N N 10 
5JL C4 N3 SING N N 11 
5JL C2 N3 SING N N 12 
5JL C2 S2 DOUB N N 13 
5JL N1 H1 SING N N 14 
5JL N3 H2 SING N N 15 
5JL N7 H3 SING N N 16 
5JL N9 H4 SING N N 17 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5JL SMILES           ACDLabs              12.01 "C2=1NC(NC=1C(NC(N2)=S)=O)=S"                                               
5JL InChI            InChI                1.03  "InChI=1S/C5H4N4OS2/c10-3-1-2(7-4(11)6-1)8-5(12)9-3/h(H4,6,7,8,9,10,11,12)" 
5JL InChIKey         InChI                1.03  NDSUZZIWNBVBKW-UHFFFAOYSA-N                                                 
5JL SMILES_CANONICAL CACTVS               3.385 "O=C1NC(=S)NC2=C1NC(=S)N2"                                                  
5JL SMILES           CACTVS               3.385 "O=C1NC(=S)NC2=C1NC(=S)N2"                                                  
5JL SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C12=C(NC(=S)N1)NC(=S)NC2=O"                                                
5JL SMILES           "OpenEye OEToolkits" 1.9.2 "C12=C(NC(=S)N1)NC(=S)NC2=O"                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5JL "SYSTEMATIC NAME" ACDLabs              12.01 2,8-dithioxo-1,2,3,7,8,9-hexahydro-6H-purin-6-one   
5JL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2,8-bis(sulfanylidene)-7,9-dihydro-3H-purin-6-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5JL "Create component" 2015-10-02 EBI  
5JL "Initial release"  2016-05-25 RCSB 
#