data_5JV # _chem_comp.id 5JV _chem_comp.name "4-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]pent-4-enoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H17 N2 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-10-05 _chem_comp.pdbx_modified_date 2016-10-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 344.257 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5JV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5E3K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5JV OA O1 O 0 1 N N N 33.997 2.214 53.605 -2.319 4.071 -0.651 OA 5JV 1 5JV CA C1 C 0 1 N N N 33.183 1.850 54.491 -2.508 3.629 0.457 CA 5JV 2 5JV OB O2 O 0 1 N N N 33.448 1.337 55.604 -2.286 4.401 1.533 OB 5JV 3 5JV CB C2 C 0 1 N N N 31.763 2.089 54.138 -2.997 2.215 0.632 CB 5JV 4 5JV CG C3 C 0 1 N N N 30.776 1.299 54.989 -3.174 1.563 -0.741 CG 5JV 5 5JV CD C4 C 0 1 N N N 29.351 1.419 54.549 -3.663 0.148 -0.566 CD 5JV 6 5JV CE C5 C 0 1 N N N 29.086 1.787 53.309 -4.966 -0.117 -0.625 CE 5JV 7 5JV N2 N1 N 0 1 N N N 28.178 1.130 55.462 -2.774 -0.856 -0.348 N2 5JV 8 5JV C4A C6 C 0 1 N N N 28.178 1.320 56.708 -1.497 -0.596 -0.290 C4A 5JV 9 5JV C4 C7 C 0 1 Y N N 26.976 0.977 57.529 -0.535 -1.684 -0.054 C4 5JV 10 5JV C3 C8 C 0 1 Y N N 25.796 0.457 56.962 -0.968 -3.012 0.106 C3 5JV 11 5JV O3 O3 O 0 1 N N N 25.656 0.235 55.622 -2.289 -3.320 0.046 O3 5JV 12 5JV C2 C9 C 0 1 Y N N 24.713 0.157 57.777 -0.022 -4.002 0.326 C2 5JV 13 5JV C2A C10 C 0 1 N N N 23.439 -0.379 57.146 -0.468 -5.431 0.500 C2A 5JV 14 5JV N1 N2 N 0 1 Y N N 24.795 0.347 59.123 1.261 -3.709 0.385 N1 5JV 15 5JV C6 C11 C 0 1 Y N N 25.886 0.819 59.691 1.708 -2.476 0.240 C6 5JV 16 5JV C5 C12 C 0 1 Y N N 27.023 1.127 58.919 0.842 -1.428 0.013 C5 5JV 17 5JV C5A C13 C 0 1 N N N 28.245 1.654 59.665 1.368 -0.025 -0.157 C5A 5JV 18 5JV O4P O4 O 0 1 N N N 28.366 3.057 59.506 2.793 -0.034 -0.048 O4P 5JV 19 5JV P P1 P 0 1 N N N 29.782 3.792 59.730 3.691 1.296 -0.179 P 5JV 20 5JV O3P O5 O 0 1 N N N 30.630 3.448 58.523 3.390 1.969 -1.462 O3P 5JV 21 5JV O1P O6 O 0 1 N N N 29.348 5.235 59.801 3.357 2.291 1.042 O1P 5JV 22 5JV O2P O7 O 0 1 N N N 30.326 3.307 61.033 5.250 0.897 -0.135 O2P 5JV 23 5JV H1 H1 H 0 1 N N N 34.390 1.254 55.699 -1.977 5.302 1.371 H1 5JV 24 5JV H2 H2 H 0 1 N N N 31.550 3.161 54.265 -2.270 1.648 1.213 H2 5JV 25 5JV H3 H3 H 0 1 N N N 31.615 1.808 53.085 -3.953 2.223 1.156 H3 5JV 26 5JV H4 H4 H 0 1 N N N 31.060 0.237 54.950 -3.901 2.130 -1.321 H4 5JV 27 5JV H5 H5 H 0 1 N N N 30.848 1.660 56.025 -2.218 1.555 -1.265 H5 5JV 28 5JV H6 H6 H 0 1 N N N 28.061 1.873 52.978 -5.317 -1.131 -0.500 H6 5JV 29 5JV H7 H7 H 0 1 N N N 29.894 2.002 52.625 -5.673 0.681 -0.799 H7 5JV 30 5JV H8 H8 H 0 1 N N N 29.053 1.734 57.187 -1.146 0.417 -0.415 H8 5JV 31 5JV H9 H9 H 0 1 N N N 24.791 -0.116 55.447 -2.602 -3.536 -0.843 H9 5JV 32 5JV H10 H10 H 0 1 N N N 22.688 -0.557 57.930 -0.495 -5.924 -0.472 H10 5JV 33 5JV H11 H11 H 0 1 N N N 23.050 0.355 56.426 0.232 -5.953 1.153 H11 5JV 34 5JV H12 H12 H 0 1 N N N 23.657 -1.323 56.626 -1.463 -5.450 0.945 H12 5JV 35 5JV H13 H13 H 0 1 N N N 25.909 0.971 60.760 2.770 -2.286 0.296 H13 5JV 36 5JV H14 H14 H 0 1 N N N 28.143 1.420 60.735 1.082 0.354 -1.138 H14 5JV 37 5JV H15 H15 H 0 1 N N N 29.148 1.167 59.268 0.948 0.617 0.617 H15 5JV 38 5JV H16 H16 H 0 1 N N N 29.690 5.706 59.051 3.530 1.914 1.915 H16 5JV 39 5JV H17 H17 H 0 1 N N N 31.143 2.846 60.884 5.851 1.651 -0.209 H17 5JV 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5JV CE CD DOUB N N 1 5JV OA CA DOUB N N 2 5JV CB CA SING N N 3 5JV CB CG SING N N 4 5JV CA OB SING N N 5 5JV CD CG SING N N 6 5JV CD N2 SING N N 7 5JV N2 C4A DOUB N N 8 5JV O3 C3 SING N N 9 5JV C4A C4 SING N N 10 5JV C3 C4 DOUB Y N 11 5JV C3 C2 SING Y N 12 5JV C2A C2 SING N N 13 5JV C4 C5 SING Y N 14 5JV C2 N1 DOUB Y N 15 5JV O3P P DOUB N N 16 5JV C5 C5A SING N N 17 5JV C5 C6 DOUB Y N 18 5JV N1 C6 SING Y N 19 5JV O4P C5A SING N N 20 5JV O4P P SING N N 21 5JV P O1P SING N N 22 5JV P O2P SING N N 23 5JV OB H1 SING N N 24 5JV CB H2 SING N N 25 5JV CB H3 SING N N 26 5JV CG H4 SING N N 27 5JV CG H5 SING N N 28 5JV CE H6 SING N N 29 5JV CE H7 SING N N 30 5JV C4A H8 SING N N 31 5JV O3 H9 SING N N 32 5JV C2A H10 SING N N 33 5JV C2A H11 SING N N 34 5JV C2A H12 SING N N 35 5JV C6 H13 SING N N 36 5JV C5A H14 SING N N 37 5JV C5A H15 SING N N 38 5JV O1P H16 SING N N 39 5JV O2P H17 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5JV SMILES ACDLabs 12.01 "O=C(O)CC/C(N=C\c1c(cnc(c1O)C)COP(O)(O)=O)=C" 5JV InChI InChI 1.03 "InChI=1S/C13H17N2O7P/c1-8(3-4-12(16)17)14-6-11-10(7-22-23(19,20)21)5-15-9(2)13(11)18/h5-6,18H,1,3-4,7H2,2H3,(H,16,17)(H2,19,20,21)/b14-6+" 5JV InChIKey InChI 1.03 HRCALJQKZAULQS-MKMNVTDBSA-N 5JV SMILES_CANONICAL CACTVS 3.385 "Cc1ncc(CO[P](O)(O)=O)c(C=NC(=C)CCC(O)=O)c1O" 5JV SMILES CACTVS 3.385 "Cc1ncc(CO[P](O)(O)=O)c(C=NC(=C)CCC(O)=O)c1O" 5JV SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/C(=C)CCC(=O)O)O" 5JV SMILES "OpenEye OEToolkits" 1.9.2 "Cc1c(c(c(cn1)COP(=O)(O)O)C=NC(=C)CCC(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5JV "SYSTEMATIC NAME" ACDLabs 12.01 "4-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]pent-4-enoic acid" 5JV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "4-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]pent-4-enoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5JV "Create component" 2015-10-05 RCSB 5JV "Initial release" 2016-10-19 RCSB #