data_5MM # _chem_comp.id 5MM _chem_comp.name 2-O-methyl-1,6-di-O-phosphono-D-mannitol _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C7 H18 O12 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-09-19 _chem_comp.pdbx_modified_date 2011-10-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 356.158 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5MM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3TU9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5MM C01 C01 C 0 1 N N N 6.366 -30.243 52.529 2.412 -2.664 0.256 C01 5MM 1 5MM O02 O02 O 0 1 N N N 5.289 -31.055 52.117 1.785 -1.520 0.840 O02 5MM 2 5MM C03 C03 C 0 1 N N R 4.053 -30.463 51.742 1.765 -0.372 -0.011 C03 5MM 3 5MM C04 C04 C 0 1 N N N 2.891 -31.217 52.448 3.027 0.459 0.224 C04 5MM 4 5MM O05 O05 O 0 1 N N N 1.633 -30.764 51.992 4.174 -0.292 -0.183 O05 5MM 5 5MM P06 P06 P 0 1 N N N 0.275 -30.877 52.946 5.676 0.276 -0.077 P06 5MM 6 5MM O07 O07 O 0 1 N N N -0.780 -30.003 52.421 5.946 0.702 1.315 O07 5MM 7 5MM O08 O08 O 0 1 N N N -0.213 -32.454 52.956 6.717 -0.878 -0.496 O08 5MM 8 5MM O09 O09 O 0 1 N N N 0.627 -30.386 54.469 5.845 1.536 -1.065 O09 5MM 9 5MM C10 C10 C 0 1 N N S 3.918 -30.486 50.186 0.530 0.475 0.306 C10 5MM 10 5MM O11 O11 O 0 1 N N N 2.662 -29.974 49.801 0.510 1.623 -0.544 O11 5MM 11 5MM C12 C12 C 0 1 N N R 5.055 -29.657 49.509 -0.733 -0.356 0.072 C12 5MM 12 5MM O13 O13 O 0 1 N N N 4.998 -28.308 49.876 -0.723 -0.872 -1.260 O13 5MM 13 5MM C14 C14 C 0 1 N N R 5.003 -29.733 47.957 -1.967 0.526 0.268 C14 5MM 14 5MM O15 O15 O 0 1 N N N 3.912 -30.509 47.540 -1.977 1.042 1.601 O15 5MM 15 5MM C16 C16 C 0 1 N N N 6.319 -30.396 47.482 -3.230 -0.305 0.034 C16 5MM 16 5MM O17 O17 O 0 1 N N N 6.648 -31.442 48.368 -4.378 0.544 0.102 O17 5MM 17 5MM P18 P18 P 0 1 N N N 7.423 -32.767 47.742 -5.881 0.003 -0.098 P18 5MM 18 5MM O19 O19 O 0 1 N N N 7.658 -33.780 48.776 -6.923 1.200 0.174 O19 5MM 19 5MM O20 O20 O 0 1 N N N 8.870 -32.237 47.165 -6.062 -0.534 -1.605 O20 5MM 20 5MM O21 O21 O 0 1 N N N 6.511 -33.382 46.500 -6.139 -1.101 0.854 O21 5MM 21 5MM H01 H01 H 0 1 N N N 7.230 -30.877 52.777 2.387 -3.493 0.964 H01 5MM 22 5MM H01A H01A H 0 0 N N N 6.638 -29.555 51.715 1.879 -2.946 -0.652 H01A 5MM 23 5MM H01B H01B H 0 0 N N N 6.070 -29.664 53.416 3.447 -2.427 0.011 H01B 5MM 24 5MM H03 H03 H 0 1 N N N 4.012 -29.411 52.061 1.728 -0.692 -1.052 H03 5MM 25 5MM H04 H04 H 0 1 N N N 2.982 -32.292 52.232 2.970 1.379 -0.358 H04 5MM 26 5MM H04A H04A H 0 0 N N N 2.960 -31.042 53.532 3.110 0.704 1.283 H04A 5MM 27 5MM HO08 HO08 H 0 0 N N N -1.098 -32.514 52.617 7.644 -0.605 -0.456 HO08 5MM 28 5MM HO09 HO09 H 0 0 N N N 0.081 -29.643 54.697 5.682 1.331 -1.996 HO09 5MM 29 5MM H10 H10 H 0 1 N N N 4.006 -31.531 49.853 0.567 0.795 1.348 H10 5MM 30 5MM HO11 HO11 H 0 0 N N N 2.589 -29.992 48.854 0.477 1.414 -1.487 HO11 5MM 31 5MM H12 H12 H 0 1 N N N 5.994 -30.107 49.863 -0.760 -1.183 0.782 H12 5MM 32 5MM HO13 HO13 H 0 0 N N N 5.701 -27.833 49.448 -0.698 -0.190 -1.946 HO13 5MM 33 5MM H14 H14 H 0 1 N N N 4.889 -28.725 47.531 -1.939 1.353 -0.441 H14 5MM 34 5MM HO15 HO15 H 0 0 N N N 3.894 -30.546 46.591 -2.001 0.361 2.286 HO15 5MM 35 5MM H16 H16 H 0 1 N N N 6.186 -30.799 46.467 -3.181 -0.771 -0.950 H16 5MM 36 5MM H16A H16A H 0 0 N N N 7.127 -29.650 47.473 -3.304 -1.078 0.799 H16A 5MM 37 5MM HO19 HO19 H 0 0 N N N 7.237 -34.593 48.525 -7.850 0.946 0.071 HO19 5MM 38 5MM HO20 HO20 H 0 0 N N N 8.910 -32.384 46.227 -5.908 0.138 -2.283 HO20 5MM 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5MM O02 C01 SING N N 1 5MM C01 H01 SING N N 2 5MM C01 H01A SING N N 3 5MM C01 H01B SING N N 4 5MM C03 O02 SING N N 5 5MM C10 C03 SING N N 6 5MM C03 C04 SING N N 7 5MM C03 H03 SING N N 8 5MM O05 C04 SING N N 9 5MM C04 H04 SING N N 10 5MM C04 H04A SING N N 11 5MM O05 P06 SING N N 12 5MM O07 P06 DOUB N N 13 5MM P06 O08 SING N N 14 5MM P06 O09 SING N N 15 5MM O08 HO08 SING N N 16 5MM O09 HO09 SING N N 17 5MM C12 C10 SING N N 18 5MM O11 C10 SING N N 19 5MM C10 H10 SING N N 20 5MM O11 HO11 SING N N 21 5MM C14 C12 SING N N 22 5MM C12 O13 SING N N 23 5MM C12 H12 SING N N 24 5MM O13 HO13 SING N N 25 5MM C16 C14 SING N N 26 5MM O15 C14 SING N N 27 5MM C14 H14 SING N N 28 5MM O15 HO15 SING N N 29 5MM C16 O17 SING N N 30 5MM C16 H16 SING N N 31 5MM C16 H16A SING N N 32 5MM P18 O17 SING N N 33 5MM O21 P18 DOUB N N 34 5MM O20 P18 SING N N 35 5MM P18 O19 SING N N 36 5MM O19 HO19 SING N N 37 5MM O20 HO20 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5MM SMILES ACDLabs 12.01 "O=P(OCC(OC)C(O)C(O)C(O)COP(=O)(O)O)(O)O" 5MM InChI InChI 1.03 "InChI=1S/C7H18O12P2/c1-17-5(3-19-21(14,15)16)7(10)6(9)4(8)2-18-20(11,12)13/h4-10H,2-3H2,1H3,(H2,11,12,13)(H2,14,15,16)/t4-,5-,6-,7-/m1/s1" 5MM InChIKey InChI 1.03 QXWUAOXRWVSNDB-DBRKOABJSA-N 5MM SMILES_CANONICAL CACTVS 3.370 "CO[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O" 5MM SMILES CACTVS 3.370 "CO[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O" 5MM SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CO[C@H](COP(=O)(O)O)[C@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O" 5MM SMILES "OpenEye OEToolkits" 1.7.2 "COC(COP(=O)(O)O)C(C(C(COP(=O)(O)O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5MM "SYSTEMATIC NAME" ACDLabs 12.01 2-O-methyl-1,6-di-O-phosphono-D-mannitol 5MM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "[(2R,3S,4R,5R)-2-methoxy-3,4,5-tris(oxidanyl)-6-phosphonooxy-hexyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5MM "Create component" 2011-09-19 RCSB #