data_5MN # _chem_comp.id 5MN _chem_comp.name "~{N}-[5-(1~{H}-indol-5-yl)-2-(4-methylpiperazin-1-yl)phenyl]-3-methyl-benzamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H28 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-10-22 _chem_comp.pdbx_modified_date 2015-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 424.537 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5MN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5EAM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5MN C4 C1 C 0 1 N N N 0.940 -8.932 -38.749 3.560 3.721 1.135 C4 5MN 1 5MN C5 C2 C 0 1 Y N N 0.596 -9.749 -35.078 0.603 1.799 0.013 C5 5MN 2 5MN C6 C3 C 0 1 Y N N -0.446 -10.372 -34.364 0.433 0.417 0.120 C6 5MN 3 5MN N1 N1 N 0 1 N N N 0.331 -9.224 -36.400 1.890 2.345 -0.011 N1 5MN 4 5MN C7 C4 C 0 1 N N N -2.938 -10.127 -34.469 1.461 -1.709 -0.181 C7 5MN 5 5MN C8 C5 C 0 1 Y N N -4.104 -10.816 -35.112 2.602 -2.626 0.026 C8 5MN 6 5MN N2 N2 N 0 1 N N N -1.715 -10.354 -34.995 1.551 -0.422 0.209 N2 5MN 7 5MN C9 C6 C 0 1 Y N N -5.274 -10.064 -35.272 3.774 -2.162 0.627 C9 5MN 8 5MN C10 C7 C 0 1 Y N N -6.388 -10.625 -35.870 4.834 -3.023 0.817 C10 5MN 9 5MN C11 C8 C 0 1 Y N N -6.354 -11.945 -36.294 4.739 -4.344 0.415 C11 5MN 10 5MN C12 C9 C 0 1 Y N N -5.210 -12.724 -36.135 3.580 -4.809 -0.181 C12 5MN 11 5MN N3 N3 N 0 1 Y N N 1.981 -11.825 -27.006 -7.221 -1.220 0.096 N3 5MN 12 5MN C13 C10 C 0 1 N N N -5.200 -14.176 -36.545 3.484 -6.249 -0.615 C13 5MN 13 5MN C14 C11 C 0 1 Y N N -4.086 -12.139 -35.550 2.509 -3.960 -0.372 C14 5MN 14 5MN C15 C12 C 0 1 Y N N -0.231 -10.709 -33.025 -0.841 -0.122 0.138 C15 5MN 15 5MN O O1 O 0 1 N N N -3.110 -9.292 -33.594 0.442 -2.115 -0.704 O 5MN 16 5MN C16 C13 C 0 1 Y N N 0.998 -10.480 -32.394 -1.951 0.716 0.049 C16 5MN 17 5MN C17 C14 C 0 1 Y N N 2.014 -9.883 -33.135 -1.776 2.094 -0.058 C17 5MN 18 5MN C18 C15 C 0 1 Y N N 1.825 -9.526 -34.457 -0.504 2.630 -0.075 C18 5MN 19 5MN C2 C16 C 0 1 N N N -0.650 -8.140 -36.540 2.128 3.080 -1.261 C2 5MN 20 5MN C1 C17 C 0 1 N N N -1.154 -8.077 -37.978 3.569 3.593 -1.283 C1 5MN 21 5MN C3 C18 C 0 1 N N N 1.449 -9.001 -37.318 2.118 3.208 1.156 C3 5MN 22 5MN N N4 N 0 1 N N N -0.046 -7.862 -38.904 3.797 4.457 -0.115 N 5MN 23 5MN C C19 C 0 1 N N N -0.525 -7.798 -40.277 5.149 5.030 -0.140 C 5MN 24 5MN C19 C20 C 0 1 Y N N 1.219 -10.893 -30.975 -3.319 0.141 0.067 C19 5MN 25 5MN C26 C21 C 0 1 Y N N 0.352 -11.799 -30.345 -3.493 -1.242 0.173 C26 5MN 26 5MN C25 C22 C 0 1 Y N N 0.536 -12.192 -29.027 -4.745 -1.788 0.191 C25 5MN 27 5MN C22 C23 C 0 1 Y N N 1.602 -11.657 -28.316 -5.867 -0.969 0.103 C22 5MN 28 5MN C23 C24 C 0 1 Y N N 3.096 -11.062 -26.763 -7.912 -0.045 -0.012 C23 5MN 29 5MN C24 C25 C 0 1 Y N N 3.451 -10.394 -27.890 -7.055 0.987 -0.070 C24 5MN 30 5MN C21 C26 C 0 1 Y N N 2.503 -10.753 -28.907 -5.704 0.425 -0.004 C21 5MN 31 5MN C20 C27 C 0 1 Y N N 2.300 -10.385 -30.243 -4.424 0.977 -0.022 C20 5MN 32 5MN H1 H1 H 0 1 N N N 0.473 -9.893 -39.011 3.723 4.385 1.984 H1 5MN 33 5MN H2 H2 H 0 1 N N N 1.788 -8.740 -39.423 4.247 2.877 1.196 H2 5MN 34 5MN H3 H3 H 0 1 N N N -1.703 -10.537 -35.978 2.391 -0.077 0.553 H3 5MN 35 5MN H4 H4 H 0 1 N N N -5.307 -9.041 -34.927 3.850 -1.132 0.941 H4 5MN 36 5MN H5 H5 H 0 1 N N N -7.283 -10.036 -36.007 5.742 -2.666 1.282 H5 5MN 37 5MN H6 H6 H 0 1 N N N -7.230 -12.377 -36.756 5.574 -5.012 0.562 H6 5MN 38 5MN H7 H7 H 0 1 N N N 1.519 -12.409 -26.338 -7.625 -2.101 0.154 H7 5MN 39 5MN H8 H8 H 0 1 N N N -4.865 -14.260 -37.589 3.089 -6.851 0.203 H8 5MN 40 5MN H9 H9 H 0 1 N N N -4.513 -14.736 -35.893 2.820 -6.325 -1.476 H9 5MN 41 5MN H10 H10 H 0 1 N N N -6.215 -14.590 -36.451 4.475 -6.613 -0.888 H10 5MN 42 5MN H11 H11 H 0 1 N N N -3.185 -12.723 -35.434 1.605 -4.325 -0.836 H11 5MN 43 5MN H12 H12 H 0 1 N N N -1.035 -11.159 -32.461 -0.975 -1.191 0.220 H12 5MN 44 5MN H13 H13 H 0 1 N N N 2.969 -9.695 -32.668 -2.636 2.744 -0.127 H13 5MN 45 5MN H14 H14 H 0 1 N N N 2.633 -9.072 -35.012 -0.371 3.699 -0.158 H14 5MN 46 5MN H15 H15 H 0 1 N N N -0.176 -7.183 -36.278 1.965 2.416 -2.110 H15 5MN 47 5MN H16 H16 H 0 1 N N N -1.498 -8.326 -35.864 1.440 3.924 -1.322 H16 5MN 48 5MN H17 H17 H 0 1 N N N -1.871 -7.248 -38.074 4.256 2.747 -1.249 H17 5MN 49 5MN H18 H18 H 0 1 N N N -1.654 -9.024 -38.227 3.739 4.163 -2.196 H18 5MN 50 5MN H19 H19 H 0 1 N N N 2.167 -9.829 -37.226 1.949 2.638 2.069 H19 5MN 51 5MN H20 H20 H 0 1 N N N 1.947 -8.054 -37.062 1.431 4.054 1.122 H20 5MN 52 5MN H22 H22 H 0 1 N N N -1.264 -6.988 -40.371 5.885 4.229 -0.061 H22 5MN 53 5MN H23 H23 H 0 1 N N N 0.321 -7.602 -40.952 5.298 5.569 -1.076 H23 5MN 54 5MN H24 H24 H 0 1 N N N -0.994 -8.756 -40.546 5.268 5.717 0.697 H24 5MN 55 5MN H25 H25 H 0 1 N N N -0.482 -12.202 -30.901 -2.629 -1.886 0.242 H25 5MN 56 5MN H26 H26 H 0 1 N N N -0.136 -12.899 -28.564 -4.864 -2.858 0.273 H26 5MN 57 5MN H27 H27 H 0 1 N N N 3.613 -11.002 -25.817 -8.988 0.041 -0.045 H27 5MN 58 5MN H28 H28 H 0 1 N N N 4.288 -9.720 -28.001 -7.313 2.032 -0.157 H28 5MN 59 5MN H29 H29 H 0 1 N N N 2.987 -9.699 -30.716 -4.293 2.046 -0.103 H29 5MN 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5MN C N SING N N 1 5MN N C4 SING N N 2 5MN N C1 SING N N 3 5MN C4 C3 SING N N 4 5MN C1 C2 SING N N 5 5MN C3 N1 SING N N 6 5MN C13 C12 SING N N 7 5MN C2 N1 SING N N 8 5MN N1 C5 SING N N 9 5MN C11 C12 DOUB Y N 10 5MN C11 C10 SING Y N 11 5MN C12 C14 SING Y N 12 5MN C10 C9 DOUB Y N 13 5MN C14 C8 DOUB Y N 14 5MN C9 C8 SING Y N 15 5MN C8 C7 SING N N 16 5MN C5 C18 DOUB Y N 17 5MN C5 C6 SING Y N 18 5MN N2 C7 SING N N 19 5MN N2 C6 SING N N 20 5MN C7 O DOUB N N 21 5MN C18 C17 SING Y N 22 5MN C6 C15 DOUB Y N 23 5MN C17 C16 DOUB Y N 24 5MN C15 C16 SING Y N 25 5MN C16 C19 SING N N 26 5MN C19 C26 DOUB Y N 27 5MN C19 C20 SING Y N 28 5MN C26 C25 SING Y N 29 5MN C20 C21 DOUB Y N 30 5MN C25 C22 DOUB Y N 31 5MN C21 C22 SING Y N 32 5MN C21 C24 SING Y N 33 5MN C22 N3 SING Y N 34 5MN C24 C23 DOUB Y N 35 5MN N3 C23 SING Y N 36 5MN C4 H1 SING N N 37 5MN C4 H2 SING N N 38 5MN N2 H3 SING N N 39 5MN C9 H4 SING N N 40 5MN C10 H5 SING N N 41 5MN C11 H6 SING N N 42 5MN N3 H7 SING N N 43 5MN C13 H8 SING N N 44 5MN C13 H9 SING N N 45 5MN C13 H10 SING N N 46 5MN C14 H11 SING N N 47 5MN C15 H12 SING N N 48 5MN C17 H13 SING N N 49 5MN C18 H14 SING N N 50 5MN C2 H15 SING N N 51 5MN C2 H16 SING N N 52 5MN C1 H17 SING N N 53 5MN C1 H18 SING N N 54 5MN C3 H19 SING N N 55 5MN C3 H20 SING N N 56 5MN C H22 SING N N 57 5MN C H23 SING N N 58 5MN C H24 SING N N 59 5MN C26 H25 SING N N 60 5MN C25 H26 SING N N 61 5MN C23 H27 SING N N 62 5MN C24 H28 SING N N 63 5MN C20 H29 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5MN InChI InChI 1.03 "InChI=1S/C27H28N4O/c1-19-4-3-5-23(16-19)27(32)29-25-18-21(20-6-8-24-22(17-20)10-11-28-24)7-9-26(25)31-14-12-30(2)13-15-31/h3-11,16-18,28H,12-15H2,1-2H3,(H,29,32)" 5MN InChIKey InChI 1.03 JXGJIPHOKSHSAC-UHFFFAOYSA-N 5MN SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)c2ccc(cc2NC(=O)c3cccc(C)c3)c4ccc5[nH]ccc5c4" 5MN SMILES CACTVS 3.385 "CN1CCN(CC1)c2ccc(cc2NC(=O)c3cccc(C)c3)c4ccc5[nH]ccc5c4" 5MN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "Cc1cccc(c1)C(=O)Nc2cc(ccc2N3CCN(CC3)C)c4ccc5c(c4)cc[nH]5" 5MN SMILES "OpenEye OEToolkits" 2.0.4 "Cc1cccc(c1)C(=O)Nc2cc(ccc2N3CCN(CC3)C)c4ccc5c(c4)cc[nH]5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 5MN "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{N}-[5-(1~{H}-indol-5-yl)-2-(4-methylpiperazin-1-yl)phenyl]-3-methyl-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5MN "Create component" 2015-10-22 RCSB 5MN "Initial release" 2015-11-04 RCSB #