data_5NG # _chem_comp.id 5NG _chem_comp.name "[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{R})-4-[[3-[2-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyldisulfanyl]ethylamino]-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C42 H70 N14 O32 P6 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms CoA-disulfide _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-10-27 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1533.052 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 5NG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5EGL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 5NG C17 C2 C 0 1 N N R 48.077 -51.240 -21.597 -13.052 5.502 1.531 C17 5NG 1 5NG C20 C3 C 0 1 N N S 48.572 -50.718 -19.193 -14.449 5.681 -0.457 C20 5NG 2 5NG C01 C4 C 0 1 N N N 40.770 -48.572 -13.472 -12.128 -4.698 1.294 C01 5NG 3 5NG C02 C5 C 0 1 N N N 40.698 -48.870 -14.981 -13.275 -5.018 0.334 C02 5NG 4 5NG C03 C6 C 0 1 N N N 40.455 -47.563 -15.737 -14.589 -4.491 0.915 C03 5NG 5 5NG C04 C7 C 0 1 N N N 42.079 -49.497 -15.413 -13.011 -4.350 -1.017 C04 5NG 6 5NG O05 O1 O 0 1 N N N 41.972 -50.013 -16.748 -12.920 -2.935 -0.839 O05 5NG 7 5NG P06 P1 P 0 1 N N N 43.406 -50.240 -17.580 -12.647 -1.914 -2.053 P06 5NG 8 5NG O07 O2 O 0 1 N N N 43.139 -50.445 -19.048 -13.662 -2.122 -3.110 O07 5NG 9 5NG O08 O3 O 0 1 N N N 44.124 -51.418 -17.030 -11.179 -2.181 -2.659 O08 5NG 10 5NG O09 O4 O 0 1 N N N 44.343 -48.881 -17.342 -12.737 -0.400 -1.513 O09 5NG 11 5NG P10 P2 P 0 1 N N N 44.754 -47.787 -18.545 -12.970 1.027 -2.219 P10 5NG 12 5NG O11 O5 O 0 1 N N N 45.366 -46.553 -17.864 -14.077 0.920 -3.196 O11 5NG 13 5NG O12 O6 O 0 1 N N N 43.526 -47.352 -19.310 -11.624 1.476 -2.980 O12 5NG 14 5NG O13 O7 O 0 1 N N N 45.842 -48.520 -19.549 -13.345 2.124 -1.102 O13 5NG 15 5NG C14 C8 C 0 1 N N N 47.074 -48.937 -19.023 -13.713 3.467 -1.422 C14 5NG 16 5NG O16 O8 O 0 1 N N N 47.375 -50.215 -21.212 -12.797 4.390 0.646 O16 5NG 17 5NG C18 C9 C 0 1 N N R 49.234 -51.304 -20.494 -13.808 6.532 0.662 C18 5NG 18 5NG O19 O9 O 0 1 N N N 49.601 -52.550 -20.301 -14.817 7.190 1.430 O19 5NG 19 5NG O21 O10 O 0 1 N N N 48.419 -51.790 -18.187 -15.873 5.788 -0.415 O21 5NG 20 5NG P22 P3 P 0 1 N N N 49.125 -51.634 -16.683 -16.750 6.323 -1.655 P22 5NG 21 5NG O23 O11 O 0 1 N N N 50.630 -51.430 -16.830 -16.442 5.520 -2.859 O23 5NG 22 5NG O24 O12 O 0 1 N N N 48.529 -50.459 -15.977 -18.315 6.186 -1.304 O24 5NG 23 5NG O25 O13 O 0 1 N N N 48.870 -52.890 -15.884 -16.396 7.868 -1.935 O25 5NG 24 5NG N26 N1 N 0 1 Y N N 48.536 -50.984 -22.995 -11.791 6.069 2.013 N26 5NG 25 5NG C27 C10 C 0 1 Y N N 48.150 -51.664 -24.082 -10.577 5.974 1.401 C27 5NG 26 5NG N28 N2 N 0 1 Y N N 48.736 -51.152 -25.152 -9.674 6.594 2.104 N28 5NG 27 5NG C29 C11 C 0 1 Y N N 49.512 -50.108 -24.760 -10.250 7.125 3.210 C29 5NG 28 5NG C30 C12 C 0 1 Y N N 50.355 -49.182 -25.412 -9.786 7.879 4.300 C30 5NG 29 5NG N31 N3 N 0 1 N N N 50.545 -49.226 -26.829 -8.452 8.235 4.399 N31 5NG 30 5NG N32 N4 N 0 1 Y N N 50.975 -48.275 -24.720 -10.657 8.243 5.235 N32 5NG 31 5NG C33 C13 C 0 1 Y N N 50.820 -48.217 -23.389 -11.932 7.909 5.150 C33 5NG 32 5NG N34 N5 N 0 1 Y N N 50.045 -49.049 -22.738 -12.411 7.204 4.147 N34 5NG 33 5NG C35 C14 C 0 1 Y N N 49.377 -50.001 -23.392 -11.616 6.800 3.162 C35 5NG 34 5NG C36 C15 C 0 1 N N R 39.562 -49.867 -15.310 -13.373 -6.533 0.143 C36 5NG 35 5NG O37 O14 O 0 1 N N N 39.914 -51.155 -14.888 -14.537 -6.842 -0.626 O37 5NG 36 5NG C38 C16 C 0 1 N N N 38.306 -49.458 -14.570 -12.147 -7.029 -0.580 C38 5NG 37 5NG O39 O15 O 0 1 N N N 37.751 -48.429 -14.831 -12.238 -7.438 -1.717 O39 5NG 38 5NG N40 N6 N 0 1 N N N 37.794 -50.399 -13.494 -10.949 -7.017 0.039 N40 5NG 39 5NG C41 C17 C 0 1 N N N 36.595 -50.076 -12.694 -9.742 -7.407 -0.694 C41 5NG 40 5NG C42 C18 C 0 1 N N N 35.341 -49.811 -13.477 -8.528 -7.306 0.232 C42 5NG 41 5NG C43 C19 C 0 1 N N N 34.211 -49.131 -12.651 -7.287 -7.707 -0.523 C43 5NG 42 5NG O44 O16 O 0 1 N N N 34.068 -47.956 -12.704 -7.365 -8.040 -1.686 O44 5NG 43 5NG N45 N7 N 0 1 N N N 33.353 -49.884 -11.801 -6.089 -7.695 0.096 N45 5NG 44 5NG C46 C20 C 0 1 N N N 33.499 -51.338 -11.704 -4.883 -8.085 -0.637 C46 5NG 45 5NG C47 C21 C 0 1 N N N 33.106 -51.828 -10.272 -3.669 -7.984 0.288 C47 5NG 46 5NG S48 S1 S 0 1 N N N 32.700 -50.403 -9.186 -2.174 -8.467 -0.620 S48 5NG 47 5NG S49 S2 S 0 1 N N N 31.520 -51.349 -7.694 -1.915 -6.918 -1.938 S49 5NG 48 5NG C50 C22 C 0 1 N N N 31.964 -53.155 -7.751 -0.997 -5.698 -0.958 C50 5NG 49 5NG C51 C23 C 0 1 N N N 31.617 -53.819 -6.434 0.424 -6.209 -0.709 C51 5NG 50 5NG N52 N8 N 0 1 N N N 30.153 -53.785 -6.261 1.165 -5.223 0.082 N52 5NG 51 5NG C53 C24 C 0 1 N N N 29.538 -53.578 -4.892 2.447 -5.461 0.424 C53 5NG 52 5NG O54 O17 O 0 1 N N N 30.257 -53.433 -3.962 2.987 -6.490 0.077 O54 5NG 53 5NG C55 C25 C 0 1 N N N 27.944 -53.540 -4.790 3.210 -4.447 1.237 C55 5NG 54 5NG C56 C26 C 0 1 N N N 27.263 -54.153 -3.539 4.630 -4.958 1.486 C56 5NG 55 5NG N57 N9 N 0 1 N N N 27.012 -53.066 -2.572 5.372 -3.973 2.277 N57 5NG 56 5NG C58 C27 C 0 1 N N N 25.698 -52.582 -2.104 6.654 -4.210 2.619 C58 5NG 57 5NG O59 O18 O 0 1 N N N 25.713 -51.672 -1.304 7.222 -5.193 2.195 O59 5NG 58 5NG C60 C28 C 0 1 N N R 24.298 -53.122 -2.519 7.380 -3.253 3.529 C60 5NG 59 5NG O61 O19 O 0 1 N N N 24.298 -54.503 -2.696 6.463 -2.274 4.021 O61 5NG 60 5NG C62 C29 C 0 1 N N N 23.760 -52.414 -3.780 8.499 -2.559 2.751 C62 5NG 61 5NG C63 C30 C 0 1 N N N 24.569 -51.138 -4.173 9.530 -3.597 2.304 C63 5NG 62 5NG C64 C31 C 0 1 N N N 23.764 -53.390 -4.979 7.910 -1.863 1.522 C64 5NG 63 5NG C65 C32 C 0 1 N N N 22.254 -51.908 -3.461 9.177 -1.521 3.648 C65 5NG 64 5NG O66 O20 O 0 1 N N N 21.573 -52.920 -2.862 10.222 -0.872 2.920 O66 5NG 65 5NG P67 P4 P 0 1 N N N 20.615 -52.577 -1.608 11.148 0.280 3.557 P67 5NG 66 5NG O68 O21 O 0 1 N N N 21.227 -51.488 -0.727 11.774 -0.220 4.801 O68 5NG 67 5NG O69 O22 O 0 1 N N N 20.427 -53.859 -0.816 10.245 1.571 3.892 O69 5NG 68 5NG O70 O23 O 0 1 N N N 19.130 -52.029 -2.215 12.296 0.688 2.504 O70 5NG 69 5NG P71 P5 P 0 1 N N N 18.236 -52.919 -3.340 13.722 1.424 2.634 P71 5NG 70 5NG O72 O24 O 0 1 N N N 16.861 -52.224 -3.553 14.463 0.865 3.787 O72 5NG 71 5NG O73 O25 O 0 1 N N N 18.052 -54.347 -2.825 13.494 3.002 2.858 O73 5NG 72 5NG O74 O26 O 0 1 N N N 19.061 -52.982 -4.826 14.572 1.191 1.286 O74 5NG 73 5NG C75 C33 C 0 1 N N N 18.577 -52.203 -5.920 15.922 1.631 1.131 C75 5NG 74 5NG C76 C34 C 0 1 N N R 18.605 -52.944 -7.085 16.426 1.251 -0.262 C76 5NG 75 5NG O77 O27 O 0 1 N N N 19.820 -53.954 -7.150 15.704 1.990 -1.262 O77 5NG 76 5NG C78 C35 C 0 1 N N R 19.320 -54.852 -7.881 16.628 2.256 -2.339 C78 5NG 77 5NG C79 C36 C 0 1 N N R 17.841 -55.043 -7.129 17.950 2.598 -1.605 C79 5NG 78 5NG O80 O28 O 0 1 N N N 17.027 -56.004 -7.826 19.079 2.336 -2.440 O80 5NG 79 5NG C81 C37 C 0 1 N N S 17.351 -53.869 -7.213 17.914 1.625 -0.402 C81 5NG 80 5NG O82 O29 O 0 1 N N N 16.685 -53.660 -8.599 18.699 0.462 -0.676 O82 5NG 81 5NG P83 P6 P 0 1 N N N 15.558 -52.425 -8.814 19.888 -0.040 0.287 P83 5NG 82 5NG O84 O30 O 0 1 N N N 15.312 -52.192 -10.335 20.856 1.061 0.490 O84 5NG 83 5NG O85 O31 O 0 1 N N N 14.235 -52.819 -8.157 19.276 -0.485 1.708 O85 5NG 84 5NG O86 O32 O 0 1 N N N 16.062 -51.159 -8.191 20.635 -1.294 -0.393 O86 5NG 85 5NG N87 N10 N 0 1 Y N N 20.117 -56.082 -7.958 16.172 3.394 -3.140 N87 5NG 86 5NG C88 C38 C 0 1 Y N N 20.059 -56.953 -8.972 15.340 4.391 -2.725 C88 5NG 87 5NG N89 N11 N 0 1 Y N N 20.905 -57.960 -8.772 15.145 5.239 -3.692 N89 5NG 88 5NG C90 C39 C 0 1 Y N N 21.528 -57.734 -7.593 15.838 4.842 -4.787 C90 5NG 89 5NG C91 C40 C 0 1 Y N N 22.503 -58.424 -6.861 16.005 5.346 -6.087 C91 5NG 90 5NG N92 N12 N 0 1 N N N 23.052 -59.701 -7.372 15.373 6.513 -6.481 N92 5NG 91 5NG N93 N13 N 0 1 Y N N 22.922 -57.929 -5.712 16.784 4.677 -6.931 N93 5NG 92 5NG C94 C41 C 0 1 Y N N 22.430 -56.770 -5.243 17.391 3.563 -6.564 C94 5NG 93 5NG N95 N14 N 0 1 Y N N 21.505 -56.094 -5.902 17.264 3.054 -5.357 N95 5NG 94 5NG C96 C42 C 0 1 Y N N 21.035 -56.543 -7.073 16.510 3.657 -4.444 C96 5NG 95 5NG H151 H1 H 0 0 N N N 46.617 -50.965 -19.204 -14.770 3.727 0.451 H151 5NG 96 5NG H171 H3 H 0 0 N N N 47.511 -52.182 -21.559 -13.673 5.185 2.369 H171 5NG 97 5NG H201 H4 H 0 0 N N N 49.385 -50.104 -18.777 -14.073 5.988 -1.433 H201 5NG 98 5NG H011 H5 H 0 0 N N N 40.945 -49.508 -12.921 -12.277 -5.236 2.230 H011 5NG 99 5NG H012 H6 H 0 0 N N N 41.595 -47.871 -13.276 -11.183 -5.004 0.846 H012 5NG 100 5NG H013 H7 H 0 0 N N N 39.822 -48.123 -13.141 -12.107 -3.626 1.491 H013 5NG 101 5NG H031 H8 H 0 0 N N N 40.402 -47.768 -16.817 -14.546 -3.405 0.983 H031 5NG 102 5NG H032 H9 H 0 0 N N N 39.507 -47.116 -15.402 -15.415 -4.782 0.267 H032 5NG 103 5NG H033 H10 H 0 0 N N N 41.281 -46.864 -15.536 -14.741 -4.912 1.909 H033 5NG 104 5NG H041 H11 H 0 0 N N N 42.860 -48.723 -15.380 -12.075 -4.725 -1.431 H041 5NG 105 5NG H042 H12 H 0 0 N N N 42.343 -50.313 -14.724 -13.828 -4.578 -1.701 H042 5NG 106 5NG H2 H13 H 0 1 N N N 44.264 -52.055 -17.721 -10.462 -2.063 -2.021 H2 5NG 107 5NG H3 H14 H 0 1 N N N 43.401 -46.416 -19.204 -10.856 1.566 -2.400 H3 5NG 108 5NG H141 H15 H 0 0 N N N 48.031 -48.674 -19.498 -12.895 3.950 -1.957 H141 5NG 109 5NG H142 H16 H 0 0 N N N 47.185 -49.885 -18.476 -14.604 3.460 -2.050 H142 5NG 110 5NG H181 H18 H 0 0 N N N 50.062 -50.650 -20.806 -13.114 7.258 0.240 H181 5NG 111 5NG H191 H19 H 0 0 N N N 50.288 -52.580 -19.645 -14.475 7.691 2.184 H191 5NG 112 5NG H5 H20 H 0 1 N N N 49.213 -49.834 -15.769 -18.904 6.491 -2.007 H5 5NG 113 5NG H6 H21 H 0 1 N N N 49.699 -53.286 -15.643 -16.573 8.454 -1.187 H6 5NG 114 5NG H271 H22 H 0 0 N N N 47.467 -52.500 -24.085 -10.392 5.460 0.470 H271 5NG 115 5NG H311 H23 H 0 0 N N N 51.174 -48.499 -27.104 -7.825 7.963 3.710 H311 5NG 116 5NG H312 H24 H 0 0 N N N 50.928 -50.113 -27.086 -8.143 8.755 5.157 H312 5NG 117 5NG H331 H25 H 0 0 N N N 51.352 -47.458 -22.835 -12.606 8.226 5.932 H331 5NG 118 5NG H361 H26 H 0 0 N N N 39.371 -49.845 -16.393 -13.442 -7.018 1.117 H361 5NG 119 5NG H371 H27 H 0 0 N N N 39.211 -51.760 -15.094 -14.543 -6.443 -1.507 H371 5NG 120 5NG H401 H28 H 0 0 N N N 38.279 -51.256 -13.323 -10.887 -6.751 0.970 H401 5NG 121 5NG H411 H29 H 0 0 N N N 36.400 -50.923 -12.020 -9.847 -8.433 -1.047 H411 5NG 122 5NG H412 H30 H 0 0 N N N 36.818 -49.178 -12.099 -9.605 -6.742 -1.547 H412 5NG 123 5NG H421 H31 H 0 0 N N N 35.594 -49.155 -14.323 -8.424 -6.280 0.584 H421 5NG 124 5NG H422 H32 H 0 0 N N N 34.962 -50.771 -13.858 -8.666 -7.971 1.084 H422 5NG 125 5NG H451 H33 H 0 0 N N N 32.647 -49.418 -11.267 -6.027 -7.429 1.026 H451 5NG 126 5NG H461 H34 H 0 0 N N N 32.843 -51.819 -12.445 -4.987 -9.111 -0.990 H461 5NG 127 5NG H462 H35 H 0 0 N N N 34.545 -51.612 -11.907 -4.745 -7.420 -1.490 H462 5NG 128 5NG H471 H36 H 0 0 N N N 32.229 -52.488 -10.344 -3.564 -6.958 0.641 H471 5NG 129 5NG H472 H37 H 0 0 N N N 33.949 -52.385 -9.837 -3.806 -8.649 1.141 H472 5NG 130 5NG H501 H38 H 0 0 N N N 31.403 -53.642 -8.563 -0.954 -4.754 -1.501 H501 5NG 131 5NG H502 H39 H 0 0 N N N 33.043 -53.259 -7.937 -1.500 -5.545 -0.004 H502 5NG 132 5NG H511 H40 H 0 0 N N N 31.965 -54.862 -6.442 0.381 -7.153 -0.166 H511 5NG 133 5NG H512 H41 H 0 0 N N N 32.100 -53.278 -5.607 0.927 -6.361 -1.664 H512 5NG 134 5NG H521 H42 H 0 0 N N N 29.559 -53.900 -7.057 0.734 -4.400 0.359 H521 5NG 135 5NG H551 H43 H 0 0 N N N 27.642 -52.483 -4.838 3.253 -3.503 0.694 H551 5NG 136 5NG H552 H44 H 0 0 N N N 27.551 -54.074 -5.667 2.706 -4.294 2.192 H552 5NG 137 5NG H561 H45 H 0 0 N N N 26.311 -54.623 -3.826 4.588 -5.902 2.029 H561 5NG 138 5NG H562 H46 H 0 0 N N N 27.924 -54.908 -3.088 5.134 -5.111 0.532 H562 5NG 139 5NG H571 H47 H 0 0 N N N 27.817 -52.609 -2.194 4.940 -3.149 2.555 H571 5NG 140 5NG H601 H48 H 0 0 N N N 23.610 -52.873 -1.698 7.808 -3.803 4.368 H601 5NG 141 5NG H611 H49 H 0 0 N N N 23.428 -54.790 -2.948 6.043 -1.746 3.328 H611 5NG 142 5NG H631 H50 H 0 0 N N N 24.130 -50.689 -5.076 9.084 -4.253 1.556 H631 5NG 143 5NG H632 H51 H 0 0 N N N 24.532 -50.412 -3.347 10.394 -3.090 1.874 H632 5NG 144 5NG H633 H52 H 0 0 N N N 25.615 -51.414 -4.372 9.846 -4.188 3.163 H633 5NG 145 5NG H641 H53 H 0 0 N N N 23.379 -52.876 -5.872 7.175 -1.124 1.840 H641 5NG 146 5NG H642 H54 H 0 0 N N N 24.792 -53.734 -5.168 8.707 -1.369 0.967 H642 5NG 147 5NG H643 H55 H 0 0 N N N 23.124 -54.255 -4.750 7.427 -2.603 0.883 H643 5NG 148 5NG H651 H56 H 0 0 N N N 22.290 -51.038 -2.789 8.442 -0.781 3.966 H651 5NG 149 5NG H652 H57 H 0 0 N N N 21.751 -51.627 -4.398 9.597 -2.016 4.523 H652 5NG 150 5NG H7 H58 H 0 1 N N N 20.729 -53.728 0.075 9.803 1.952 3.122 H7 5NG 151 5NG H8 H59 H 0 1 N N N 17.125 -54.534 -2.734 13.013 3.436 2.140 H8 5NG 152 5NG H751 H60 H 0 0 N N N 17.543 -51.890 -5.713 15.967 2.714 1.251 H751 5NG 153 5NG H752 H61 H 0 0 N N N 19.212 -51.313 -6.041 16.548 1.156 1.887 H752 5NG 154 5NG H761 H62 H 0 0 N N N 18.650 -52.291 -7.969 16.294 0.181 -0.425 H761 5NG 155 5NG H781 H63 H 0 0 N N N 19.112 -54.494 -8.900 16.754 1.371 -2.964 H781 5NG 156 5NG H791 H64 H 0 0 N N N 18.029 -55.368 -6.095 17.950 3.635 -1.268 H791 5NG 157 5NG H801 H65 H 0 0 N N N 16.193 -56.095 -7.381 19.097 2.859 -3.253 H801 5NG 158 5NG H811 H66 H 0 0 N N N 16.632 -53.624 -6.417 18.269 2.122 0.501 H811 5NG 159 5NG H9 H67 H 0 1 N N N 13.548 -52.838 -8.813 18.632 -1.204 1.651 H9 5NG 160 5NG H10 H68 H 0 1 N N N 16.125 -50.482 -8.855 21.365 -1.649 0.133 H10 5NG 161 5NG H881 H69 H 0 0 N N N 19.415 -56.853 -9.833 14.906 4.465 -1.739 H881 5NG 162 5NG H921 H70 H 0 0 N N N 23.728 -60.056 -6.726 14.807 6.993 -5.856 H921 5NG 163 5NG H922 H71 H 0 0 N N N 22.311 -60.364 -7.477 15.496 6.851 -7.382 H922 5NG 164 5NG H941 H72 H 0 0 N N N 22.799 -56.382 -4.305 18.015 3.051 -7.282 H941 5NG 165 5NG C15 C1 C 0 1 N N R ? ? ? -14.004 4.238 -0.133 C15 5NG 166 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5NG C15 C20 SING N N 1 5NG C15 C14 SING N N 2 5NG C17 O16 SING N N 3 5NG C17 C18 SING N N 4 5NG C17 N26 SING N N 5 5NG C20 C18 SING N N 6 5NG C20 O21 SING N N 7 5NG C01 C02 SING N N 8 5NG C02 C03 SING N N 9 5NG C02 C04 SING N N 10 5NG C02 C36 SING N N 11 5NG C04 O05 SING N N 12 5NG O05 P06 SING N N 13 5NG P06 O07 DOUB N N 14 5NG P06 O08 SING N N 15 5NG P06 O09 SING N N 16 5NG O09 P10 SING N N 17 5NG P10 O11 DOUB N N 18 5NG P10 O12 SING N N 19 5NG P10 O13 SING N N 20 5NG O13 C14 SING N N 21 5NG C18 O19 SING N N 22 5NG O21 P22 SING N N 23 5NG P22 O23 DOUB N N 24 5NG P22 O24 SING N N 25 5NG P22 O25 SING N N 26 5NG N26 C27 SING Y N 27 5NG N26 C35 SING Y N 28 5NG C27 N28 DOUB Y N 29 5NG N28 C29 SING Y N 30 5NG C29 C30 DOUB Y N 31 5NG C29 C35 SING Y N 32 5NG C30 N31 SING N N 33 5NG C30 N32 SING Y N 34 5NG N32 C33 DOUB Y N 35 5NG C33 N34 SING Y N 36 5NG N34 C35 DOUB Y N 37 5NG C36 O37 SING N N 38 5NG C36 C38 SING N N 39 5NG C38 O39 DOUB N N 40 5NG C38 N40 SING N N 41 5NG N40 C41 SING N N 42 5NG C41 C42 SING N N 43 5NG C42 C43 SING N N 44 5NG C43 O44 DOUB N N 45 5NG C43 N45 SING N N 46 5NG N45 C46 SING N N 47 5NG C46 C47 SING N N 48 5NG C47 S48 SING N N 49 5NG S48 S49 SING N N 50 5NG S49 C50 SING N N 51 5NG C50 C51 SING N N 52 5NG C51 N52 SING N N 53 5NG N52 C53 SING N N 54 5NG C53 O54 DOUB N N 55 5NG C53 C55 SING N N 56 5NG C55 C56 SING N N 57 5NG C56 N57 SING N N 58 5NG N57 C58 SING N N 59 5NG C58 O59 DOUB N N 60 5NG C58 C60 SING N N 61 5NG C60 O61 SING N N 62 5NG C60 C62 SING N N 63 5NG C62 C63 SING N N 64 5NG C62 C64 SING N N 65 5NG C62 C65 SING N N 66 5NG C65 O66 SING N N 67 5NG O66 P67 SING N N 68 5NG P67 O68 DOUB N N 69 5NG P67 O69 SING N N 70 5NG P67 O70 SING N N 71 5NG O70 P71 SING N N 72 5NG P71 O72 DOUB N N 73 5NG P71 O73 SING N N 74 5NG P71 O74 SING N N 75 5NG O74 C75 SING N N 76 5NG C75 C76 SING N N 77 5NG C76 O77 SING N N 78 5NG C76 C81 SING N N 79 5NG O77 C78 SING N N 80 5NG C78 C79 SING N N 81 5NG C78 N87 SING N N 82 5NG C79 O80 SING N N 83 5NG C79 C81 SING N N 84 5NG C81 O82 SING N N 85 5NG O82 P83 SING N N 86 5NG P83 O84 DOUB N N 87 5NG P83 O85 SING N N 88 5NG P83 O86 SING N N 89 5NG N87 C88 SING Y N 90 5NG N87 C96 SING Y N 91 5NG C88 N89 DOUB Y N 92 5NG N89 C90 SING Y N 93 5NG C90 C91 DOUB Y N 94 5NG C90 C96 SING Y N 95 5NG C91 N92 SING N N 96 5NG C91 N93 SING Y N 97 5NG N93 C94 DOUB Y N 98 5NG C94 N95 SING Y N 99 5NG N95 C96 DOUB Y N 100 5NG C15 H151 SING N N 101 5NG C17 H171 SING N N 102 5NG C20 H201 SING N N 103 5NG C01 H011 SING N N 104 5NG C01 H012 SING N N 105 5NG C01 H013 SING N N 106 5NG C03 H031 SING N N 107 5NG C03 H032 SING N N 108 5NG C03 H033 SING N N 109 5NG C04 H041 SING N N 110 5NG C04 H042 SING N N 111 5NG O08 H2 SING N N 112 5NG O12 H3 SING N N 113 5NG C14 H141 SING N N 114 5NG C14 H142 SING N N 115 5NG C18 H181 SING N N 116 5NG O19 H191 SING N N 117 5NG O24 H5 SING N N 118 5NG O25 H6 SING N N 119 5NG C27 H271 SING N N 120 5NG N31 H311 SING N N 121 5NG N31 H312 SING N N 122 5NG C33 H331 SING N N 123 5NG C36 H361 SING N N 124 5NG O37 H371 SING N N 125 5NG N40 H401 SING N N 126 5NG C41 H411 SING N N 127 5NG C41 H412 SING N N 128 5NG C42 H421 SING N N 129 5NG C42 H422 SING N N 130 5NG N45 H451 SING N N 131 5NG C46 H461 SING N N 132 5NG C46 H462 SING N N 133 5NG C47 H471 SING N N 134 5NG C47 H472 SING N N 135 5NG C50 H501 SING N N 136 5NG C50 H502 SING N N 137 5NG C51 H511 SING N N 138 5NG C51 H512 SING N N 139 5NG N52 H521 SING N N 140 5NG C55 H551 SING N N 141 5NG C55 H552 SING N N 142 5NG C56 H561 SING N N 143 5NG C56 H562 SING N N 144 5NG N57 H571 SING N N 145 5NG C60 H601 SING N N 146 5NG O61 H611 SING N N 147 5NG C63 H631 SING N N 148 5NG C63 H632 SING N N 149 5NG C63 H633 SING N N 150 5NG C64 H641 SING N N 151 5NG C64 H642 SING N N 152 5NG C64 H643 SING N N 153 5NG C65 H651 SING N N 154 5NG C65 H652 SING N N 155 5NG O69 H7 SING N N 156 5NG O73 H8 SING N N 157 5NG C75 H751 SING N N 158 5NG C75 H752 SING N N 159 5NG C76 H761 SING N N 160 5NG C78 H781 SING N N 161 5NG C79 H791 SING N N 162 5NG O80 H801 SING N N 163 5NG C81 H811 SING N N 164 5NG O85 H9 SING N N 165 5NG O86 H10 SING N N 166 5NG C88 H881 SING N N 167 5NG N92 H921 SING N N 168 5NG N92 H922 SING N N 169 5NG C94 H941 SING N N 170 5NG O16 C15 SING N N 171 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 5NG InChI InChI 1.03 "InChI=1S/C42H70N14O32P6S2/c1-41(2,15-81-93(75,76)87-91(71,72)79-13-21-29(85-89(65,66)67)27(59)39(83-21)55-19-53-25-33(43)49-17-51-35(25)55)31(61)37(63)47-7-5-23(57)45-9-11-95-96-12-10-46-24(58)6-8-48-38(64)32(62)42(3,4)16-82-94(77,78)88-92(73,74)80-14-22-30(86-90(68,69)70)28(60)40(84-22)56-20-54-26-34(44)50-18-52-36(26)56/h17-22,27-32,39-40,59-62H,5-16H2,1-4H3,(H,45,57)(H,46,58)(H,47,63)(H,48,64)(H,71,72)(H,73,74)(H,75,76)(H,77,78)(H2,43,49,51)(H2,44,50,52)(H2,65,66,67)(H2,68,69,70)/t21-,22?,27-,28-,29-,30?,31+,32+,39-,40-/m1/s1" 5NG InChIKey InChI 1.03 YAISMNQCMHVVLO-BJLFRJKCSA-N 5NG SMILES_CANONICAL CACTVS 3.385 "CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCCC(=O)NCCSSCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O[P](O)(O)=O)n5cnc6c(N)ncnc56" 5NG SMILES CACTVS 3.385 "CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCCC(=O)NCCSSCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O[P](O)(O)=O)n5cnc6c(N)ncnc56" 5NG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CC(C)(COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCSSCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)OP(=O)(O)O)O)O" 5NG SMILES "OpenEye OEToolkits" 2.0.4 "CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)C(C(=O)NCCC(=O)NCCSSCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5ncnc6N)O)OP(=O)(O)O)O)O" # _pdbx_chem_comp_identifier.comp_id 5NG _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.4 _pdbx_chem_comp_identifier.identifier "[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{R})-4-[[3-[2-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyldisulfanyl]ethylamino]-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 5NG "Create component" 2015-10-27 RCSB 5NG "Initial release" 2016-11-09 RCSB 5NG "Other modification" 2020-05-30 RCSB 5NG "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 5NG _pdbx_chem_comp_synonyms.name CoA-disulfide _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##