data_677 # _chem_comp.id 677 _chem_comp.name "(2R,3R)-7-(methylsulfonyl)-3-(2,4,5-trifluorophenyl)-1,2,3,4-tetrahydropyrido[1,2-a]benzimidazol-2-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H16 F3 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-05-05 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 395.399 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 677 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3HAB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 677 F27 F27 F 0 1 N N N 0.560 63.757 38.933 -7.541 0.829 -0.204 F27 677 1 677 C6 C6 C 0 1 Y N N -0.519 63.646 38.149 -6.227 0.515 -0.229 C6 677 2 677 C1 C1 C 0 1 Y N N -0.548 62.719 37.114 -5.748 -0.383 -1.165 C1 677 3 677 C2 C2 C 0 1 Y N N -1.694 62.634 36.307 -4.401 -0.704 -1.190 C2 677 4 677 F22 F22 F 0 1 N N N -1.732 61.734 35.300 -3.933 -1.581 -2.105 F22 677 5 677 C5 C5 C 0 1 Y N N -1.602 64.476 38.393 -5.357 1.098 0.680 C5 677 6 677 F21 F21 F 0 1 N N N -1.527 65.374 39.387 -5.823 1.980 1.592 F21 677 7 677 C4 C4 C 0 1 Y N N -2.739 64.402 37.600 -4.012 0.776 0.654 C4 677 8 677 C3 C3 C 0 1 Y N N -2.794 63.472 36.555 -3.534 -0.126 -0.279 C3 677 9 677 C9 C9 C 0 1 N N R -4.008 63.382 35.686 -2.069 -0.475 -0.308 C9 677 10 677 C10 C10 C 0 1 N N N -5.324 63.238 36.485 -1.245 0.794 -0.557 C10 677 11 677 C14 C14 C 0 1 N N R -4.011 64.588 34.717 -1.662 -1.084 1.037 C14 677 12 677 N23 N23 N 0 1 N N N -2.749 64.654 33.983 -2.602 -2.155 1.395 N23 677 13 677 C13 C13 C 0 1 N N N -5.140 64.451 33.694 -0.247 -1.661 0.929 C13 677 14 677 N12 N12 N 0 1 Y N N -6.409 64.052 34.336 0.640 -0.642 0.360 N12 677 15 677 C11 C11 C 0 1 Y N N -6.509 63.515 35.562 0.212 0.471 -0.312 C11 677 16 677 N18 N18 N 0 1 Y N N -7.810 63.283 35.847 1.234 1.183 -0.693 N18 677 17 677 C29 C29 C 0 1 Y N N -7.639 64.177 33.797 2.004 -0.602 0.386 C29 677 18 677 C23 C23 C 0 1 Y N N -8.160 64.662 32.590 2.966 -1.451 0.920 C23 677 19 677 C22 C22 C 0 1 Y N N -9.558 64.635 32.369 4.291 -1.082 0.752 C22 677 20 677 C19 C19 C 0 1 Y N N -8.569 63.667 34.804 2.373 0.583 -0.299 C19 677 21 677 C20 C20 C 0 1 Y N N -9.941 63.653 34.546 3.719 0.930 -0.453 C20 677 22 677 C21 C21 C 0 1 Y N N -10.459 64.146 33.332 4.650 0.076 0.083 C21 677 23 677 S24 S24 S 0 1 N N N -12.075 64.111 33.044 6.360 0.466 -0.084 S24 677 24 677 O26 O26 O 0 1 N N N -12.524 65.343 32.471 6.386 1.881 -0.213 O26 677 25 677 O25 O25 O 0 1 N N N -12.266 63.081 32.046 6.977 -0.180 1.022 O25 677 26 677 C27 C27 C 0 1 N N N -12.952 63.671 34.355 6.855 -0.324 -1.639 C27 677 27 677 H1 H1 H 0 1 N N N 0.299 62.073 36.933 -6.424 -0.835 -1.877 H1 677 28 677 H4 H4 H 0 1 N N N -3.576 65.058 37.788 -3.334 1.230 1.362 H4 677 29 677 H9 H9 H 0 1 N N N -3.957 62.453 35.099 -1.881 -1.194 -1.105 H9 677 30 677 H10 H10 H 0 1 N N N -5.401 62.216 36.885 -1.379 1.122 -1.588 H10 677 31 677 H10A H10A H 0 0 N N N -5.330 63.957 37.317 -1.567 1.581 0.124 H10A 677 32 677 H14 H14 H 0 1 N N N -4.152 65.498 35.319 -1.681 -0.312 1.806 H14 677 33 677 HN23 HN23 H 0 0 N N N -2.935 64.669 33.001 -2.355 -2.573 2.279 HN23 677 34 677 HN2A HN2A H 0 0 N N N -2.256 65.485 34.242 -3.551 -1.812 1.409 HN2A 677 35 677 H13 H13 H 0 1 N N N -5.285 65.420 33.195 0.109 -1.943 1.920 H13 677 36 677 H13A H13A H 0 0 N N N -4.858 63.671 32.971 -0.259 -2.538 0.281 H13A 677 37 677 H23 H23 H 0 1 N N N -7.498 65.054 31.832 2.694 -2.356 1.443 H23 677 38 677 H22 H22 H 0 1 N N N -9.945 65.002 31.430 5.066 -1.717 1.154 H22 677 39 677 H20 H20 H 0 1 N N N -10.617 63.257 35.290 4.014 1.831 -0.973 H20 677 40 677 H27 H27 H 0 1 N N N -12.287 63.572 35.226 6.263 0.083 -2.459 H27 677 41 677 H27A H27A H 0 0 N N N -13.713 64.438 34.561 7.912 -0.132 -1.824 H27A 677 42 677 H27B H27B H 0 0 N N N -13.445 62.707 34.159 6.688 -1.399 -1.570 H27B 677 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 677 C6 F27 SING N N 1 677 C1 C6 DOUB Y N 2 677 C6 C5 SING Y N 3 677 C2 C1 SING Y N 4 677 C1 H1 SING N N 5 677 F22 C2 SING N N 6 677 C2 C3 DOUB Y N 7 677 C4 C5 DOUB Y N 8 677 C5 F21 SING N N 9 677 C3 C4 SING Y N 10 677 C4 H4 SING N N 11 677 C9 C3 SING N N 12 677 C14 C9 SING N N 13 677 C9 C10 SING N N 14 677 C9 H9 SING N N 15 677 C11 C10 SING N N 16 677 C10 H10 SING N N 17 677 C10 H10A SING N N 18 677 C13 C14 SING N N 19 677 N23 C14 SING N N 20 677 C14 H14 SING N N 21 677 N23 HN23 SING N N 22 677 N23 HN2A SING N N 23 677 C13 N12 SING N N 24 677 C13 H13 SING N N 25 677 C13 H13A SING N N 26 677 C29 N12 SING Y N 27 677 N12 C11 SING Y N 28 677 C11 N18 DOUB Y N 29 677 C19 N18 SING Y N 30 677 C23 C29 DOUB Y N 31 677 C29 C19 SING Y N 32 677 C22 C23 SING Y N 33 677 C23 H23 SING N N 34 677 C22 C21 DOUB Y N 35 677 C22 H22 SING N N 36 677 C20 C19 DOUB Y N 37 677 C21 C20 SING Y N 38 677 C20 H20 SING N N 39 677 S24 C21 SING N N 40 677 O25 S24 DOUB N N 41 677 O26 S24 DOUB N N 42 677 S24 C27 SING N N 43 677 C27 H27 SING N N 44 677 C27 H27A SING N N 45 677 C27 H27B SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 677 SMILES ACDLabs 10.04 "O=S(=O)(c2cc1nc4n(c1cc2)CC(N)C(c3cc(F)c(F)cc3F)C4)C" 677 SMILES_CANONICAL CACTVS 3.341 "C[S](=O)(=O)c1ccc2n3C[C@H](N)[C@H](Cc3nc2c1)c4cc(F)c(F)cc4F" 677 SMILES CACTVS 3.341 "C[S](=O)(=O)c1ccc2n3C[CH](N)[CH](Cc3nc2c1)c4cc(F)c(F)cc4F" 677 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CS(=O)(=O)c1ccc2c(c1)nc3n2C[C@@H]([C@H](C3)c4cc(c(cc4F)F)F)N" 677 SMILES "OpenEye OEToolkits" 1.5.0 "CS(=O)(=O)c1ccc2c(c1)nc3n2CC(C(C3)c4cc(c(cc4F)F)F)N" 677 InChI InChI 1.03 "InChI=1S/C18H16F3N3O2S/c1-27(25,26)9-2-3-17-16(4-9)23-18-6-11(15(22)8-24(17)18)10-5-13(20)14(21)7-12(10)19/h2-5,7,11,15H,6,8,22H2,1H3/t11-,15+/m1/s1" 677 InChIKey InChI 1.03 HJJAYSSCWGUPKO-ABAIWWIYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 677 "SYSTEMATIC NAME" ACDLabs 10.04 "(2R,3R)-7-(methylsulfonyl)-3-(2,4,5-trifluorophenyl)-1,2,3,4-tetrahydropyrido[1,2-a]benzimidazol-2-amine" 677 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R)-7-methylsulfonyl-3-(2,4,5-trifluorophenyl)-1,2,3,4-tetrahydropyrido[1,6-a]benzimidazol-2-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 677 "Create component" 2009-05-05 RCSB 677 "Modify aromatic_flag" 2011-06-04 RCSB 677 "Modify descriptor" 2011-06-04 RCSB #