data_678 # _chem_comp.id 678 _chem_comp.name "(3-{5-[AMINO(IMINIO)METHYL]-1H-INDOL-2-YL}-5-BROMO-4-OXIDOPHENYL)ACETATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H13 Br N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms CRA_9678 _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 2003-03-14 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 387.207 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 678 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1O3L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 678 C1 C1 C 0 1 Y N N 43.970 -2.965 26.086 5.396 0.084 -0.028 C1 678 1 678 C2 C2 C 0 1 Y N N 44.255 -1.580 26.191 5.215 1.350 -0.601 C2 678 2 678 C3 C3 C 0 1 Y N N 44.133 -0.869 27.386 3.963 1.868 -0.764 C3 678 3 678 C4 C4 C 0 1 Y N N 43.713 -1.570 28.478 2.845 1.142 -0.360 C4 678 4 678 C5 C5 C 0 1 Y N N 43.408 -2.866 28.457 3.014 -0.133 0.218 C5 678 5 678 C6 C6 C 0 1 Y N N 43.526 -3.606 27.278 4.294 -0.661 0.378 C6 678 6 678 C7 C7 C 0 1 N N N 44.115 -3.663 24.848 6.759 -0.462 0.141 C7 678 7 678 N1 N1 N 0 1 N N N 43.823 -4.944 24.743 6.932 -1.665 0.686 N1 678 8 678 N2 N2 N 1 1 N N N 44.554 -3.050 23.768 7.815 0.249 -0.252 N2 678 9 678 N3 N3 N 0 1 Y N N 43.501 -1.133 29.707 1.495 1.401 -0.397 N3 678 10 678 CN4 CN4 C 0 1 Y N N 43.026 -3.175 29.704 1.670 -0.623 0.527 CN4 678 11 678 C8 C8 C 0 1 Y N N 43.074 -2.079 30.538 0.800 0.340 0.136 C8 678 12 678 "C1'" "C1'" C 0 1 Y N N 42.917 -1.929 31.948 -0.671 0.262 0.263 "C1'" 678 13 678 "C2'" "C2'" C 0 1 Y N N 42.646 -3.042 32.797 -1.402 1.388 0.644 "C2'" 678 14 678 "C3'" "C3'" C 0 1 Y N N 42.485 -2.933 34.197 -2.775 1.309 0.760 "C3'" 678 15 678 "CV'" "C31'" C 0 1 N N N 42.181 -4.233 35.015 -3.564 2.525 1.172 "CV'" 678 16 678 "CW'" "C32'" C 0 1 N N N 42.093 -4.074 36.524 -3.964 3.303 -0.055 "CW'" 678 17 678 "OX'" "O33'" O 0 1 N N N 41.063 -3.606 36.958 -3.639 2.907 -1.162 "OX'" 678 18 678 "OY'" "O34'" O -1 1 N N N 43.032 -4.479 37.192 -4.613 4.330 0.058 "OY'" 678 19 678 "C4'" "C4'" C 0 1 Y N N 42.596 -1.683 34.779 -3.430 0.118 0.500 "C4'" 678 20 678 "C5'" "C5'" C 0 1 Y N N 42.860 -0.610 33.964 -2.716 -1.004 0.123 "C5'" 678 21 678 "C6'" "C6'" C 0 1 Y N N 43.014 -0.713 32.582 -1.337 -0.940 -0.005 "C6'" 678 22 678 "O6'" "O6'" O -1 1 N N N 43.253 0.422 31.850 -0.634 -2.041 -0.376 "O6'" 678 23 678 "BR5'" "BR5'" BR 0 0 N N N 43.026 1.147 34.725 -3.622 -2.626 -0.230 "BR5'" 678 24 678 HC2 HC2 H 0 1 N N N 44.599 -1.048 25.321 6.075 1.921 -0.917 HC2 678 25 678 HC3 HC3 H 0 1 N N N 44.358 0.185 27.440 3.839 2.845 -1.207 HC3 678 26 678 HC6 HC6 H 0 1 N N N 43.279 -4.660 27.278 4.429 -1.640 0.815 HC6 678 27 678 HH11 HH11 H 0 0 N N N 43.487 -5.438 25.542 7.826 -2.023 0.797 HH11 678 28 678 HH12 HH12 H 0 0 N N N 43.918 -5.418 23.870 6.163 -2.183 0.972 HH12 678 29 678 HH21 HH21 H 0 0 N N N 44.785 -2.077 23.765 7.689 1.125 -0.649 HH21 678 30 678 HH22 HH22 H 0 0 N N N 44.635 -3.579 22.924 8.709 -0.107 -0.138 HH22 678 31 678 HN3 HN3 H 0 1 N N N 43.646 -0.210 29.977 1.093 2.212 -0.747 HN3 678 32 678 HCN4 HCN4 H 0 0 N N N 42.723 -4.148 30.031 1.420 -1.571 0.980 HCN4 678 33 678 "HC2'" "HC2'" H 0 0 N N N 42.548 -4.031 32.378 -0.895 2.319 0.847 "HC2'" 678 34 678 H31B H31B H 0 0 N N N 41.260 -4.650 34.673 -2.951 3.155 1.817 H31B 678 35 678 H31A H31A H 0 0 N N N 42.916 -4.981 34.771 -4.457 2.213 1.712 H31A 678 36 678 "HC4'" "HC4'" H 0 0 N N N 42.490 -1.518 35.845 -4.505 0.065 0.594 "HC4'" 678 37 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 678 C1 C2 DOUB Y N 1 678 C1 C6 SING Y N 2 678 C1 C7 SING N N 3 678 C2 C3 SING Y N 4 678 C2 HC2 SING N N 5 678 C3 C4 DOUB Y N 6 678 C3 HC3 SING N N 7 678 C4 C5 SING Y N 8 678 C4 N3 SING Y N 9 678 C5 C6 DOUB Y N 10 678 C5 CN4 SING Y N 11 678 C6 HC6 SING N N 12 678 C7 N1 SING N N 13 678 C7 N2 DOUB N N 14 678 N1 HH11 SING N N 15 678 N1 HH12 SING N N 16 678 N2 HH21 SING N N 17 678 N2 HH22 SING N N 18 678 N3 C8 SING Y N 19 678 N3 HN3 SING N N 20 678 CN4 C8 DOUB Y N 21 678 CN4 HCN4 SING N N 22 678 C8 "C1'" SING Y N 23 678 "C1'" "C2'" DOUB Y N 24 678 "C1'" "C6'" SING Y N 25 678 "C2'" "C3'" SING Y N 26 678 "C2'" "HC2'" SING N N 27 678 "C3'" "CV'" SING N N 28 678 "C3'" "C4'" DOUB Y N 29 678 "CV'" "CW'" SING N N 30 678 "CV'" H31B SING N N 31 678 "CV'" H31A SING N N 32 678 "CW'" "OX'" DOUB N N 33 678 "CW'" "OY'" SING N N 34 678 "C4'" "C5'" SING Y N 35 678 "C4'" "HC4'" SING N N 36 678 "C5'" "C6'" DOUB Y N 37 678 "C5'" "BR5'" SING N N 38 678 "C6'" "O6'" SING N N 39 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 678 SMILES ACDLabs 10.04 "[O-]C(=O)Cc3cc(c2cc1cc(ccc1n2)\C(=[NH2+])N)c([O-])c(Br)c3" 678 SMILES_CANONICAL CACTVS 3.341 "NC(=[NH2+])c1ccc2[nH]c(cc2c1)c3cc(CC([O-])=O)cc(Br)c3[O-]" 678 SMILES CACTVS 3.341 "NC(=[NH2+])c1ccc2[nH]c(cc2c1)c3cc(CC([O-])=O)cc(Br)c3[O-]" 678 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc2c(cc1C(=[NH2+])N)cc([nH]2)c3cc(cc(c3[O-])Br)CC(=O)[O-]" 678 SMILES "OpenEye OEToolkits" 1.5.0 "c1cc2c(cc1C(=[NH2+])N)cc([nH]2)c3cc(cc(c3[O-])Br)CC(=O)[O-]" 678 InChI InChI 1.03 "InChI=1S/C17H14BrN3O3/c18-12-4-8(5-15(22)23)3-11(16(12)24)14-7-10-6-9(17(19)20)1-2-13(10)21-14/h1-4,6-7,21,24H,5H2,(H3,19,20)(H,22,23)/p-1" 678 InChIKey InChI 1.03 VIZNZQTZRMTYPZ-UHFFFAOYSA-M # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 678 "SYSTEMATIC NAME" ACDLabs 10.04 "(3-{5-[amino(iminio)methyl]-1H-indol-2-yl}-5-bromo-4-oxidophenyl)acetate" 678 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[3-[5-(amino-azaniumylidene-methyl)-1H-indol-2-yl]-5-bromo-4-oxido-phenyl]ethanoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 678 "Create component" 2003-03-14 RCSB 678 "Modify aromatic_flag" 2011-06-04 RCSB 678 "Modify descriptor" 2011-06-04 RCSB 678 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 678 _pdbx_chem_comp_synonyms.name CRA_9678 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##