data_6AJ # _chem_comp.id 6AJ _chem_comp.name "2-({2-[(3R)-3-aminopiperidin-1-yl]-5-methyl-6,9-dioxo-5,6,7,9-tetrahydro-1H-imidazo[1,2-a]purin-1-yl}methyl)-4-fluorobenzonitrile" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H21 F N8 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-02-26 _chem_comp.pdbx_modified_date 2016-06-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 436.442 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6AJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5I7U _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6AJ C1 C1 C 0 1 Y N N 36.996 49.169 37.154 0.810 2.253 -0.451 C1 6AJ 1 6AJ C2 C2 C 0 1 Y N N 36.427 47.979 36.605 -0.161 3.162 -0.814 C2 6AJ 2 6AJ C3 C3 C 0 1 Y N N 35.068 48.011 36.218 -0.430 4.254 -0.003 C3 6AJ 3 6AJ C4 C4 C 0 1 Y N N 34.250 49.123 36.354 0.275 4.439 1.176 C4 6AJ 4 6AJ C5 C5 C 0 1 Y N N 34.811 50.326 36.896 1.249 3.536 1.549 C5 6AJ 5 6AJ C6 C6 C 0 1 Y N N 36.185 50.327 37.298 1.524 2.434 0.736 C6 6AJ 6 6AJ C7 C7 C 0 1 N N N 37.598 48.523 40.617 -1.979 0.189 -0.735 C7 6AJ 7 6AJ C8 C8 C 0 1 Y N N 38.554 49.446 40.006 -0.762 -0.455 -0.476 C8 6AJ 8 6AJ C9 C9 C 0 1 Y N N 39.355 50.294 40.784 -0.782 -1.707 0.150 C9 6AJ 9 6AJ C11 C10 C 0 1 Y N N 39.936 50.695 38.796 1.302 -1.192 -0.215 C11 6AJ 10 6AJ C15 C11 C 0 1 N N N 38.460 49.055 37.463 1.097 1.064 -1.331 C15 6AJ 11 6AJ C17 C12 C 0 1 N N N 40.802 52.610 37.681 3.154 -2.328 0.668 C17 6AJ 12 6AJ C18 C13 C 0 1 N N R 41.161 53.119 36.274 4.683 -2.298 0.723 C18 6AJ 13 6AJ C19 C14 C 0 1 N N N 42.366 52.285 35.693 5.243 -2.523 -0.685 C19 6AJ 14 6AJ C20 C15 C 0 1 N N N 42.074 50.724 35.763 4.691 -1.446 -1.623 C20 6AJ 15 6AJ C21 C16 C 0 1 N N N 41.645 50.280 37.175 3.162 -1.500 -1.610 C21 6AJ 16 6AJ C30 C17 C 0 1 N N N 36.721 51.531 37.790 2.530 1.491 1.121 C30 6AJ 17 6AJ C26 C18 C 0 1 N N N 37.486 48.148 44.240 -5.305 -1.168 0.111 C26 6AJ 18 6AJ C23 C19 C 0 1 N N N 38.539 49.418 42.720 -3.106 -1.646 0.239 C23 6AJ 19 6AJ C25 C20 C 0 1 N N N 36.885 47.721 42.909 -4.530 -0.020 -0.501 C25 6AJ 20 6AJ C29 C21 C 0 1 N N N 39.156 49.779 45.136 -4.719 -3.338 1.166 C29 6AJ 21 6AJ N31 N1 N 0 1 N N N 37.157 52.506 38.188 3.328 0.742 1.426 N31 6AJ 22 6AJ N10 N2 N 0 1 Y N N 40.159 51.083 40.043 0.495 -2.103 0.282 N10 6AJ 23 6AJ N13 N3 N 0 1 N N N 39.349 50.291 42.200 -1.962 -2.257 0.485 N13 6AJ 24 6AJ N12 N4 N 0 1 Y N N 38.932 49.692 38.727 0.573 -0.149 -0.698 N12 6AJ 25 6AJ N16 N5 N 0 1 N N N 40.547 51.159 37.673 2.675 -1.279 -0.242 N16 6AJ 26 6AJ N24 N6 N 0 1 N N N 37.649 48.556 42.000 -3.122 -0.426 -0.370 N24 6AJ 27 6AJ N27 N7 N 0 1 N N N 38.415 49.148 44.049 -4.391 -2.068 0.515 N27 6AJ 28 6AJ N22 N8 N 0 1 N N N 39.889 52.901 35.454 5.131 -0.993 1.227 N22 6AJ 29 6AJ O14 O1 O 0 1 N N N 36.848 47.777 40.033 -2.003 1.283 -1.275 O14 6AJ 30 6AJ O28 O2 O 0 1 N N N 37.191 47.671 45.335 -6.509 -1.257 0.216 O28 6AJ 31 6AJ F32 F1 F 0 1 N N N 34.599 46.895 35.701 -1.382 5.142 -0.364 F32 6AJ 32 6AJ H1 H1 H 0 1 N N N 37.017 47.082 36.489 -0.713 3.023 -1.732 H1 6AJ 33 6AJ H2 H2 H 0 1 N N N 33.212 49.083 36.058 0.062 5.292 1.803 H2 6AJ 34 6AJ H3 H3 H 0 1 N N N 34.208 51.216 36.999 1.797 3.681 2.468 H3 6AJ 35 6AJ H4 H4 H 0 1 N N N 38.706 47.984 37.518 0.618 1.204 -2.300 H4 6AJ 36 6AJ H5 H5 H 0 1 N N N 39.013 49.516 36.631 2.174 0.965 -1.469 H5 6AJ 37 6AJ H6 H6 H 0 1 N N N 41.637 52.824 38.364 2.822 -3.301 0.307 H6 6AJ 38 6AJ H7 H7 H 0 1 N N N 39.899 53.131 38.032 2.752 -2.153 1.666 H7 6AJ 39 6AJ H8 H8 H 0 1 N N N 41.423 54.187 36.306 5.039 -3.087 1.386 H8 6AJ 40 6AJ H9 H9 H 0 1 N N N 43.271 52.507 36.278 6.331 -2.460 -0.658 H9 6AJ 41 6AJ H10 H10 H 0 1 N N N 42.528 52.573 34.644 4.943 -3.507 -1.043 H10 6AJ 42 6AJ H11 H11 H 0 1 N N N 41.269 50.481 35.054 5.024 -0.465 -1.286 H11 6AJ 43 6AJ H12 H12 H 0 1 N N N 42.987 50.179 35.481 5.052 -1.626 -2.636 H12 6AJ 44 6AJ H13 H13 H 0 1 N N N 41.291 49.239 37.138 2.765 -0.725 -2.266 H13 6AJ 45 6AJ H14 H14 H 0 1 N N N 42.506 50.350 37.856 2.829 -2.477 -1.960 H14 6AJ 46 6AJ H15 H15 H 0 1 N N N 35.809 47.943 42.858 -4.795 0.102 -1.551 H15 6AJ 47 6AJ H16 H16 H 0 1 N N N 37.048 46.651 42.713 -4.716 0.902 0.049 H16 6AJ 48 6AJ H17 H17 H 0 1 N N N 38.835 49.350 46.097 -4.753 -3.194 2.246 H17 6AJ 49 6AJ H18 H18 H 0 1 N N N 40.233 49.602 44.997 -5.690 -3.687 0.815 H18 6AJ 50 6AJ H19 H19 H 0 1 N N N 38.959 50.861 45.134 -3.957 -4.078 0.923 H19 6AJ 51 6AJ H20 H20 H 0 1 N N N 39.143 53.441 35.845 6.126 -0.994 1.398 H20 6AJ 52 6AJ H21 H21 H 0 1 N N N 40.048 53.187 34.509 4.873 -0.252 0.593 H21 6AJ 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6AJ N22 C18 SING N N 1 6AJ C19 C20 SING N N 2 6AJ C19 C18 SING N N 3 6AJ F32 C3 SING N N 4 6AJ C20 C21 SING N N 5 6AJ C3 C4 DOUB Y N 6 6AJ C3 C2 SING Y N 7 6AJ C18 C17 SING N N 8 6AJ C4 C5 SING Y N 9 6AJ C2 C1 DOUB Y N 10 6AJ C5 C6 DOUB Y N 11 6AJ C1 C6 SING Y N 12 6AJ C1 C15 SING N N 13 6AJ C21 N16 SING N N 14 6AJ C6 C30 SING N N 15 6AJ C15 N12 SING N N 16 6AJ N16 C17 SING N N 17 6AJ N16 C11 SING N N 18 6AJ C30 N31 TRIP N N 19 6AJ N12 C11 SING Y N 20 6AJ N12 C8 SING Y N 21 6AJ C11 N10 DOUB Y N 22 6AJ C8 C7 SING N N 23 6AJ C8 C9 DOUB Y N 24 6AJ O14 C7 DOUB N N 25 6AJ N10 C9 SING Y N 26 6AJ C7 N24 SING N N 27 6AJ C9 N13 SING N N 28 6AJ N24 C23 SING N N 29 6AJ N24 C25 SING N N 30 6AJ N13 C23 DOUB N N 31 6AJ C23 N27 SING N N 32 6AJ C25 C26 SING N N 33 6AJ N27 C26 SING N N 34 6AJ N27 C29 SING N N 35 6AJ C26 O28 DOUB N N 36 6AJ C2 H1 SING N N 37 6AJ C4 H2 SING N N 38 6AJ C5 H3 SING N N 39 6AJ C15 H4 SING N N 40 6AJ C15 H5 SING N N 41 6AJ C17 H6 SING N N 42 6AJ C17 H7 SING N N 43 6AJ C18 H8 SING N N 44 6AJ C19 H9 SING N N 45 6AJ C19 H10 SING N N 46 6AJ C20 H11 SING N N 47 6AJ C20 H12 SING N N 48 6AJ C21 H13 SING N N 49 6AJ C21 H14 SING N N 50 6AJ C25 H15 SING N N 51 6AJ C25 H16 SING N N 52 6AJ C29 H17 SING N N 53 6AJ C29 H18 SING N N 54 6AJ C29 H19 SING N N 55 6AJ N22 H20 SING N N 56 6AJ N22 H21 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6AJ SMILES ACDLabs 12.01 "c1(c(ccc(c1)F)C#N)Cn4c3C(N2C(N(C(=O)C2)C)=Nc3nc4N5CC(CCC5)N)=O" 6AJ InChI InChI 1.03 "InChI=1S/C21H21FN8O2/c1-27-16(31)11-30-19(32)17-18(25-20(27)30)26-21(28-6-2-3-15(24)10-28)29(17)9-13-7-14(22)5-4-12(13)8-23/h4-5,7,15H,2-3,6,9-11,24H2,1H3/t15-/m1/s1" 6AJ InChIKey InChI 1.03 KMOYVYIQCXEQDG-OAHLLOKOSA-N 6AJ SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)CN2C(=O)c3n(Cc4cc(F)ccc4C#N)c(nc3N=C12)N5CCC[C@@H](N)C5" 6AJ SMILES CACTVS 3.385 "CN1C(=O)CN2C(=O)c3n(Cc4cc(F)ccc4C#N)c(nc3N=C12)N5CCC[CH](N)C5" 6AJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CN1C(=O)CN2C1=Nc3c(n(c(n3)N4CCC[C@H](C4)N)Cc5cc(ccc5C#N)F)C2=O" 6AJ SMILES "OpenEye OEToolkits" 2.0.4 "CN1C(=O)CN2C1=Nc3c(n(c(n3)N4CCCC(C4)N)Cc5cc(ccc5C#N)F)C2=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6AJ "SYSTEMATIC NAME" ACDLabs 12.01 "2-({2-[(3R)-3-aminopiperidin-1-yl]-5-methyl-6,9-dioxo-5,6,7,9-tetrahydro-1H-imidazo[1,2-a]purin-1-yl}methyl)-4-fluorobenzonitrile" 6AJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "2-[[2-[(3~{R})-3-azanylpiperidin-1-yl]-5-methyl-6,9-bis(oxidanylidene)-7~{H}-imidazo[1,2-a]purin-1-yl]methyl]-4-fluoranyl-benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6AJ "Create component" 2016-02-26 RCSB 6AJ "Initial release" 2016-06-08 RCSB #