data_6T2 # _chem_comp.id 6T2 _chem_comp.name "1-(2-{5-[(3-Methyloxetan-3-yl)methoxy]-1H-benzimidazol-1-yl}quinolin-8-yl)piperidin-4-amine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H29 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Crenolanib _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-06-17 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 443.541 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6T2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5LBY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6T2 C1 C1 C 0 1 Y N N 0.100 -11.315 15.902 0.873 -4.155 0.021 C1 6T2 1 6T2 C2 C2 C 0 1 Y N N -0.096 -8.891 16.218 2.379 -2.207 0.041 C2 6T2 2 6T2 C3 C3 C 0 1 Y N N -1.173 -9.027 17.119 3.527 -3.010 0.074 C3 6T2 3 6T2 C4 C4 C 0 1 Y N N -1.733 -7.889 17.626 4.760 -2.431 0.093 C4 6T2 4 6T2 C5 C5 C 0 1 N N N 6.308 -10.487 13.083 -4.426 0.220 -0.131 C5 6T2 5 6T2 C6 C6 C 0 1 Y N N -1.175 -6.640 17.333 4.837 -1.023 0.078 C6 6T2 6 6T2 C7 C7 C 0 1 Y N N -0.068 -6.568 16.473 3.639 -0.269 0.045 C7 6T2 7 6T2 C9 C8 C 0 1 Y N N 1.741 -10.116 15.064 -0.101 -2.169 -0.016 C9 6T2 8 6T2 C10 C9 C 0 1 Y N N 2.016 -11.460 14.915 -1.073 -3.184 -0.036 C10 6T2 9 6T2 C11 C10 C 0 1 Y N N 0.504 -5.285 16.199 3.716 1.140 0.030 C11 6T2 10 6T2 C12 C11 C 0 1 Y N N 3.194 -11.912 14.332 -2.426 -2.841 -0.071 C12 6T2 11 6T2 C13 C12 C 0 1 Y N N 4.105 -10.931 13.915 -2.795 -1.510 -0.086 C13 6T2 12 6T2 C14 C13 C 0 1 Y N N -0.074 -4.180 16.735 4.951 1.753 0.048 C14 6T2 13 6T2 C15 C14 C 0 1 Y N N -1.169 -4.228 17.602 6.120 0.999 0.080 C15 6T2 14 6T2 C30 C15 C 0 1 N N N 1.886 -3.968 14.713 2.464 2.783 1.173 C30 6T2 15 6T2 C40 C16 C 0 1 N N N 2.952 -4.037 13.691 1.112 3.499 1.178 C40 6T2 16 6T2 C50 C17 C 0 1 N N N 4.267 -4.523 14.318 0.971 4.322 -0.106 C50 6T2 17 6T2 N80 N1 N 0 1 N N N 5.324 -4.665 13.304 -0.350 4.965 -0.134 N80 6T2 18 6T2 C60 C18 C 0 1 N N N 4.005 -5.879 15.012 1.113 3.394 -1.316 C60 6T2 19 6T2 C70 C19 C 0 1 N N N 2.863 -5.813 16.016 2.466 2.681 -1.248 C70 6T2 20 6T2 N4 N2 N 0 1 N N N 1.621 -5.284 15.350 2.552 1.907 -0.003 N4 6T2 21 6T2 N3 N3 N 0 1 Y N N 0.450 -7.719 15.943 2.458 -0.894 0.028 N3 6T2 22 6T2 C16 C20 C 0 1 Y N N -1.723 -5.451 17.876 6.076 -0.362 0.095 C16 6T2 23 6T2 N1 N4 N 0 1 Y N N 0.524 -10.027 15.703 1.124 -2.815 0.017 N1 6T2 24 6T2 N2 N5 N 0 1 Y N N 0.969 -12.205 15.416 -0.409 -4.370 -0.014 N2 6T2 25 6T2 C19 C21 C 0 1 Y N N 2.609 -9.166 14.593 -0.488 -0.837 -0.035 C19 6T2 26 6T2 C18 C22 C 0 1 Y N N 3.789 -9.597 14.026 -1.827 -0.511 -0.067 C18 6T2 27 6T2 O1 O1 O 0 1 N N N 5.283 -11.450 13.399 -4.112 -1.174 -0.119 O1 6T2 28 6T2 C23 C23 C 0 1 N N N 7.556 -11.318 12.782 -5.945 0.400 -0.167 C23 6T2 29 6T2 C27 C24 C 0 1 N N N 8.192 -11.940 14.019 -6.619 -0.426 -1.265 C27 6T2 30 6T2 C24 C25 C 0 1 N N N 8.644 -10.487 12.079 -6.398 1.872 -0.130 C24 6T2 31 6T2 O2 O2 O 0 1 N N N 8.431 -11.644 10.963 -7.393 1.424 0.812 O2 6T2 32 6T2 C26 C26 C 0 1 N N N 7.480 -12.287 11.686 -6.620 0.271 1.211 C26 6T2 33 6T2 H1 H1 H 0 1 N N N -0.825 -11.578 16.393 1.629 -4.926 0.044 H1 6T2 34 6T2 H2 H2 H 0 1 N N N -1.544 -10.002 17.400 3.434 -4.086 0.085 H2 6T2 35 6T2 H3 H3 H 0 1 N N N -2.609 -7.954 18.255 5.656 -3.034 0.118 H3 6T2 36 6T2 H4 H4 H 0 1 N N N 6.486 -9.818 13.938 -4.026 0.690 0.767 H4 6T2 37 6T2 H5 H5 H 0 1 N N N 6.020 -9.891 12.205 -3.984 0.684 -1.012 H5 6T2 38 6T2 H6 H6 H 0 1 N N N 3.397 -12.965 14.207 -3.181 -3.613 -0.086 H6 6T2 39 6T2 H7 H7 H 0 1 N N N 0.334 -3.213 16.478 5.011 2.831 0.037 H7 6T2 40 6T2 H8 H8 H 0 1 N N N -1.567 -3.327 18.044 7.076 1.501 0.094 H8 6T2 41 6T2 H9 H9 H 0 1 N N N 2.190 -3.254 15.492 3.266 3.521 1.136 H9 6T2 42 6T2 H10 H10 H 0 1 N N N 0.961 -3.615 14.234 2.562 2.185 2.079 H10 6T2 43 6T2 H11 H11 H 0 1 N N N 3.105 -3.037 13.259 0.310 2.763 1.228 H11 6T2 44 6T2 H12 H12 H 0 1 N N N 2.649 -4.737 12.898 1.054 4.161 2.042 H12 6T2 45 6T2 H13 H13 H 0 1 N N N 4.584 -3.796 15.080 1.749 5.084 -0.138 H13 6T2 46 6T2 H14 H14 H 0 1 N N N 6.166 -4.982 13.741 -0.467 5.514 -0.972 H14 6T2 47 6T2 H15 H15 H 0 1 N N N 5.037 -5.329 12.614 -1.087 4.282 -0.043 H15 6T2 48 6T2 H17 H17 H 0 1 N N N 3.755 -6.625 14.244 0.312 2.655 -1.304 H17 6T2 49 6T2 H18 H18 H 0 1 N N N 4.920 -6.187 15.539 1.056 3.980 -2.233 H18 6T2 50 6T2 H19 H19 H 0 1 N N N 2.664 -6.821 16.408 2.565 2.008 -2.101 H19 6T2 51 6T2 H20 H20 H 0 1 N N N 3.144 -5.146 16.844 3.267 3.419 -1.273 H20 6T2 52 6T2 H21 H21 H 0 1 N N N -2.591 -5.510 18.516 6.992 -0.933 0.120 H21 6T2 53 6T2 H22 H22 H 0 1 N N N 2.376 -8.114 14.664 0.259 -0.057 -0.022 H22 6T2 54 6T2 H23 H23 H 0 1 N N N 4.489 -8.862 13.656 -2.126 0.527 -0.079 H23 6T2 55 6T2 H24 H24 H 0 1 N N N 8.236 -11.192 14.824 -6.278 -1.459 -1.203 H24 6T2 56 6T2 H25 H25 H 0 1 N N N 7.589 -12.799 14.349 -7.701 -0.392 -1.133 H25 6T2 57 6T2 H26 H26 H 0 1 N N N 9.210 -12.279 13.777 -6.359 -0.015 -2.240 H26 6T2 58 6T2 H27 H27 H 0 1 N N N 9.628 -10.463 12.570 -5.659 2.550 0.298 H27 6T2 59 6T2 H28 H28 H 0 1 N N N 8.358 -9.468 11.781 -6.810 2.231 -1.073 H28 6T2 60 6T2 H29 H29 H 0 1 N N N 6.497 -12.313 11.192 -7.212 -0.636 1.332 H29 6T2 61 6T2 H30 H30 H 0 1 N N N 7.769 -13.306 11.982 -5.949 0.460 2.049 H30 6T2 62 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6T2 O2 C26 SING N N 1 6T2 O2 C24 SING N N 2 6T2 C26 C23 SING N N 3 6T2 C24 C23 SING N N 4 6T2 C23 C5 SING N N 5 6T2 C23 C27 SING N N 6 6T2 C5 O1 SING N N 7 6T2 N80 C50 SING N N 8 6T2 O1 C13 SING N N 9 6T2 C40 C50 SING N N 10 6T2 C40 C30 SING N N 11 6T2 C13 C18 DOUB Y N 12 6T2 C13 C12 SING Y N 13 6T2 C18 C19 SING Y N 14 6T2 C50 C60 SING N N 15 6T2 C12 C10 DOUB Y N 16 6T2 C19 C9 DOUB Y N 17 6T2 C30 N4 SING N N 18 6T2 C10 C9 SING Y N 19 6T2 C10 N2 SING Y N 20 6T2 C60 C70 SING N N 21 6T2 C9 N1 SING Y N 22 6T2 N4 C70 SING N N 23 6T2 N4 C11 SING N N 24 6T2 N2 C1 DOUB Y N 25 6T2 N1 C1 SING Y N 26 6T2 N1 C2 SING N N 27 6T2 N3 C2 DOUB Y N 28 6T2 N3 C7 SING Y N 29 6T2 C11 C7 DOUB Y N 30 6T2 C11 C14 SING Y N 31 6T2 C2 C3 SING Y N 32 6T2 C7 C6 SING Y N 33 6T2 C14 C15 DOUB Y N 34 6T2 C3 C4 DOUB Y N 35 6T2 C6 C4 SING Y N 36 6T2 C6 C16 DOUB Y N 37 6T2 C15 C16 SING Y N 38 6T2 C1 H1 SING N N 39 6T2 C3 H2 SING N N 40 6T2 C4 H3 SING N N 41 6T2 C5 H4 SING N N 42 6T2 C5 H5 SING N N 43 6T2 C12 H6 SING N N 44 6T2 C14 H7 SING N N 45 6T2 C15 H8 SING N N 46 6T2 C30 H9 SING N N 47 6T2 C30 H10 SING N N 48 6T2 C40 H11 SING N N 49 6T2 C40 H12 SING N N 50 6T2 C50 H13 SING N N 51 6T2 N80 H14 SING N N 52 6T2 N80 H15 SING N N 53 6T2 C60 H17 SING N N 54 6T2 C60 H18 SING N N 55 6T2 C70 H19 SING N N 56 6T2 C70 H20 SING N N 57 6T2 C16 H21 SING N N 58 6T2 C19 H22 SING N N 59 6T2 C18 H23 SING N N 60 6T2 C27 H24 SING N N 61 6T2 C27 H25 SING N N 62 6T2 C27 H26 SING N N 63 6T2 C24 H27 SING N N 64 6T2 C24 H28 SING N N 65 6T2 C26 H29 SING N N 66 6T2 C26 H30 SING N N 67 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6T2 InChI InChI 1.03 "InChI=1S/C26H29N5O2/c1-26(14-32-15-26)16-33-20-6-7-22-21(13-20)28-17-31(22)24-8-5-18-3-2-4-23(25(18)29-24)30-11-9-19(27)10-12-30/h2-8,13,17,19H,9-12,14-16,27H2,1H3" 6T2 InChIKey InChI 1.03 DYNHJHQFHQTFTP-UHFFFAOYSA-N 6T2 SMILES_CANONICAL CACTVS 3.385 "CC1(COC1)COc2ccc3n(cnc3c2)c4ccc5cccc(N6CCC(N)CC6)c5n4" 6T2 SMILES CACTVS 3.385 "CC1(COC1)COc2ccc3n(cnc3c2)c4ccc5cccc(N6CCC(N)CC6)c5n4" 6T2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "CC1(COC1)COc2ccc3c(c2)ncn3c4ccc5cccc(c5n4)N6CCC(CC6)N" 6T2 SMILES "OpenEye OEToolkits" 2.0.5 "CC1(COC1)COc2ccc3c(c2)ncn3c4ccc5cccc(c5n4)N6CCC(CC6)N" # _pdbx_chem_comp_identifier.comp_id 6T2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.5 _pdbx_chem_comp_identifier.identifier "1-[2-[5-[(3-methyloxetan-3-yl)methoxy]benzimidazol-1-yl]quinolin-8-yl]piperidin-4-amine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6T2 "Create component" 2016-06-17 EBI 6T2 "Modify synonyms" 2016-07-15 EBI 6T2 "Initial release" 2017-11-29 RCSB 6T2 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 6T2 _pdbx_chem_comp_synonyms.name Crenolanib _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##