data_76J # _chem_comp.id 76J _chem_comp.name "[(2~{S},5~{S})-1-[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]-5-azaniumyl-6-oxidanyl-6-oxidanylidene-hexan-2-yl]-pentyl-azanium" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H35 N7 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2016-09-06 _chem_comp.pdbx_modified_date 2016-09-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 453.536 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 76J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5LT6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 76J C1 C1 C 0 1 N N N 21.853 12.064 63.465 -6.503 5.287 2.486 C1 76J 1 76J C2 C2 C 0 1 N N N 21.581 13.529 63.746 -5.636 4.924 1.279 C2 76J 2 76J C3 C3 C 0 1 N N N 20.100 13.886 63.882 -5.102 3.500 1.444 C3 76J 3 76J C5 C4 C 0 1 N N N 17.836 13.195 64.805 -3.702 1.713 0.401 C5 76J 4 76J C7 C5 C 0 1 N N S 16.492 14.222 66.739 -2.255 0.048 -0.542 C7 76J 5 76J C8 C6 C 0 1 N N N 16.873 14.871 68.073 -3.346 -1.025 -0.513 C8 76J 6 76J C10 C7 C 0 1 N N S 15.349 14.355 69.989 -3.829 -3.422 -0.001 C10 76J 7 76J C12 C8 C 0 1 N N N 15.027 13.353 71.114 -3.209 -4.776 0.233 C12 76J 8 76J C15 C9 C 0 1 N N N 15.612 15.099 65.820 -1.277 -0.251 -1.680 C15 76J 9 76J C16 C10 C 0 1 N N R 14.275 15.599 66.410 -0.119 0.748 -1.633 C16 76J 10 76J O17 O1 O 0 1 N N N 14.462 16.436 67.572 0.659 0.539 -0.442 O17 76J 11 76J C19 C11 C 0 1 N N R 12.564 17.281 66.431 2.193 0.223 -2.197 C19 76J 12 76J C21 C12 C 0 1 N N S 13.446 16.483 65.459 0.816 0.524 -2.837 C21 76J 13 76J C24 C13 C 0 1 Y N N 15.620 18.908 67.150 2.672 -0.915 0.927 C24 76J 14 76J C26 C14 C 0 1 Y N N 14.857 20.902 67.289 4.704 -0.336 1.413 C26 76J 15 76J C27 C15 C 0 1 Y N N 14.606 22.286 67.306 6.016 -0.171 1.890 C27 76J 16 76J C4 C16 C 0 1 N N N 19.242 12.773 64.431 -4.236 3.137 0.236 C4 76J 17 76J N6 N1 N 1 1 N N N 17.831 13.898 66.113 -2.869 1.365 -0.758 N6 76J 18 76J C9 C17 C 0 1 N N N 16.634 14.008 69.277 -2.723 -2.375 -0.152 C9 76J 19 76J N11 N2 N 1 1 N N N 15.458 15.740 70.531 -4.684 -3.071 1.141 N11 76J 20 76J O13 O2 O 0 1 N N N 15.349 12.179 70.907 -3.146 -5.226 1.353 O13 76J 21 76J O14 O3 O 0 1 N N N 14.463 13.763 72.152 -2.728 -5.482 -0.802 O14 76J 22 76J C18 C18 C 0 1 N N R 13.541 17.534 67.606 2.032 0.830 -0.780 C18 76J 23 76J O20 O4 O 0 1 N N N 11.450 16.525 66.863 3.243 0.876 -2.915 O20 76J 24 76J O22 O5 O 0 1 N N N 12.711 15.689 64.560 0.885 1.702 -3.642 O22 76J 25 76J N23 N3 N 0 1 Y N N 14.288 18.797 67.463 2.945 0.183 0.166 N23 76J 26 76J N25 N4 N 0 1 Y N N 15.998 20.160 67.042 3.705 -1.218 1.657 N25 76J 27 76J N28 N5 N 0 1 N N N 15.557 23.183 67.056 6.537 -1.032 2.839 N28 76J 28 76J N29 N6 N 0 1 Y N N 13.338 22.728 67.551 6.743 0.831 1.408 N29 76J 29 76J C30 C19 C 0 1 Y N N 12.382 21.793 67.772 6.254 1.658 0.502 C30 76J 30 76J N31 N7 N 0 1 Y N N 12.519 20.469 67.758 5.029 1.546 0.031 N31 76J 31 76J C32 C20 C 0 1 Y N N 13.791 20.077 67.511 4.230 0.570 0.449 C32 76J 32 76J H44 H1 H 0 1 N N N 22.938 11.901 63.383 -6.884 6.301 2.369 H44 76J 33 76J H46 H2 H 0 1 N N N 21.451 11.452 64.286 -7.339 4.591 2.556 H46 76J 34 76J H45 H3 H 0 1 N N N 21.367 11.775 62.521 -5.904 5.226 3.395 H45 76J 35 76J H48 H4 H 0 1 N N N 22.087 13.798 64.685 -6.235 4.985 0.370 H48 76J 36 76J H47 H5 H 0 1 N N N 22.002 14.121 62.920 -4.800 5.620 1.210 H47 76J 37 76J H50 H6 H 0 1 N N N 20.014 14.751 64.556 -4.503 3.439 2.352 H50 76J 38 76J H49 H7 H 0 1 N N N 19.718 14.157 62.887 -5.939 2.804 1.513 H49 76J 39 76J H53 H8 H 0 1 N N N 17.443 13.870 64.030 -3.103 1.652 1.310 H53 76J 40 76J H54 H9 H 0 1 N N N 17.197 12.302 64.872 -4.538 1.017 0.470 H54 76J 41 76J H35 H10 H 0 1 N N N 15.957 13.283 66.944 -1.720 0.048 0.407 H35 76J 42 76J H55 H11 H 0 1 N N N 17.943 15.124 68.039 -4.096 -0.760 0.232 H55 76J 43 76J H56 H12 H 0 1 N N N 16.282 15.792 68.188 -3.816 -1.092 -1.494 H56 76J 44 76J H36 H13 H 0 1 N N N 14.527 14.325 69.259 -4.429 -3.450 -0.910 H36 76J 45 76J H59 H14 H 0 1 N N N 15.380 14.510 64.920 -0.888 -1.263 -1.568 H59 76J 46 76J H60 H15 H 0 1 N N N 16.203 15.983 65.537 -1.793 -0.164 -2.636 H60 76J 47 76J H40 H16 H 0 1 N N N 13.669 14.722 66.682 -0.508 1.766 -1.647 H40 76J 48 76J H42 H17 H 0 1 N N N 12.264 18.237 65.976 2.371 -0.851 -2.142 H42 76J 49 76J H43 H18 H 0 1 N N N 14.117 17.172 64.925 0.478 -0.326 -3.430 H43 76J 50 76J H63 H19 H 0 1 N N N 16.279 18.064 67.009 1.735 -1.452 0.926 H63 76J 51 76J H51 H20 H 0 1 N N N 19.173 11.983 63.668 -4.835 3.198 -0.672 H51 76J 52 76J H52 H21 H 0 1 N N N 19.732 12.372 65.331 -3.399 3.833 0.167 H52 76J 53 76J H34 H22 H 0 1 N N N 18.331 13.324 66.761 -3.443 1.336 -1.588 H34 76J 54 76J H33 H23 H 0 1 N N N 18.318 14.762 65.988 -2.146 2.058 -0.874 H33 76J 55 76J H57 H24 H 0 1 N N N 16.586 12.957 68.955 -2.037 -2.682 -0.942 H57 76J 56 76J H58 H25 H 0 1 N N N 17.472 14.139 69.977 -2.178 -2.284 0.788 H58 76J 57 76J H38 H26 H 0 1 N N N 14.611 15.980 71.005 -5.412 -3.762 1.240 H38 76J 58 76J H39 H27 H 0 1 N N N 16.224 15.788 71.172 -4.127 -3.046 1.982 H39 76J 59 76J H37 H28 H 0 1 N N N 15.612 16.381 69.779 -5.098 -2.164 0.984 H37 76J 60 76J H1 H29 H 0 1 N N N 14.325 13.035 72.746 -2.340 -6.345 -0.603 H1 76J 61 76J H41 H30 H 0 1 N N N 12.975 17.536 68.549 2.202 1.907 -0.802 H41 76J 62 76J H61 H31 H 0 1 N N N 10.926 17.045 67.461 3.382 0.531 -3.807 H61 76J 63 76J H62 H32 H 0 1 N N N 12.206 16.249 63.982 1.461 1.617 -4.415 H62 76J 64 76J H64 H33 H 0 1 N N N 15.166 24.103 67.089 5.997 -1.760 3.183 H64 76J 65 76J H65 H34 H 0 1 N N N 16.279 23.103 67.743 7.444 -0.908 3.160 H65 76J 66 76J H66 H35 H 0 1 N N N 11.391 22.167 67.985 6.879 2.460 0.138 H66 76J 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 76J C1 C2 SING N N 1 76J C2 C3 SING N N 2 76J C3 C4 SING N N 3 76J C4 C5 SING N N 4 76J O22 C21 SING N N 5 76J C5 N6 SING N N 6 76J C21 C16 SING N N 7 76J C21 C19 SING N N 8 76J C15 C16 SING N N 9 76J C15 C7 SING N N 10 76J N6 C7 SING N N 11 76J C16 O17 SING N N 12 76J C19 O20 SING N N 13 76J C19 C18 SING N N 14 76J C7 C8 SING N N 15 76J N25 C24 DOUB Y N 16 76J N25 C26 SING Y N 17 76J N28 C27 SING N N 18 76J C24 N23 SING Y N 19 76J C26 C27 DOUB Y N 20 76J C26 C32 SING Y N 21 76J C27 N29 SING Y N 22 76J N23 C32 SING Y N 23 76J N23 C18 SING N N 24 76J C32 N31 DOUB Y N 25 76J N29 C30 DOUB Y N 26 76J O17 C18 SING N N 27 76J N31 C30 SING Y N 28 76J C8 C9 SING N N 29 76J C9 C10 SING N N 30 76J C10 N11 SING N N 31 76J C10 C12 SING N N 32 76J O13 C12 DOUB N N 33 76J C12 O14 SING N N 34 76J C1 H44 SING N N 35 76J C1 H46 SING N N 36 76J C1 H45 SING N N 37 76J C2 H48 SING N N 38 76J C2 H47 SING N N 39 76J C3 H50 SING N N 40 76J C3 H49 SING N N 41 76J C5 H53 SING N N 42 76J C5 H54 SING N N 43 76J C7 H35 SING N N 44 76J C8 H55 SING N N 45 76J C8 H56 SING N N 46 76J C10 H36 SING N N 47 76J C15 H59 SING N N 48 76J C15 H60 SING N N 49 76J C16 H40 SING N N 50 76J C19 H42 SING N N 51 76J C21 H43 SING N N 52 76J C24 H63 SING N N 53 76J C4 H51 SING N N 54 76J C4 H52 SING N N 55 76J N6 H34 SING N N 56 76J N6 H33 SING N N 57 76J C9 H57 SING N N 58 76J C9 H58 SING N N 59 76J N11 H38 SING N N 60 76J N11 H39 SING N N 61 76J N11 H37 SING N N 62 76J O14 H1 SING N N 63 76J C18 H41 SING N N 64 76J O20 H61 SING N N 65 76J O22 H62 SING N N 66 76J N28 H64 SING N N 67 76J N28 H65 SING N N 68 76J C30 H66 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 76J InChI InChI 1.03 "InChI=1S/C20H33N7O5/c1-2-3-4-7-23-11(5-6-12(21)20(30)31)8-13-15(28)16(29)19(32-13)27-10-26-14-17(22)24-9-25-18(14)27/h9-13,15-16,19,23,28-29H,2-8,21H2,1H3,(H,30,31)(H2,22,24,25)/p+2/t11-,12-,13+,15+,16+,19+/m0/s1" 76J InChIKey InChI 1.03 RFJREUSTWBSNNC-OAVPVUAOSA-P 76J SMILES_CANONICAL CACTVS 3.385 "CCCCC[NH2+][C@@H](CC[C@H]([NH3+])C(O)=O)C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23" 76J SMILES CACTVS 3.385 "CCCCC[NH2+][CH](CC[CH]([NH3+])C(O)=O)C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23" 76J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "CCCCC[NH2+][C@@H](CC[C@@H](C(=O)O)[NH3+])C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O" 76J SMILES "OpenEye OEToolkits" 2.0.5 "CCCCC[NH2+]C(CCC(C(=O)O)[NH3+])CC1C(C(C(O1)n2cnc3c2ncnc3N)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 76J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 "[(2~{S},5~{S})-1-[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]-5-azaniumyl-6-oxidanyl-6-oxidanylidene-hexan-2-yl]-pentyl-azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 76J "Create component" 2016-09-06 EBI 76J "Initial release" 2016-10-05 RCSB #