data_7AT # _chem_comp.id 7AT _chem_comp.name "1-(5-O-phosphono-beta-D-ribofuranosyl)-3-(1H-1,2,3-triazol-5-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine" _chem_comp.type "RNA LINKING" _chem_comp.pdbx_type ATOMN _chem_comp.formula "C12 H15 N8 O7 P" _chem_comp.mon_nstd_parent_comp_id A _chem_comp.pdbx_synonyms 7-triazolyl-8-aza-7-deazaadenosine _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-11-22 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 414.271 _chem_comp.one_letter_code A _chem_comp.three_letter_code 7AT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4NFQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7AT P P P 0 1 N N N 65.984 28.442 27.306 5.199 -1.379 -0.706 P 7AT 1 7AT N1 N1 N 0 1 Y N N 70.641 21.338 30.075 -4.670 1.771 -1.776 N1 7AT 2 7AT C2 C2 C 0 1 Y N N 71.654 22.223 30.214 -3.692 2.651 -1.904 C2 7AT 3 7AT N3 N3 N 0 1 Y N N 71.493 23.508 29.955 -2.496 2.462 -1.392 N3 7AT 4 7AT C4 C4 C 0 1 Y N N 70.281 23.971 29.586 -2.215 1.352 -0.709 C4 7AT 5 7AT C5 C5 C 0 1 Y N N 69.160 23.076 29.403 -3.226 0.387 -0.547 C5 7AT 6 7AT C6 C6 C 0 1 Y N N 69.396 21.639 29.689 -4.487 0.633 -1.113 C6 7AT 7 7AT N6 N6 N 0 1 N N N 68.435 20.689 29.617 -5.513 -0.283 -0.983 N6 7AT 8 7AT N9 N9 N 0 1 Y N N 69.825 25.177 29.338 -1.107 0.877 -0.074 N9 7AT 9 7AT "C1'" "C1'" C 0 1 N N R 70.605 26.426 29.344 0.183 1.567 0.007 "C1'" 7AT 10 7AT "C2'" "C2'" C 0 1 N N R 71.322 26.496 27.989 0.423 2.091 1.440 "C2'" 7AT 11 7AT "C3'" "C3'" C 0 1 N N S 70.318 27.300 27.211 1.938 1.887 1.666 "C3'" 7AT 12 7AT "O3'" "O3'" O 0 1 N N N 70.899 27.989 26.106 2.582 3.141 1.901 "O3'" 7AT 13 7AT "C4'" "C4'" C 0 1 N N R 69.801 28.295 28.272 2.434 1.263 0.343 "C4'" 7AT 14 7AT "O4'" "O4'" O 0 1 N N N 69.705 27.503 29.492 1.265 0.640 -0.233 "O4'" 7AT 15 7AT "C5'" "C5'" C 0 1 N N N 68.455 28.916 27.947 3.514 0.216 0.620 "C5'" 7AT 16 7AT "O5'" "O5'" O 0 1 N N N 67.467 27.893 27.600 4.041 -0.264 -0.619 "O5'" 7AT 17 7AT OP1 OP1 O 0 1 N N N 65.040 27.332 26.857 4.783 -2.583 0.048 OP1 7AT 18 7AT OP2 OP2 O 0 1 N N N 66.050 29.731 26.452 5.452 -1.772 -2.246 OP2 7AT 19 7AT N8 N8 N 0 1 Y N N 68.454 25.267 28.948 -1.391 -0.372 0.488 N8 7AT 20 7AT C7 C7 C 0 1 Y N N 68.039 23.987 29.061 -2.636 -0.703 0.233 C7 7AT 21 7AT C24 C24 C 0 1 Y N N 66.654 23.535 28.699 -3.317 -1.946 0.655 C24 7AT 22 7AT N28 N28 N 0 1 Y N N 65.752 24.389 28.119 -4.181 -2.706 -0.084 N28 7AT 23 7AT N27 N27 N 0 1 Y N N 64.618 23.568 27.896 -4.549 -3.705 0.639 N27 7AT 24 7AT N26 N26 N 0 1 Y N N 64.950 22.300 28.426 -3.991 -3.656 1.796 N26 7AT 25 7AT C25 C25 C 0 1 Y N N 66.167 22.256 28.901 -3.209 -2.576 1.863 C25 7AT 26 7AT "O2'" "O2'" O 0 1 N N N 72.564 27.210 28.041 0.086 3.477 1.529 "O2'" 7AT 27 7AT H1 H1 H 0 1 N N N 72.619 21.870 30.545 -3.884 3.562 -2.451 H1 7AT 28 7AT H2 H2 H 0 1 N N N 68.818 19.806 29.887 -5.411 -1.045 -0.391 H2 7AT 29 7AT H3 H3 H 0 1 N N N 67.683 20.928 30.232 -6.335 -0.165 -1.484 H3 7AT 30 7AT H4 H4 H 0 1 N N N 71.349 26.411 30.154 0.220 2.387 -0.710 H4 7AT 31 7AT H5 H5 H 0 1 N N N 71.440 25.490 27.561 -0.154 1.512 2.161 H5 7AT 32 7AT H6 H6 H 0 1 N N N 69.491 26.653 26.883 2.111 1.205 2.499 H6 7AT 33 7AT H7 H7 H 0 1 N Y N 70.226 28.480 25.649 2.265 3.605 2.688 H7 7AT 34 7AT H8 H8 H 0 1 N N N 70.545 29.095 28.401 2.817 2.038 -0.322 H8 7AT 35 7AT H9 H9 H 0 1 N N N 68.573 29.603 27.096 4.315 0.666 1.205 H9 7AT 36 7AT H10 H10 H 0 1 N N N 68.098 29.476 28.824 3.080 -0.615 1.176 H10 7AT 37 7AT H12 H12 H 0 1 N N N 65.456 29.654 25.715 6.139 -2.440 -2.374 H12 7AT 38 7AT H13 H13 H 0 1 N N N 65.867 25.359 27.905 -4.466 -2.524 -0.993 H13 7AT 39 7AT H14 H14 H 0 1 N N N 66.675 21.415 29.348 -2.607 -2.265 2.704 H14 7AT 40 7AT H15 H15 H 0 1 N N N 73.200 26.704 28.532 0.217 3.858 2.408 H15 7AT 41 7AT OP3 OP3 O 0 1 N Y N ? ? ? 6.558 -0.792 -0.072 OP3 7AT 42 7AT HOP3 HOP3 H 0 0 N Y N ? ? ? 6.890 -0.001 -0.517 HOP3 7AT 43 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7AT "O3'" "C3'" SING N N 1 7AT OP2 P SING N N 2 7AT OP1 P DOUB N N 3 7AT "C3'" "C2'" SING N N 4 7AT "C3'" "C4'" SING N N 5 7AT P "O5'" SING N N 6 7AT "O5'" "C5'" SING N N 7 7AT N27 N28 SING Y N 8 7AT N27 N26 DOUB Y N 9 7AT "C5'" "C4'" SING N N 10 7AT "C2'" "O2'" SING N N 11 7AT "C2'" "C1'" SING N N 12 7AT N28 C24 SING Y N 13 7AT "C4'" "O4'" SING N N 14 7AT N26 C25 SING Y N 15 7AT C24 C25 DOUB Y N 16 7AT C24 C7 SING N N 17 7AT N8 C7 DOUB Y N 18 7AT N8 N9 SING Y N 19 7AT C7 C5 SING Y N 20 7AT N9 "C1'" SING N N 21 7AT N9 C4 SING Y N 22 7AT "C1'" "O4'" SING N N 23 7AT C5 C4 DOUB Y N 24 7AT C5 C6 SING Y N 25 7AT C4 N3 SING Y N 26 7AT N6 C6 SING N N 27 7AT C6 N1 DOUB Y N 28 7AT N3 C2 DOUB Y N 29 7AT N1 C2 SING Y N 30 7AT C2 H1 SING N N 31 7AT N6 H2 SING N N 32 7AT N6 H3 SING N N 33 7AT "C1'" H4 SING N N 34 7AT "C2'" H5 SING N N 35 7AT "C3'" H6 SING N N 36 7AT "O3'" H7 SING N N 37 7AT "C4'" H8 SING N N 38 7AT "C5'" H9 SING N N 39 7AT "C5'" H10 SING N N 40 7AT OP2 H12 SING N N 41 7AT N28 H13 SING N N 42 7AT C25 H14 SING N N 43 7AT "O2'" H15 SING N N 44 7AT P OP3 SING N N 45 7AT OP3 HOP3 SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7AT SMILES ACDLabs 12.01 "O=P(O)(O)OCC4OC(n2nc(c1c(ncnc12)N)c3cnnn3)C(O)C4O" 7AT InChI InChI 1.03 "InChI=1S/C12H15N8O7P/c13-10-6-7(4-1-16-19-17-4)18-20(11(6)15-3-14-10)12-9(22)8(21)5(27-12)2-26-28(23,24)25/h1,3,5,8-9,12,21-22H,2H2,(H2,13,14,15)(H,16,17,19)(H2,23,24,25)/t5-,8-,9-,12-/m1/s1" 7AT InChIKey InChI 1.03 WVKQOUHVRYIFOL-JJNLEZRASA-N 7AT SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(nc(c3[nH]nnc3)c12)[C@@H]4O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]4O" 7AT SMILES CACTVS 3.385 "Nc1ncnc2n(nc(c3[nH]nnc3)c12)[CH]4O[CH](CO[P](O)(O)=O)[CH](O)[CH]4O" 7AT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1c([nH]nn1)c2c3c(ncnc3n(n2)[C@H]4[C@@H]([C@@H]([C@H](O4)COP(=O)(O)O)O)O)N" 7AT SMILES "OpenEye OEToolkits" 1.7.6 "c1c([nH]nn1)c2c3c(ncnc3n(n2)C4C(C(C(O4)COP(=O)(O)O)O)O)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7AT "SYSTEMATIC NAME" ACDLabs 12.01 "1-(5-O-phosphono-beta-D-ribofuranosyl)-3-(1H-1,2,3-triazol-5-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine" 7AT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R,5R)-5-[4-azanyl-3-(1H-1,2,3-triazol-5-yl)pyrazolo[3,4-d]pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7AT "Create component" 2013-11-22 RCSB 7AT "Initial release" 2014-07-02 RCSB 7AT "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 7AT _pdbx_chem_comp_synonyms.name 7-triazolyl-8-aza-7-deazaadenosine _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##