data_89W # _chem_comp.id 89W _chem_comp.name "N-[(3R)-piperidin-3-yl]benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H16 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-09-14 _chem_comp.pdbx_modified_date 2021-09-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 204.268 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 89W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SBK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 89W C10 C1 C 0 1 Y N N 0.498 4.012 -8.396 -2.030 -0.152 0.095 C10 89W 1 89W C13 C2 C 0 1 Y N N -0.915 4.045 -6.069 -4.679 0.556 -0.296 C13 89W 2 89W C15 C3 C 0 1 Y N N -0.042 2.833 -7.895 -3.042 -1.097 0.275 C15 89W 3 89W O01 O1 O 0 1 N N N 2.292 4.566 -9.851 -0.332 -1.668 0.621 O01 89W 4 89W C02 C4 C 0 1 N N N 1.282 3.963 -9.690 -0.616 -0.531 0.297 C02 89W 5 89W N03 N1 N 0 1 N N N 0.737 3.125 -10.710 0.359 0.383 0.123 N03 89W 6 89W C04 C5 C 0 1 N N R 1.473 2.993 -11.925 1.760 0.007 0.323 C04 89W 7 89W C05 C6 C 0 1 N N N 0.864 3.817 -13.011 2.578 1.252 0.680 C05 89W 8 89W C06 C7 C 0 1 N N N 1.417 3.478 -14.346 4.050 0.860 0.829 C06 89W 9 89W C07 C8 C 0 1 N N N 1.317 1.977 -14.658 4.537 0.220 -0.473 C07 89W 10 89W N08 N2 N 0 1 N N N 1.727 1.081 -13.535 3.724 -0.966 -0.771 N08 89W 11 89W C09 C9 C 0 1 N N N 1.383 1.489 -12.154 2.313 -0.609 -0.964 C09 89W 12 89W C11 C10 C 0 1 Y N N 0.347 5.229 -7.762 -2.359 1.151 -0.282 C11 89W 13 89W C12 C11 C 0 1 Y N N -0.386 5.225 -6.590 -3.681 1.497 -0.475 C12 89W 14 89W C14 C12 C 0 1 Y N N -0.765 2.827 -6.705 -4.359 -0.737 0.079 C14 89W 15 89W H1 H1 H 0 1 N N N -1.460 4.084 -5.137 -5.712 0.832 -0.448 H1 89W 16 89W H2 H2 H 0 1 N N N 0.101 1.909 -8.436 -2.794 -2.106 0.566 H2 89W 17 89W H3 H3 H 0 1 N N N -0.131 2.647 -10.577 0.132 1.290 -0.136 H3 89W 18 89W H4 H4 H 0 1 N N N 2.525 3.281 -11.780 1.830 -0.719 1.133 H4 89W 19 89W H5 H5 H 0 1 N N N 1.062 4.879 -12.804 2.476 1.994 -0.112 H5 89W 20 89W H6 H6 H 0 1 N N N -0.222 3.642 -13.022 2.214 1.669 1.619 H6 89W 21 89W H7 H7 H 0 1 N N N 2.476 3.775 -14.376 4.644 1.750 1.041 H7 89W 22 89W H8 H8 H 0 1 N N N 0.858 4.036 -15.112 4.157 0.148 1.647 H8 89W 23 89W H9 H9 H 0 1 N N N 0.272 1.749 -14.915 4.443 0.938 -1.288 H9 89W 24 89W H10 H10 H 0 1 N N N 1.963 1.762 -15.522 5.582 -0.073 -0.366 H10 89W 25 89W H11 H11 H 0 1 N N N 1.302 0.190 -13.696 4.086 -1.460 -1.573 H11 89W 26 89W H13 H13 H 0 1 N N N 0.353 1.165 -11.941 1.743 -1.504 -1.213 H13 89W 27 89W H14 H14 H 0 1 N N N 2.075 0.989 -11.460 2.229 0.113 -1.776 H14 89W 28 89W H15 H15 H 0 1 N N N 0.778 6.135 -8.160 -1.581 1.887 -0.423 H15 89W 29 89W H16 H16 H 0 1 N N N -0.552 6.155 -6.067 -3.937 2.505 -0.767 H16 89W 30 89W H17 H17 H 0 1 N N N -1.186 1.919 -6.300 -5.143 -1.467 0.218 H17 89W 31 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 89W C07 C06 SING N N 1 89W C07 N08 SING N N 2 89W C06 C05 SING N N 3 89W N08 C09 SING N N 4 89W C05 C04 SING N N 5 89W C09 C04 SING N N 6 89W C04 N03 SING N N 7 89W N03 C02 SING N N 8 89W O01 C02 DOUB N N 9 89W C02 C10 SING N N 10 89W C10 C15 DOUB Y N 11 89W C10 C11 SING Y N 12 89W C15 C14 SING Y N 13 89W C11 C12 DOUB Y N 14 89W C14 C13 DOUB Y N 15 89W C12 C13 SING Y N 16 89W C13 H1 SING N N 17 89W C15 H2 SING N N 18 89W N03 H3 SING N N 19 89W C04 H4 SING N N 20 89W C05 H5 SING N N 21 89W C05 H6 SING N N 22 89W C06 H7 SING N N 23 89W C06 H8 SING N N 24 89W C07 H9 SING N N 25 89W C07 H10 SING N N 26 89W N08 H11 SING N N 27 89W C09 H13 SING N N 28 89W C09 H14 SING N N 29 89W C11 H15 SING N N 30 89W C12 H16 SING N N 31 89W C14 H17 SING N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 89W SMILES ACDLabs 12.01 "O=C(NC1CCCNC1)c1ccccc1" 89W InChI InChI 1.03 "InChI=1S/C12H16N2O/c15-12(10-5-2-1-3-6-10)14-11-7-4-8-13-9-11/h1-3,5-6,11,13H,4,7-9H2,(H,14,15)/t11-/m1/s1" 89W InChIKey InChI 1.03 ZFLKDMGBVZHBAC-LLVKDONJSA-N 89W SMILES_CANONICAL CACTVS 3.385 "O=C(N[C@@H]1CCCNC1)c2ccccc2" 89W SMILES CACTVS 3.385 "O=C(N[CH]1CCCNC1)c2ccccc2" 89W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(=O)N[C@@H]2CCCNC2" 89W SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(=O)NC2CCCNC2" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 89W "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(3R)-piperidin-3-yl]benzamide" 89W "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(3~{R})-piperidin-3-yl]benzamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 89W "Create component" 2021-09-14 RCSB 89W "Initial release" 2021-09-22 RCSB ##