data_8O7 # _chem_comp.id 8O7 _chem_comp.name ;N-(2-aminoethyl)-4'-(((4-oxo-4,5,6,7-tetrahydro-3H-cyclopenta[d]pyrimidin-2-yl)thio)methyl)-[1,1'-biphenyl]-4-sulfonami de ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H24 N4 O3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;N-(2-aminoethyl)-4'-{[(4-oxo-4,5,6,7-tetrahydro-3H-cyclopenta[d]pyrimidin-2-yl)sulfanyl]methyl}[1,1'-biphenyl]-4-sulfon amide ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-02-22 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 456.581 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8O7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5UWN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8O7 C1 C1 C 0 1 N N N -1.699 -7.635 28.145 -8.248 -2.887 -0.207 C1 8O7 1 8O7 N1 N1 N 0 1 N N N -2.424 -7.696 29.459 -8.008 -4.060 0.645 N1 8O7 2 8O7 C2 C2 C 0 1 N N N -1.383 -9.029 27.586 -7.369 -1.726 0.264 C2 8O7 3 8O7 N3 N2 N 0 1 N N N -0.721 -8.931 26.268 -7.609 -0.557 -0.585 N3 8O7 4 8O7 S4 S1 S 0 1 N N N -0.162 -10.374 25.767 -7.090 0.939 -0.099 S4 8O7 5 8O7 O5 O1 O 0 1 N N N -0.133 -10.363 24.352 -7.438 1.842 -1.140 O5 8O7 6 8O7 O6 O2 O 0 1 N N N -1.051 -11.434 26.124 -7.524 1.098 1.244 O6 8O7 7 8O7 C7 C3 C 0 1 Y N N 1.345 -10.646 26.272 -5.329 0.890 -0.051 C7 8O7 8 8O7 C8 C4 C 0 1 Y N N 2.360 -9.792 25.875 -4.682 0.508 1.111 C8 8O7 9 8O7 C9 C5 C 0 1 Y N N 3.669 -9.994 26.297 -3.304 0.468 1.154 C9 8O7 10 8O7 C10 C6 C 0 1 Y N N 4.013 -11.040 27.132 -2.563 0.812 0.025 C10 8O7 11 8O7 C11 C7 C 0 1 Y N N 3.007 -11.910 27.528 -3.220 1.196 -1.142 C11 8O7 12 8O7 C12 C8 C 0 1 Y N N 1.688 -11.708 27.105 -4.599 1.228 -1.176 C12 8O7 13 8O7 C13 C9 C 0 1 Y N N 5.451 -11.205 27.527 -1.080 0.771 0.067 C13 8O7 14 8O7 C14 C10 C 0 1 Y N N 6.299 -10.102 27.514 -0.424 0.382 1.232 C14 8O7 15 8O7 C15 C11 C 0 1 Y N N 7.644 -10.236 27.863 0.956 0.345 1.265 C15 8O7 16 8O7 C16 C12 C 0 1 Y N N 8.194 -11.465 28.218 1.686 0.693 0.143 C16 8O7 17 8O7 C17 C13 C 0 1 Y N N 7.346 -12.570 28.234 1.039 1.080 -1.017 C17 8O7 18 8O7 C18 C14 C 0 1 Y N N 5.991 -12.445 27.891 -0.340 1.115 -1.062 C18 8O7 19 8O7 C19 C15 C 0 1 N N N 9.673 -11.602 28.589 3.192 0.651 0.184 C19 8O7 20 8O7 S20 S2 S 0 1 N N N 10.850 -10.955 27.396 3.764 -0.989 -0.323 S20 8O7 21 8O7 C21 C16 C 0 1 N N N 12.483 -11.285 27.813 5.506 -0.762 -0.186 C21 8O7 22 8O7 N22 N3 N 0 1 N N N 12.966 -10.928 29.042 5.978 0.404 0.207 N22 8O7 23 8O7 C23 C17 C 0 1 N N N 14.247 -11.209 29.375 7.288 0.623 0.326 C23 8O7 24 8O7 C24 C18 C 0 1 N N N 15.118 -11.878 28.437 8.171 -0.376 0.036 C24 8O7 25 8O7 C25 C19 C 0 1 N N N 14.560 -12.237 27.124 7.676 -1.624 -0.384 C25 8O7 26 8O7 N26 N4 N 0 1 N N N 13.270 -11.911 26.900 6.341 -1.796 -0.483 N26 8O7 27 8O7 O27 O3 O 0 1 N N N 15.256 -12.819 26.261 8.441 -2.537 -0.650 O27 8O7 28 8O7 C28 C20 C 0 1 N N N 16.494 -12.093 28.986 9.589 0.105 0.243 C28 8O7 29 8O7 C29 C21 C 0 1 N N N 16.343 -11.603 30.437 9.490 1.645 0.277 C29 8O7 30 8O7 C30 C22 C 0 1 N N N 14.981 -10.921 30.656 8.039 1.866 0.754 C30 8O7 31 8O7 H1 H1 H 0 1 N N N -0.755 -7.089 28.288 -8.003 -3.132 -1.240 H1 8O7 32 8O7 H2 H2 H 0 1 N N N -2.327 -7.098 27.419 -9.297 -2.599 -0.140 H2 8O7 33 8O7 H3 H3 H 0 1 N N N -2.607 -6.768 29.782 -8.577 -4.840 0.354 H3 8O7 34 8O7 H4 H4 H 0 1 N N N -3.288 -8.184 29.340 -7.030 -4.308 0.651 H4 8O7 35 8O7 H6 H6 H 0 1 N N N -2.320 -9.594 27.477 -7.614 -1.481 1.298 H6 8O7 36 8O7 H7 H7 H 0 1 N N N -0.717 -9.555 28.286 -6.320 -2.015 0.198 H7 8O7 37 8O7 H8 H8 H 0 1 N N N 0.046 -8.293 26.337 -8.071 -0.659 -1.432 H8 8O7 38 8O7 H9 H9 H 0 1 N N N 2.132 -8.957 25.229 -5.258 0.242 1.985 H9 8O7 39 8O7 H10 H10 H 0 1 N N N 4.439 -9.314 25.963 -2.800 0.170 2.062 H10 8O7 40 8O7 H11 H11 H 0 1 N N N 3.243 -12.748 28.167 -2.651 1.464 -2.020 H11 8O7 41 8O7 H12 H12 H 0 1 N N N 0.919 -12.392 27.432 -5.109 1.521 -2.082 H12 8O7 42 8O7 H13 H13 H 0 1 N N N 5.913 -9.134 27.231 -0.993 0.110 2.109 H13 8O7 43 8O7 H14 H14 H 0 1 N N N 8.277 -9.361 27.858 1.466 0.044 2.168 H14 8O7 44 8O7 H15 H15 H 0 1 N N N 7.737 -13.537 28.514 1.614 1.352 -1.890 H15 8O7 45 8O7 H16 H16 H 0 1 N N N 5.355 -13.318 27.908 -0.844 1.413 -1.970 H16 8O7 46 8O7 H17 H17 H 0 1 N N N 9.887 -12.672 28.726 3.595 1.403 -0.494 H17 8O7 47 8O7 H18 H18 H 0 1 N N N 9.832 -11.071 29.539 3.533 0.857 1.199 H18 8O7 48 8O7 H19 H19 H 0 1 N N N 16.776 -13.156 28.951 9.982 -0.270 1.188 H19 8O7 49 8O7 H20 H20 H 0 1 N N N 16.427 -12.464 31.117 10.201 2.065 0.989 H20 8O7 50 8O7 H21 H21 H 0 1 N N N 15.101 -9.838 30.808 7.613 2.749 0.276 H21 8O7 51 8O7 H5 H5 H 0 1 N N N 12.871 -12.143 26.013 5.979 -2.648 -0.770 H5 8O7 52 8O7 H22 H22 H 0 1 N N N 17.240 -11.497 28.439 10.222 -0.216 -0.585 H22 8O7 53 8O7 H23 H23 H 0 1 N N N 17.144 -10.883 30.657 9.640 2.066 -0.717 H23 8O7 54 8O7 H24 H24 H 0 1 N N N 14.455 -11.356 31.519 8.009 1.972 1.839 H24 8O7 55 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8O7 O5 S4 DOUB N N 1 8O7 S4 O6 DOUB N N 2 8O7 S4 N3 SING N N 3 8O7 S4 C7 SING N N 4 8O7 C8 C7 DOUB Y N 5 8O7 C8 C9 SING Y N 6 8O7 O27 C25 DOUB N N 7 8O7 N3 C2 SING N N 8 8O7 C7 C12 SING Y N 9 8O7 C9 C10 DOUB Y N 10 8O7 N26 C25 SING N N 11 8O7 N26 C21 SING N N 12 8O7 C12 C11 DOUB Y N 13 8O7 C25 C24 SING N N 14 8O7 C10 C13 SING N N 15 8O7 C10 C11 SING Y N 16 8O7 S20 C21 SING N N 17 8O7 S20 C19 SING N N 18 8O7 C14 C13 DOUB Y N 19 8O7 C14 C15 SING Y N 20 8O7 C13 C18 SING Y N 21 8O7 C2 C1 SING N N 22 8O7 C21 N22 DOUB N N 23 8O7 C15 C16 DOUB Y N 24 8O7 C18 C17 DOUB Y N 25 8O7 C1 N1 SING N N 26 8O7 C16 C17 SING Y N 27 8O7 C16 C19 SING N N 28 8O7 C24 C28 SING N N 29 8O7 C24 C23 DOUB N N 30 8O7 C28 C29 SING N N 31 8O7 N22 C23 SING N N 32 8O7 C23 C30 SING N N 33 8O7 C29 C30 SING N N 34 8O7 C1 H1 SING N N 35 8O7 C1 H2 SING N N 36 8O7 N1 H3 SING N N 37 8O7 N1 H4 SING N N 38 8O7 C2 H6 SING N N 39 8O7 C2 H7 SING N N 40 8O7 N3 H8 SING N N 41 8O7 C8 H9 SING N N 42 8O7 C9 H10 SING N N 43 8O7 C11 H11 SING N N 44 8O7 C12 H12 SING N N 45 8O7 C14 H13 SING N N 46 8O7 C15 H14 SING N N 47 8O7 C17 H15 SING N N 48 8O7 C18 H16 SING N N 49 8O7 C19 H17 SING N N 50 8O7 C19 H18 SING N N 51 8O7 C28 H19 SING N N 52 8O7 C29 H20 SING N N 53 8O7 C30 H21 SING N N 54 8O7 N26 H5 SING N N 55 8O7 C28 H22 SING N N 56 8O7 C29 H23 SING N N 57 8O7 C30 H24 SING N N 58 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8O7 SMILES ACDLabs 12.01 "C(N)CNS(=O)(c1ccc(cc1)c2ccc(cc2)CSC4=NC=3CCCC=3C(N4)=O)=O" 8O7 InChI InChI 1.03 "InChI=1S/C22H24N4O3S2/c23-12-13-24-31(28,29)18-10-8-17(9-11-18)16-6-4-15(5-7-16)14-30-22-25-20-3-1-2-19(20)21(27)26-22/h4-11,24H,1-3,12-14,23H2,(H,25,26,27)" 8O7 InChIKey InChI 1.03 YDCCHZDGDMSTQT-UHFFFAOYSA-N 8O7 SMILES_CANONICAL CACTVS 3.385 "NCCN[S](=O)(=O)c1ccc(cc1)c2ccc(CSC3=NC4=C(CCC4)C(=O)N3)cc2" 8O7 SMILES CACTVS 3.385 "NCCN[S](=O)(=O)c1ccc(cc1)c2ccc(CSC3=NC4=C(CCC4)C(=O)N3)cc2" 8O7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1CSC2=NC3=C(CCC3)C(=O)N2)c4ccc(cc4)S(=O)(=O)NCCN" 8O7 SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1CSC2=NC3=C(CCC3)C(=O)N2)c4ccc(cc4)S(=O)(=O)NCCN" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8O7 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(2-aminoethyl)-4'-{[(4-oxo-4,5,6,7-tetrahydro-3H-cyclopenta[d]pyrimidin-2-yl)sulfanyl]methyl}[1,1'-biphenyl]-4-sulfonamide" 8O7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-(2-azanylethyl)-4-[4-[(4-oxidanylidene-3,5,6,7-tetrahydrocyclopenta[d]pyrimidin-2-yl)sulfanylmethyl]phenyl]benzenesulfonamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8O7 "Create component" 2017-02-22 RCSB 8O7 "Modify formula" 2017-02-24 RCSB 8O7 "Modify name" 2017-02-24 RCSB 8O7 "Initial release" 2017-07-12 RCSB 8O7 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 8O7 _pdbx_chem_comp_synonyms.name "N-(2-aminoethyl)-4'-{[(4-oxo-4,5,6,7-tetrahydro-3H-cyclopenta[d]pyrimidin-2-yl)sulfanyl]methyl}[1,1'-biphenyl]-4-sulfonamide" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##