data_8VV # _chem_comp.id 8VV _chem_comp.name "(1S)-2-{2-[(R)-(2R)-2-amino-2-carboxyethanesulfinyl]-1H-imidazol-4-yl}-1-carboxy-N,N,N-trimethylethan-1-aminium" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H21 N4 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2017-03-08 _chem_comp.pdbx_modified_date 2024-05-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 333.384 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8VV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5V1X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8VV C1 C1 C 0 1 N N R N N N 0.825 -7.719 50.189 -4.632 0.016 0.401 C1 8VV 1 8VV C2 C2 C 0 1 N N N N N N 0.889 -9.208 49.865 -3.277 0.045 -0.308 C2 8VV 2 8VV C3 C3 C 0 1 N N N N N N 0.377 -7.559 51.613 -5.610 -0.787 -0.417 C3 8VV 3 8VV C9 C4 C 0 1 Y N N N N N 2.589 -10.566 48.279 -0.623 0.933 -0.283 C9 8VV 4 8VV C12 C5 C 0 1 Y N N N N N 2.597 -10.693 46.167 1.280 0.280 -1.062 C12 8VV 5 8VV C13 C6 C 0 1 Y N N N N N 2.837 -11.960 46.709 0.943 1.393 -1.742 C13 8VV 6 8VV C14 C7 C 0 1 N N N N N N 2.514 -10.325 44.705 2.533 -0.534 -1.261 C14 8VV 7 8VV C15 C8 C 0 1 N N S N N N 3.252 -11.325 43.821 3.267 -0.675 0.074 C15 8VV 8 8VV C16 C9 C 0 1 N N N N N N 2.320 -11.739 42.715 4.464 -1.573 -0.104 C16 8VV 9 8VV C20 C10 C 0 1 N N N N N N 4.281 -9.318 42.895 2.542 1.455 0.905 C20 8VV 10 8VV C22 C11 C 0 1 N N N N N N 5.001 -11.453 42.141 4.592 0.493 1.696 C22 8VV 11 8VV O4 O1 O 0 1 N N N N N N -0.756 -7.077 51.829 -5.850 -1.933 -0.118 O4 8VV 12 8VV O5 O2 O 0 1 N N N N N N 1.143 -7.926 52.528 -6.215 -0.230 -1.477 O5 8VV 13 8VV C23 C12 C 0 1 N N N N N N 5.517 -10.753 44.360 4.443 1.319 -0.551 C23 8VV 14 8VV N6 N1 N 0 1 N N N N N N 2.115 -7.036 49.908 -4.478 -0.601 1.725 N6 8VV 15 8VV S7 S1 S 0 1 N N R N N N 2.456 -9.881 49.817 -2.099 1.012 0.676 S7 8VV 16 8VV O8 O3 O 0 1 N N N N N N 2.536 -10.965 50.823 -1.757 0.288 1.850 O8 8VV 17 8VV N10 N2 N 0 1 Y N N N N N 2.825 -11.860 48.062 -0.263 1.809 -1.247 N10 8VV 18 8VV N11 N3 N 0 1 Y N N N N N 2.432 -9.818 47.181 0.306 0.024 -0.176 N11 8VV 19 8VV O17 O4 O 0 1 N N N N N N 2.289 -12.943 42.371 4.302 -2.905 -0.158 O17 8VV 20 8VV O18 O5 O 0 1 N N N N N N 1.594 -10.869 42.187 5.569 -1.095 -0.197 O18 8VV 21 8VV N19 N4 N 1 1 N N N N N N 4.497 -10.714 43.305 3.711 0.648 0.531 N19 8VV 22 8VV H1 H1 H 0 1 N N N N N N 0.056 -7.272 49.542 -5.004 1.034 0.516 H1 8VV 23 8VV H2 H2 H 0 1 N N N N N N 0.424 -9.361 48.880 -2.905 -0.974 -0.423 H2 8VV 24 8VV H3 H3 H 0 1 N N N N N N 0.312 -9.747 50.631 -3.391 0.502 -1.291 H3 8VV 25 8VV H4 H4 H 0 1 N N N N N N 3.004 -12.866 46.145 1.515 1.865 -2.526 H4 8VV 26 8VV H5 H5 H 0 1 N N N N N N 2.960 -9.329 44.564 2.268 -1.522 -1.636 H5 8VV 27 8VV H6 H6 H 0 1 N N N N N N 1.456 -10.299 44.405 3.181 -0.034 -1.981 H6 8VV 28 8VV H7 H7 H 0 1 N N N N N N 3.505 -12.209 44.425 2.594 -1.109 0.814 H7 8VV 29 8VV H8 H8 H 0 1 N N N N N N 3.902 -8.739 43.750 2.859 2.284 1.538 H8 8VV 30 8VV H9 H9 H 0 1 N N N N N N 5.232 -8.885 42.552 2.067 1.846 0.005 H9 8VV 31 8VV H10 H10 H 0 1 N N N N N N 3.547 -9.286 42.076 1.831 0.834 1.450 H10 8VV 32 8VV H11 H11 H 0 1 N N N N N N 5.172 -12.503 42.419 4.123 -0.173 2.420 H11 8VV 33 8VV H12 H12 H 0 1 N N N N N N 4.262 -11.405 41.328 5.545 0.071 1.378 H12 8VV 34 8VV H13 H13 H 0 1 N N N N N N 5.947 -11.004 41.803 4.761 1.467 2.156 H13 8VV 35 8VV H14 H14 H 0 1 N N N N N N 0.726 -7.778 53.369 -6.835 -0.784 -1.971 H14 8VV 36 8VV H15 H15 H 0 1 N N N N N N 5.155 -10.203 45.241 4.892 2.237 -0.171 H15 8VV 37 8VV H16 H16 H 0 1 N N N N N N 5.718 -11.798 44.637 5.227 0.660 -0.923 H16 8VV 38 8VV H17 H17 H 0 1 N N N N N N 6.443 -10.287 43.992 3.755 1.560 -1.361 H17 8VV 39 8VV H18 H18 H 0 1 N N N N N N 2.034 -6.065 50.132 -5.346 -0.574 2.240 H18 8VV 40 8VV H19 H19 H 0 1 N N N N N N 2.838 -7.447 50.464 -4.134 -1.546 1.646 H19 8VV 41 8VV H22 H22 H 0 1 N N N N N N 2.961 -12.585 48.737 -0.766 2.587 -1.535 H22 8VV 42 8VV H24 H24 H 0 1 N N N N N N 1.650 -13.058 41.678 5.100 -3.440 -0.273 H24 8VV 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8VV C22 N19 SING N N 1 8VV O18 C16 DOUB N N 2 8VV O17 C16 SING N N 3 8VV C16 C15 SING N N 4 8VV C20 N19 SING N N 5 8VV N19 C15 SING N N 6 8VV N19 C23 SING N N 7 8VV C15 C14 SING N N 8 8VV C14 C12 SING N N 9 8VV C12 C13 DOUB Y N 10 8VV C12 N11 SING Y N 11 8VV C13 N10 SING Y N 12 8VV N11 C9 DOUB Y N 13 8VV N10 C9 SING Y N 14 8VV C9 S7 SING N N 15 8VV S7 C2 SING N N 16 8VV S7 O8 DOUB N N 17 8VV C2 C1 SING N N 18 8VV N6 C1 SING N N 19 8VV C1 C3 SING N N 20 8VV C3 O4 DOUB N N 21 8VV C3 O5 SING N N 22 8VV C1 H1 SING N N 23 8VV C2 H2 SING N N 24 8VV C2 H3 SING N N 25 8VV C13 H4 SING N N 26 8VV C14 H5 SING N N 27 8VV C14 H6 SING N N 28 8VV C15 H7 SING N N 29 8VV C20 H8 SING N N 30 8VV C20 H9 SING N N 31 8VV C20 H10 SING N N 32 8VV C22 H11 SING N N 33 8VV C22 H12 SING N N 34 8VV C22 H13 SING N N 35 8VV O5 H14 SING N N 36 8VV C23 H15 SING N N 37 8VV C23 H16 SING N N 38 8VV C23 H17 SING N N 39 8VV N6 H18 SING N N 40 8VV N6 H19 SING N N 41 8VV N10 H22 SING N N 42 8VV O17 H24 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8VV SMILES ACDLabs 12.01 "O=S(CC(N)C(=O)O)c1nc(CC(C(=O)O)[N+](C)(C)C)c[NH]1" 8VV InChI InChI 1.06 "InChI=1S/C12H20N4O5S/c1-16(2,3)9(11(19)20)4-7-5-14-12(15-7)22(21)6-8(13)10(17)18/h5,8-9H,4,6,13H2,1-3H3,(H2-,14,15,17,18,19,20)/p+1/t8-,9-,22+/m0/s1" 8VV InChIKey InChI 1.06 CSTNDZVKJNPMIG-YWHIBEFZSA-O 8VV SMILES_CANONICAL CACTVS 3.385 "C[N+](C)(C)[C@@H](Cc1c[nH]c(n1)[S@](=O)C[C@H](N)C(O)=O)C(O)=O" 8VV SMILES CACTVS 3.385 "C[N+](C)(C)[CH](Cc1c[nH]c(n1)[S](=O)C[CH](N)C(O)=O)C(O)=O" 8VV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[N+](C)(C)[C@@H](Cc1c[nH]c(n1)[S@](=O)C[C@@H](C(=O)O)N)C(=O)O" 8VV SMILES "OpenEye OEToolkits" 2.0.7 "C[N+](C)(C)C(Cc1c[nH]c(n1)S(=O)CC(C(=O)O)N)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 8VV "SYSTEMATIC NAME" ACDLabs 12.01 "(1S)-2-{2-[(R)-(2R)-2-amino-2-carboxyethanesulfinyl]-1H-imidazol-4-yl}-1-carboxy-N,N,N-trimethylethan-1-aminium" 8VV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{S})-3-[2-[(~{R})-[(2~{R})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]sulfinyl]-1~{H}-imidazol-4-yl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]-trimethyl-azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8VV "Create component" 2017-03-08 RCSB 8VV "Modify charge" 2017-03-08 RCSB 8VV "Initial release" 2018-03-07 RCSB 8VV "Other modification" 2024-05-08 RCSB #