data_90X # _chem_comp.id 90X _chem_comp.name "(S)-1-(2-(2,4-dichlorophenoxy)acetyl)-N-((S)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)-4-(phenethylamino)butan-2-yl)pyrrolidine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H34 Cl2 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2S)-1-[2-[2,4-bis(chloranyl)phenoxy]ethanoyl]-N-[(2S)-3,4-bis(oxidanylidene)-1-[(3S)-2-oxidanylidenepyrrolidin-3-yl]-4-(2-phenylethylamino)butan-2-yl]pyrrolidine-2-carboxamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-11-10 _chem_comp.pdbx_modified_date 2022-11-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 605.509 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 90X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7Q5F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 90X N1 N1 N 0 1 N N N 20.654 3.965 -27.309 1.672 -0.889 -1.522 N1 90X 1 90X C2 C1 C 0 1 Y N N 18.889 8.616 -29.683 -5.660 0.793 -0.009 C2 90X 2 90X C3 C2 C 0 1 Y N N 20.090 8.548 -28.950 -5.895 2.140 0.222 C3 90X 3 90X C4 C3 C 0 1 Y N N 20.204 9.240 -27.748 -7.135 2.558 0.665 C4 90X 4 90X C5 C4 C 0 1 Y N N 19.131 10.008 -27.285 -8.143 1.634 0.879 C5 90X 5 90X C8 C5 C 0 1 N N N 22.121 5.563 -31.504 -0.987 2.960 -1.153 C8 90X 6 90X C9 C6 C 0 1 N N N 23.166 4.465 -31.255 0.110 3.446 -2.133 C9 90X 7 90X C10 C7 C 0 1 N N N 22.943 3.927 -29.849 1.105 2.256 -2.101 C10 90X 8 90X C11 C8 C 0 1 N N S 21.489 4.297 -29.509 0.176 1.032 -1.961 C11 90X 9 90X C12 C9 C 0 1 N N N 21.332 4.794 -28.121 0.800 0.018 -1.038 C12 90X 10 90X C15 C10 C 0 1 N N S 18.361 5.188 -26.073 1.717 -4.183 0.348 C15 90X 11 90X C7 C11 C 0 1 Y N N 17.853 9.388 -29.214 -6.672 -0.133 0.206 C7 90X 12 90X C16 C12 C 0 1 N N N 18.754 6.615 -25.679 0.747 -5.387 0.382 C16 90X 13 90X N N2 N 0 1 N N N 21.087 5.300 -30.503 -1.093 1.510 -1.394 N 90X 14 90X C C13 C 0 1 N N N 19.898 5.883 -30.409 -2.175 0.748 -1.137 C 90X 15 90X O O1 O 0 1 N N N 19.107 5.585 -29.499 -2.123 -0.453 -1.298 O 90X 16 90X C1 C14 C 0 1 N N N 19.618 6.971 -31.430 -3.449 1.388 -0.650 C1 90X 17 90X C13 C15 C 0 1 N N S 20.623 4.156 -25.885 2.194 -1.943 -0.649 C13 90X 18 90X C14 C16 C 0 1 N N N 19.171 4.142 -25.342 1.219 -3.122 -0.634 C14 90X 19 90X C17 C17 C 0 1 N N N 17.457 7.389 -25.425 -0.172 -5.018 1.567 C17 90X 20 90X C18 C18 C 0 1 N N N 16.884 5.144 -25.701 1.693 -3.648 1.763 C18 90X 21 90X C19 C19 C 0 1 N N R 21.395 2.977 -25.339 3.553 -2.412 -1.172 C19 90X 22 90X C6 C20 C 0 1 Y N N 17.948 10.080 -28.021 -7.911 0.290 0.650 C6 90X 23 90X N2 N3 N 0 1 N N N 16.468 6.345 -25.313 0.628 -4.135 2.424 N2 90X 24 90X O1 O2 O 0 1 N N N 18.694 7.958 -30.895 -4.443 0.380 -0.451 O1 90X 25 90X O2 O3 O 0 1 N N N 16.225 4.128 -25.785 2.515 -2.890 2.233 O2 90X 26 90X O3 O4 O 0 1 N N N 21.237 3.173 -23.071 4.950 -0.838 -2.240 O3 90X 27 90X O4 O5 O 0 1 N N N 22.496 2.642 -26.239 3.403 -2.923 -2.498 O4 90X 28 90X O5 O6 O 0 1 N N N 21.735 5.880 -27.727 0.518 0.017 0.142 O5 90X 29 90X CL CL1 CL 0 0 N N N 19.274 10.906 -25.729 -9.700 2.163 1.436 CL 90X 30 90X CL1 CL2 CL 0 0 N N N 16.351 9.476 -30.196 -6.381 -1.820 -0.081 CL1 90X 31 90X C20 C21 C 0 1 N N N 21.931 3.389 -24.033 4.514 -1.251 -1.187 C20 90X 32 90X C21 C22 C 0 1 N N N 23.982 4.079 -22.861 5.822 0.457 -0.043 C21 90X 33 90X C22 C23 C 0 1 N N N 25.350 3.418 -23.061 6.079 0.924 1.391 C22 90X 34 90X C23 C24 C 0 1 Y N N 25.999 3.841 -24.363 7.040 2.085 1.377 C23 90X 35 90X C24 C25 C 0 1 Y N N 26.015 5.170 -24.769 6.560 3.378 1.287 C24 90X 36 90X C25 C26 C 0 1 Y N N 26.618 5.531 -25.970 7.441 4.443 1.274 C25 90X 37 90X C26 C27 C 0 1 Y N N 27.214 4.568 -26.765 8.802 4.215 1.349 C26 90X 38 90X C27 C28 C 0 1 Y N N 27.211 3.246 -26.365 9.282 2.922 1.439 C27 90X 39 90X C28 C29 C 0 1 Y N N 26.591 2.882 -25.175 8.401 1.857 1.458 C28 90X 40 90X N3 N4 N 0 1 N N N 23.139 3.986 -24.065 4.888 -0.672 -0.029 N3 90X 41 90X H93 H1 H 0 1 N N N 20.157 3.194 -27.707 1.951 -0.845 -2.450 H93 90X 42 90X H31 H2 H 0 1 N N N 20.918 7.962 -29.319 -5.109 2.862 0.055 H31 90X 43 90X H41 H3 H 0 1 N N N 21.118 9.184 -27.175 -7.318 3.607 0.845 H41 90X 44 90X H81 H4 H 0 1 N N N 22.560 6.561 -31.360 -0.688 3.153 -0.123 H81 90X 45 90X H82 H5 H 0 1 N N N 21.709 5.487 -32.521 -1.936 3.451 -1.372 H82 90X 46 90X H92 H6 H 0 1 N N N 23.042 3.656 -31.990 -0.296 3.589 -3.135 H92 90X 47 90X H91 H7 H 0 1 N N N 24.179 4.885 -31.339 0.581 4.360 -1.770 H91 90X 48 90X H13 H8 H 0 1 N N N 23.080 2.836 -29.826 1.675 2.205 -3.029 H13 90X 49 90X H10 H9 H 0 1 N N N 23.638 4.399 -29.139 1.772 2.335 -1.242 H10 90X 50 90X H14 H10 H 0 1 N N N 20.869 3.398 -29.636 0.003 0.585 -2.940 H14 90X 51 90X H18 H11 H 0 1 N N N 18.475 5.059 -27.159 2.721 -4.511 0.081 H18 90X 52 90X H2A H12 H 0 1 N N N 19.368 6.598 -24.766 0.178 -5.456 -0.545 H2A 90X 53 90X H19 H13 H 0 1 N N N 19.322 7.088 -26.494 1.283 -6.315 0.579 H19 90X 54 90X H12 H14 H 0 1 N N N 19.178 6.516 -32.330 -3.260 1.903 0.292 H12 90X 55 90X H11 H15 H 0 1 N N N 20.563 7.468 -31.695 -3.802 2.104 -1.392 H11 90X 56 90X H15 H16 H 0 1 N N N 21.115 5.097 -25.598 2.308 -1.554 0.362 H15 90X 57 90X H16 H17 H 0 1 N N N 19.178 4.367 -24.265 1.155 -3.553 -1.633 H16 90X 58 90X H17 H18 H 0 1 N N N 18.726 3.150 -25.506 0.233 -2.774 -0.325 H17 90X 59 90X H2C H19 H 0 1 N N N 17.522 7.973 -24.495 -1.058 -4.494 1.209 H2C 90X 60 90X H2B H20 H 0 1 N N N 17.228 8.061 -26.265 -0.461 -5.916 2.115 H2B 90X 61 90X H6 H22 H 0 1 N N N 17.117 10.669 -27.663 -8.699 -0.430 0.818 H6 90X 62 90X H94 H23 H 0 1 N N N 15.543 6.512 -24.971 0.417 -3.930 3.348 H94 90X 63 90X H22 H25 H 0 1 N N N 24.134 5.141 -22.616 5.393 1.276 -0.620 H22 90X 64 90X H21 H26 H 0 1 N N N 23.466 3.580 -22.027 6.762 0.145 -0.498 H21 90X 65 90X H23 H27 H 0 1 N N N 25.219 2.326 -23.068 5.139 1.236 1.846 H23 90X 66 90X H24 H28 H 0 1 N N N 26.008 3.704 -22.227 6.508 0.105 1.969 H24 90X 67 90X H25 H29 H 0 1 N N N 25.557 5.927 -24.149 5.496 3.556 1.228 H25 90X 68 90X H26 H30 H 0 1 N N N 26.621 6.565 -26.282 7.066 5.454 1.204 H26 90X 69 90X H27 H31 H 0 1 N N N 27.681 4.850 -27.697 9.491 5.047 1.334 H27 90X 70 90X H28 H32 H 0 1 N N N 27.690 2.495 -26.976 10.346 2.744 1.498 H28 90X 71 90X H29 H33 H 0 1 N N N 26.569 1.844 -24.879 8.776 0.847 1.528 H29 90X 72 90X H32 H34 H 0 1 N N N 23.470 4.374 -24.925 4.540 -1.002 0.814 H32 90X 73 90X H1 H35 H 0 1 N Y N 20.721 2.116 -25.220 3.941 -3.197 -0.522 H1 90X 74 90X H42 H36 H 0 1 N N N 22.977 1.901 -25.890 3.061 -2.277 -3.132 H42 90X 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 90X C8 C9 SING N N 1 90X C8 N SING N N 2 90X C1 O1 SING N N 3 90X C1 C SING N N 4 90X C9 C10 SING N N 5 90X O1 C2 SING N N 6 90X N C SING N N 7 90X N C11 SING N N 8 90X C O DOUB N N 9 90X CL1 C7 SING N N 10 90X C10 C11 SING N N 11 90X C2 C7 DOUB Y N 12 90X C2 C3 SING Y N 13 90X C11 C12 SING N N 14 90X C7 C6 SING Y N 15 90X C3 C4 DOUB Y N 16 90X C12 O5 DOUB N N 17 90X C12 N1 SING N N 18 90X C6 C5 DOUB Y N 19 90X C4 C5 SING Y N 20 90X N1 C13 SING N N 21 90X C5 CL SING N N 22 90X C26 C27 DOUB Y N 23 90X C26 C25 SING Y N 24 90X C27 C28 SING Y N 25 90X O4 C19 SING N N 26 90X C15 C18 SING N N 27 90X C15 C16 SING N N 28 90X C15 C14 SING N N 29 90X C25 C24 DOUB Y N 30 90X C13 C14 SING N N 31 90X C13 C19 SING N N 32 90X O2 C18 DOUB N N 33 90X C18 N2 SING N N 34 90X C16 C17 SING N N 35 90X C17 N2 SING N N 36 90X C19 C20 SING N N 37 90X C28 C23 DOUB Y N 38 90X C24 C23 SING Y N 39 90X C23 C22 SING N N 40 90X N3 C20 SING N N 41 90X N3 C21 SING N N 42 90X C20 O3 DOUB N N 43 90X C22 C21 SING N N 44 90X N1 H93 SING N N 45 90X C3 H31 SING N N 46 90X C4 H41 SING N N 47 90X C8 H81 SING N N 48 90X C8 H82 SING N N 49 90X C9 H92 SING N N 50 90X C9 H91 SING N N 51 90X C10 H13 SING N N 52 90X C10 H10 SING N N 53 90X C11 H14 SING N N 54 90X C15 H18 SING N N 55 90X C16 H2A SING N N 56 90X C16 H19 SING N N 57 90X C1 H12 SING N N 58 90X C1 H11 SING N N 59 90X C13 H15 SING N N 60 90X C14 H16 SING N N 61 90X C14 H17 SING N N 62 90X C17 H2C SING N N 63 90X C17 H2B SING N N 64 90X C6 H6 SING N N 65 90X N2 H94 SING N N 66 90X C21 H22 SING N N 67 90X C21 H21 SING N N 68 90X C22 H23 SING N N 69 90X C22 H24 SING N N 70 90X C24 H25 SING N N 71 90X C25 H26 SING N N 72 90X C26 H27 SING N N 73 90X C27 H28 SING N N 74 90X C28 H29 SING N N 75 90X N3 H32 SING N N 76 90X C19 H1 SING N N 77 90X O4 H42 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 90X InChI InChI 1.06 "InChI=1S/C29H34Cl2N4O6/c30-20-8-9-24(21(31)16-20)41-17-25(36)35-14-4-7-23(35)28(39)34-22(15-19-11-13-32-27(19)38)26(37)29(40)33-12-10-18-5-2-1-3-6-18/h1-3,5-6,8-9,16,19,22-23,26,37H,4,7,10-15,17H2,(H,32,38)(H,33,40)(H,34,39)/t19-,22-,23-,26+/m0/s1" 90X InChIKey InChI 1.06 GYPKOWHKPVSQIO-RZOLNQLPSA-N 90X SMILES_CANONICAL CACTVS 3.385 "O[C@H]([C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2CCCN2C(=O)COc3ccc(Cl)cc3Cl)C(=O)NCCc4ccccc4" 90X SMILES CACTVS 3.385 "O[CH]([CH](C[CH]1CCNC1=O)NC(=O)[CH]2CCCN2C(=O)COc3ccc(Cl)cc3Cl)C(=O)NCCc4ccccc4" 90X SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)CCNC(=O)[C@@H]([C@H](C[C@@H]2CCNC2=O)NC(=O)[C@@H]3CCCN3C(=O)COc4ccc(cc4Cl)Cl)O" 90X SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)CCNC(=O)C(C(CC2CCNC2=O)NC(=O)C3CCCN3C(=O)COc4ccc(cc4Cl)Cl)O" # _pdbx_chem_comp_identifier.comp_id 90X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(2~{S})-1-[2-[2,4-bis(chloranyl)phenoxy]ethanoyl]-~{N}-[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-(2-phenylethylamino)butan-2-yl]pyrrolidine-2-carboxamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 90X _pdbx_chem_comp_synonyms.name "(2S)-1-[2-[2,4-bis(chloranyl)phenoxy]ethanoyl]-N-[(2S)-3,4-bis(oxidanylidene)-1-[(3S)-2-oxidanylidenepyrrolidin-3-yl]-4-(2-phenylethylamino)butan-2-yl]pyrrolidine-2-carboxamide" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 90X "Create component" 2021-11-10 PDBE 90X "Modify descriptor" 2022-08-22 RCSB 90X "Modify coordinates" 2022-11-15 PDBE 90X "Initial release" 2022-11-23 RCSB #