data_98D # _chem_comp.id 98D _chem_comp.name "1-{6-[(1S)-1-hydroxyethyl]pyridin-2-yl}-6-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H30 N8 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-04-09 _chem_comp.pdbx_modified_date 2018-03-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 486.569 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 98D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5VDA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 98D N12 N1 N 0 1 Y N N -5.661 4.491 14.993 -0.844 -0.894 -0.224 N12 98D 1 98D C13 C1 C 0 1 Y N N -4.867 3.391 15.152 -0.022 -1.921 -0.359 C13 98D 2 98D C15 C2 C 0 1 Y N N -4.366 3.594 12.812 1.809 -0.352 -0.242 C15 98D 3 98D C17 C3 C 0 1 Y N N -3.497 3.425 10.640 4.020 0.722 -0.190 C17 98D 4 98D C20 C4 C 0 1 N N S -0.421 3.451 8.489 7.646 1.352 -0.225 C20 98D 5 98D C21 C5 C 0 1 N N N -0.244 1.929 8.404 8.050 0.333 0.842 C21 98D 6 98D C24 C6 C 0 1 Y N N -4.068 4.787 8.719 4.308 3.083 0.058 C24 98D 7 98D C28 C7 C 0 1 N N N -2.994 -0.086 11.444 5.496 -2.557 0.836 C28 98D 8 98D C01 C8 C 0 1 N N N -8.639 11.487 5.599 -10.774 -0.548 -0.284 C01 98D 9 98D N02 N2 N 0 1 N N N -8.290 10.876 6.905 -9.339 -0.263 -0.417 N02 98D 10 98D C03 C9 C 0 1 N N N -6.878 11.035 7.313 -9.011 1.060 0.131 C03 98D 11 98D C04 C10 C 0 1 N N N -6.563 9.998 8.417 -7.526 1.351 -0.099 C04 98D 12 98D N05 N3 N 0 1 N N N -7.642 9.660 9.337 -6.720 0.304 0.543 N05 98D 13 98D C06 C11 C 0 1 Y N N -7.384 8.822 10.428 -5.353 0.575 0.415 C06 98D 14 98D C07 C12 C 0 1 Y N N -6.187 8.075 10.508 -4.418 -0.299 0.957 C07 98D 15 98D C08 C13 C 0 1 Y N N -5.899 7.238 11.586 -3.070 -0.031 0.830 C08 98D 16 98D C09 C14 C 0 1 Y N N -6.806 7.047 12.631 -2.648 1.111 0.163 C09 98D 17 98D N10 N4 N 0 1 N N N -6.597 6.241 13.724 -1.279 1.382 0.035 N10 98D 18 98D C11 C15 C 0 1 Y N N -5.819 5.143 13.811 -0.380 0.344 -0.103 C11 98D 19 98D C14 C16 C 0 1 Y N N -4.209 2.937 14.023 1.350 -1.681 -0.373 C14 98D 20 98D N16 N5 N 0 1 N N N -3.649 2.935 11.893 3.185 -0.388 -0.286 N16 98D 21 98D N18 N6 N 0 1 Y N N -2.231 3.299 10.148 5.333 0.562 -0.244 N18 98D 22 98D C19 C17 C 0 1 Y N N -1.771 3.746 8.969 6.159 1.587 -0.157 C19 98D 23 98D O22 O1 O 0 1 N N N 0.514 4.000 9.416 8.334 2.582 0.006 O22 98D 24 98D C23 C18 C 0 1 Y N N -2.743 4.542 8.232 5.679 2.873 -0.004 C23 98D 25 98D C25 C19 C 0 1 Y N N -4.418 4.268 9.962 3.467 1.990 -0.042 C25 98D 26 98D N26 N7 N 0 1 N N N -3.008 1.952 12.501 3.615 -1.709 -0.442 N26 98D 27 98D C27 C20 C 0 1 N N N -2.151 0.975 11.951 5.013 -2.139 -0.529 C27 98D 28 98D C29 C21 C 0 1 N N N -4.055 -0.616 12.069 6.013 -3.748 1.012 C29 98D 29 98D C30 C22 C 0 1 N N N -3.321 1.904 13.805 2.543 -2.527 -0.499 C30 98D 30 98D O31 O2 O 0 1 N N N -2.923 1.065 14.647 2.562 -3.736 -0.631 O31 98D 31 98D N32 N8 N 0 1 Y N N -5.173 4.668 12.695 0.918 0.619 -0.111 N32 98D 32 98D C33 C23 C 0 1 Y N N -7.999 7.795 12.589 -3.582 1.984 -0.379 C33 98D 33 98D C34 C24 C 0 1 Y N N -8.278 8.633 11.507 -4.931 1.714 -0.258 C34 98D 34 98D C35 C25 C 0 1 N N N -8.983 10.237 9.152 -7.048 -1.020 -0.005 C35 98D 35 98D C36 C26 C 0 1 N N N -9.152 11.289 8.036 -8.533 -1.311 0.224 C36 98D 36 98D H131 H1 H 0 0 N N N -4.759 2.902 16.109 -0.406 -2.926 -0.457 H131 98D 37 98D H201 H2 H 0 0 N N N -0.274 3.886 7.489 7.909 0.969 -1.212 H201 98D 38 98D H213 H3 H 0 0 N N N 0.769 1.697 8.044 7.525 -0.606 0.665 H213 98D 39 98D H212 H4 H 0 0 N N N -0.389 1.487 9.401 9.126 0.162 0.793 H212 98D 40 98D H211 H5 H 0 0 N N N -0.986 1.512 7.707 7.788 0.716 1.828 H211 98D 41 98D H241 H6 H 0 0 N N N -4.776 5.359 8.137 3.908 4.080 0.173 H241 98D 42 98D H281 H7 H 0 0 N N N -2.746 -0.488 10.473 5.417 -1.874 1.669 H281 98D 43 98D H012 H8 H 0 0 N N N -9.705 11.316 5.386 -11.346 0.206 -0.825 H012 98D 44 98D H013 H9 H 0 0 N N N -8.442 12.569 5.636 -10.990 -1.533 -0.697 H013 98D 45 98D H011 H10 H 0 0 N N N -8.029 11.030 4.806 -11.052 -0.527 0.770 H011 98D 46 98D H031 H12 H 0 0 N N N -6.221 10.866 6.447 -9.612 1.820 -0.369 H031 98D 47 98D H032 H13 H 0 0 N N N -6.717 12.051 7.702 -9.223 1.074 1.200 H032 98D 48 98D H041 H14 H 0 0 N N N -6.249 9.069 7.919 -7.320 1.365 -1.169 H041 98D 49 98D H042 H15 H 0 0 N N N -5.729 10.394 9.015 -7.274 2.320 0.332 H042 98D 50 98D H071 H16 H 0 0 N N N -5.469 8.155 9.705 -4.747 -1.186 1.476 H071 98D 51 98D H081 H17 H 0 0 N N N -4.950 6.724 11.613 -2.343 -0.710 1.251 H081 98D 52 98D H101 H18 H 0 0 N N N -7.082 6.501 14.559 -0.964 2.299 0.044 H101 98D 53 98D H221 H19 H 0 0 N N N 0.398 4.942 9.463 8.148 2.981 0.867 H221 98D 54 98D H231 H20 H 0 0 N N N -2.454 4.964 7.281 6.363 3.705 0.071 H231 98D 55 98D H251 H21 H 0 0 N N N -5.375 4.502 10.404 2.395 2.118 0.002 H251 98D 56 98D H271 H22 H 0 0 N N N -1.476 0.584 12.727 5.625 -1.315 -0.895 H271 98D 57 98D H272 H23 H 0 0 N N N -1.557 1.410 11.133 5.092 -2.982 -1.216 H272 98D 58 98D H291 H24 H 0 0 N N N -4.618 -1.409 11.599 6.092 -4.431 0.179 H291 98D 59 98D H292 H25 H 0 0 N N N -4.346 -0.250 13.043 6.359 -4.047 1.990 H292 98D 60 98D H331 H26 H 0 0 N N N -8.706 7.720 13.402 -3.254 2.872 -0.898 H331 98D 61 98D H341 H27 H 0 0 N N N -9.220 9.161 11.494 -5.657 2.390 -0.683 H341 98D 62 98D H351 H28 H 0 0 N N N -9.272 10.712 10.101 -6.836 -1.033 -1.075 H351 98D 63 98D H352 H29 H 0 0 N N N -9.672 9.408 8.932 -6.446 -1.780 0.494 H352 98D 64 98D H361 H30 H 0 0 N N N -8.843 12.279 8.402 -8.739 -1.324 1.294 H361 98D 65 98D H362 H31 H 0 0 N N N -10.203 11.329 7.713 -8.785 -2.279 -0.207 H362 98D 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 98D C01 N02 SING N N 1 98D N02 C03 SING N N 2 98D N02 C36 SING N N 3 98D C03 C04 SING N N 4 98D C36 C35 SING N N 5 98D C23 C24 DOUB Y N 6 98D C23 C19 SING Y N 7 98D C21 C20 SING N N 8 98D C04 N05 SING N N 9 98D C20 C19 SING N N 10 98D C20 O22 SING N N 11 98D C24 C25 SING Y N 12 98D C19 N18 DOUB Y N 13 98D C35 N05 SING N N 14 98D N05 C06 SING N N 15 98D C25 C17 DOUB Y N 16 98D N18 C17 SING Y N 17 98D C06 C07 DOUB Y N 18 98D C06 C34 SING Y N 19 98D C07 C08 SING Y N 20 98D C17 N16 SING N N 21 98D C28 C27 SING N N 22 98D C28 C29 DOUB N N 23 98D C34 C33 DOUB Y N 24 98D C08 C09 DOUB Y N 25 98D N16 N26 SING N N 26 98D N16 C15 SING N N 27 98D C27 N26 SING N N 28 98D N26 C30 SING N N 29 98D C33 C09 SING Y N 30 98D C09 N10 SING N N 31 98D N32 C15 DOUB Y N 32 98D N32 C11 SING Y N 33 98D C15 C14 SING Y N 34 98D N10 C11 SING N N 35 98D C30 C14 SING N N 36 98D C30 O31 DOUB N N 37 98D C11 N12 DOUB Y N 38 98D C14 C13 DOUB Y N 39 98D N12 C13 SING Y N 40 98D C13 H131 SING N N 41 98D C20 H201 SING N N 42 98D C21 H213 SING N N 43 98D C21 H212 SING N N 44 98D C21 H211 SING N N 45 98D C24 H241 SING N N 46 98D C28 H281 SING N N 47 98D C01 H012 SING N N 48 98D C01 H013 SING N N 49 98D C01 H011 SING N N 50 98D C03 H031 SING N N 51 98D C03 H032 SING N N 52 98D C04 H041 SING N N 53 98D C04 H042 SING N N 54 98D C07 H071 SING N N 55 98D C08 H081 SING N N 56 98D N10 H101 SING N N 57 98D O22 H221 SING N N 58 98D C23 H231 SING N N 59 98D C25 H251 SING N N 60 98D C27 H271 SING N N 61 98D C27 H272 SING N N 62 98D C29 H291 SING N N 63 98D C29 H292 SING N N 64 98D C33 H331 SING N N 65 98D C34 H341 SING N N 66 98D C35 H351 SING N N 67 98D C35 H352 SING N N 68 98D C36 H361 SING N N 69 98D C36 H362 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 98D SMILES ACDLabs 12.01 "n3cc2c(N(c1nc(C(O)C)ccc1)N(C2=O)C\C=C)nc3Nc5ccc(N4CCN(C)CC4)cc5" 98D InChI InChI 1.03 "InChI=1S/C26H30N8O2/c1-4-12-33-25(36)21-17-27-26(30-24(21)34(33)23-7-5-6-22(29-23)18(2)35)28-19-8-10-20(11-9-19)32-15-13-31(3)14-16-32/h4-11,17-18,35H,1,12-16H2,2-3H3,(H,27,28,30)/t18-/m0/s1" 98D InChIKey InChI 1.03 FMCQFFXZPOWFBR-SFHVURJKSA-N 98D SMILES_CANONICAL CACTVS 3.385 "C[C@H](O)c1cccc(n1)N2N(CC=C)C(=O)c3cnc(Nc4ccc(cc4)N5CCN(C)CC5)nc23" 98D SMILES CACTVS 3.385 "C[CH](O)c1cccc(n1)N2N(CC=C)C(=O)c3cnc(Nc4ccc(cc4)N5CCN(C)CC5)nc23" 98D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@H](c1cccc(n1)N2c3c(cnc(n3)Nc4ccc(cc4)N5CCN(CC5)C)C(=O)N2CC=C)O" 98D SMILES "OpenEye OEToolkits" 2.0.6 "CC(c1cccc(n1)N2c3c(cnc(n3)Nc4ccc(cc4)N5CCN(CC5)C)C(=O)N2CC=C)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 98D "SYSTEMATIC NAME" ACDLabs 12.01 "1-{6-[(1S)-1-hydroxyethyl]pyridin-2-yl}-6-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one" 98D "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "6-[[4-(4-methylpiperazin-1-yl)phenyl]amino]-1-[6-[(1~{S})-1-oxidanylethyl]pyridin-2-yl]-2-prop-2-enyl-pyrazolo[3,4-d]pyrimidin-3-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 98D "Create component" 2017-04-09 RCSB 98D "Initial release" 2018-04-04 RCSB #