data_9HY # _chem_comp.id 9HY _chem_comp.name "N-(6-cyano-3-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-4-methylnaphthalen-1-yl)-N-methylacetamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H24 N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-05-12 _chem_comp.pdbx_modified_date 2017-08-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 484.503 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9HY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5VQX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9HY C26 C1 C 0 1 N N N -30.229 -37.802 40.333 1.711 -1.269 2.771 C26 9HY 1 9HY C25 C2 C 0 1 N N N -31.537 -37.201 39.812 2.851 -2.098 2.237 C25 9HY 2 9HY C27 C3 C 0 1 N N N -33.764 -37.298 38.807 4.253 -2.864 0.397 C27 9HY 3 9HY N4 N1 N 0 1 N N N -35.953 -43.617 43.358 5.292 5.188 -0.306 N4 9HY 4 9HY C24 C4 C 0 1 N N N -32.278 -43.701 38.610 0.747 1.932 -2.393 C24 9HY 5 9HY C22 C5 C 0 1 Y N N -34.028 -39.737 41.109 4.339 0.620 0.774 C22 9HY 6 9HY C21 C6 C 0 1 Y N N -34.732 -40.602 41.965 4.864 1.869 0.675 C21 9HY 7 9HY N3 N2 N 0 1 N N N -32.545 -37.956 39.293 3.224 -1.979 0.947 N3 9HY 8 9HY C23 C7 C 0 1 N N N -35.378 -42.897 42.658 4.838 4.149 -0.236 C23 9HY 9 9HY C20 C8 C 0 1 Y N N -34.654 -41.994 41.778 4.265 2.839 -0.149 C20 9HY 10 9HY C1 C9 C 0 1 Y N N -27.636 -41.646 35.324 -2.175 -3.356 -0.560 C1 9HY 11 9HY C2 C10 C 0 1 Y N N -29.024 -41.830 35.532 -1.610 -2.109 -0.777 C2 9HY 12 9HY C7 C11 C 0 1 N N N -29.497 -42.437 33.245 -2.712 -1.373 1.198 C7 9HY 13 9HY C6 C12 C 0 1 Y N N -26.802 -41.337 36.416 -1.921 -4.392 -1.439 C6 9HY 14 9HY C5 C13 C 0 1 Y N N -27.346 -41.211 37.709 -1.105 -4.188 -2.536 C5 9HY 15 9HY C4 C14 C 0 1 Y N N -28.727 -41.392 37.917 -0.538 -2.946 -2.759 C4 9HY 16 9HY C3 C15 C 0 1 Y N N -29.562 -41.698 36.823 -0.789 -1.903 -1.881 C3 9HY 17 9HY C8 C16 C 0 1 N N N -30.603 -43.266 32.575 -2.874 -0.113 2.052 C8 9HY 18 9HY C9 C17 C 0 1 N N N -30.080 -45.595 33.112 -4.918 0.981 1.322 C9 9HY 19 9HY C10 C18 C 0 1 N N N -31.371 -46.821 34.827 -4.917 2.803 -0.141 C10 9HY 20 9HY C11 C19 C 0 1 N N N -32.160 -45.612 35.022 -3.504 2.744 -0.196 C11 9HY 21 9HY C12 C20 C 0 1 N N N -31.893 -44.505 34.291 -2.858 1.797 0.517 C12 9HY 22 9HY C13 C21 C 0 1 Y N N -31.656 -41.334 37.958 0.888 -0.358 -1.400 C13 9HY 23 9HY O2 O1 O 0 1 N N N -29.938 -42.132 34.553 -1.859 -1.089 0.087 O2 9HY 24 9HY O1 O2 O 0 1 N N N -30.915 -41.894 36.946 -0.232 -0.682 -2.098 O1 9HY 25 9HY N1 N3 N 0 1 N N N -30.883 -44.456 33.345 -3.575 0.914 1.278 N1 9HY 26 9HY C14 C22 C 0 1 Y N N -32.369 -42.193 38.819 1.412 0.911 -1.506 C14 9HY 27 9HY N2 N4 N 0 1 N N N -30.370 -46.721 33.867 -5.588 1.915 0.621 N2 9HY 28 9HY C15 C23 C 0 1 Y N N -33.155 -41.650 39.864 2.570 1.250 -0.786 C15 9HY 29 9HY C19 C24 C 0 1 Y N N -33.869 -42.512 40.733 3.126 2.536 -0.876 C19 9HY 30 9HY O5 O3 O 0 1 N N N -31.634 -35.976 39.881 3.433 -2.871 2.967 O5 9HY 31 9HY C16 C25 C 0 1 Y N N -33.232 -40.241 40.048 3.187 0.280 0.044 C16 9HY 32 9HY C17 C26 C 0 1 Y N N -32.508 -39.379 39.175 2.628 -1.012 0.134 C17 9HY 33 9HY C18 C27 C 0 1 Y N N -31.739 -39.938 38.133 1.493 -1.316 -0.584 C18 9HY 34 9HY O4 O4 O 0 1 N N N -31.531 -47.875 35.433 -5.522 3.648 -0.776 O4 9HY 35 9HY O3 O5 O 0 1 N N N -29.163 -45.637 32.295 -5.536 0.184 2.000 O3 9HY 36 9HY H1 H1 H 0 1 N N N -29.573 -36.996 40.695 2.105 -0.364 3.234 H1 9HY 37 9HY H2 H2 H 0 1 N N N -30.447 -38.496 41.158 1.044 -0.998 1.952 H2 9HY 38 9HY H3 H3 H 0 1 N N N -29.726 -38.346 39.520 1.159 -1.846 3.513 H3 9HY 39 9HY H4 H4 H 0 1 N N N -33.676 -36.211 38.949 3.779 -3.718 -0.086 H4 9HY 40 9HY H5 H5 H 0 1 N N N -33.898 -37.518 37.738 4.850 -2.318 -0.333 H5 9HY 41 9HY H6 H6 H 0 1 N N N -34.632 -37.672 39.370 4.898 -3.216 1.203 H6 9HY 42 9HY H7 H7 H 0 1 N N N -31.439 -44.103 39.196 0.005 2.484 -1.816 H7 9HY 43 9HY H8 H8 H 0 1 N N N -33.215 -44.174 38.940 1.497 2.623 -2.777 H8 9HY 44 9HY H9 H9 H 0 1 N N N -32.115 -43.914 37.543 0.258 1.427 -3.225 H9 9HY 45 9HY H10 H10 H 0 1 N N N -34.094 -38.670 41.262 4.811 -0.114 1.410 H10 9HY 46 9HY H11 H11 H 0 1 N N N -35.333 -40.198 42.766 5.752 2.120 1.236 H11 9HY 47 9HY H12 H12 H 0 1 N N N -27.219 -41.742 34.333 -2.809 -3.519 0.299 H12 9HY 48 9HY H13 H13 H 0 1 N N N -28.564 -43.018 33.288 -2.271 -2.166 1.801 H13 9HY 49 9HY H14 H14 H 0 1 N N N -29.326 -41.509 32.679 -3.688 -1.693 0.834 H14 9HY 50 9HY H15 H15 H 0 1 N N N -25.742 -41.196 36.261 -2.361 -5.363 -1.269 H15 9HY 51 9HY H16 H16 H 0 1 N N N -26.702 -40.975 38.543 -0.909 -5.000 -3.220 H16 9HY 52 9HY H17 H17 H 0 1 N N N -29.144 -41.297 38.909 0.099 -2.789 -3.616 H17 9HY 53 9HY H18 H18 H 0 1 N N N -31.517 -42.658 32.503 -3.451 -0.352 2.945 H18 9HY 54 9HY H19 H19 H 0 1 N N N -30.276 -43.557 31.566 -1.891 0.258 2.342 H19 9HY 55 9HY H20 H20 H 0 1 N N N -32.958 -45.599 35.750 -2.950 3.447 -0.801 H20 9HY 56 9HY H21 H21 H 0 1 N N N -32.493 -43.622 34.452 -1.780 1.736 0.487 H21 9HY 57 9HY H22 H22 H 0 1 N N N -29.809 -47.534 33.707 -6.556 1.949 0.663 H22 9HY 58 9HY H23 H23 H 0 1 N N N -33.809 -43.581 40.591 2.666 3.285 -1.505 H23 9HY 59 9HY H24 H24 H 0 1 N N N -31.205 -39.285 37.458 1.066 -2.305 -0.514 H24 9HY 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9HY O3 C9 DOUB N N 1 9HY C8 C7 SING N N 2 9HY C8 N1 SING N N 3 9HY C9 N1 SING N N 4 9HY C9 N2 SING N N 5 9HY C7 O2 SING N N 6 9HY N1 C12 SING N N 7 9HY N2 C10 SING N N 8 9HY C12 C11 DOUB N N 9 9HY O2 C2 SING N N 10 9HY C10 C11 SING N N 11 9HY C10 O4 DOUB N N 12 9HY C1 C2 DOUB Y N 13 9HY C1 C6 SING Y N 14 9HY C2 C3 SING Y N 15 9HY C6 C5 DOUB Y N 16 9HY C3 O1 SING N N 17 9HY C3 C4 DOUB Y N 18 9HY O1 C13 SING N N 19 9HY C5 C4 SING Y N 20 9HY C13 C18 DOUB Y N 21 9HY C13 C14 SING Y N 22 9HY C18 C17 SING Y N 23 9HY C24 C14 SING N N 24 9HY C27 N3 SING N N 25 9HY C14 C15 DOUB Y N 26 9HY C17 N3 SING N N 27 9HY C17 C16 DOUB Y N 28 9HY N3 C25 SING N N 29 9HY C25 O5 DOUB N N 30 9HY C25 C26 SING N N 31 9HY C15 C16 SING Y N 32 9HY C15 C19 SING Y N 33 9HY C16 C22 SING Y N 34 9HY C19 C20 DOUB Y N 35 9HY C22 C21 DOUB Y N 36 9HY C20 C21 SING Y N 37 9HY C20 C23 SING N N 38 9HY C23 N4 TRIP N N 39 9HY C26 H1 SING N N 40 9HY C26 H2 SING N N 41 9HY C26 H3 SING N N 42 9HY C27 H4 SING N N 43 9HY C27 H5 SING N N 44 9HY C27 H6 SING N N 45 9HY C24 H7 SING N N 46 9HY C24 H8 SING N N 47 9HY C24 H9 SING N N 48 9HY C22 H10 SING N N 49 9HY C21 H11 SING N N 50 9HY C1 H12 SING N N 51 9HY C7 H13 SING N N 52 9HY C7 H14 SING N N 53 9HY C6 H15 SING N N 54 9HY C5 H16 SING N N 55 9HY C4 H17 SING N N 56 9HY C8 H18 SING N N 57 9HY C8 H19 SING N N 58 9HY C11 H20 SING N N 59 9HY C12 H21 SING N N 60 9HY N2 H22 SING N N 61 9HY C19 H23 SING N N 62 9HY C18 H24 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9HY SMILES ACDLabs 12.01 "CC(=O)N(C)c1c4ccc(C#N)cc4c(C)c(c1)Oc2c(cccc2)OCCN3C(NC(C=C3)=O)=O" 9HY InChI InChI 1.03 "InChI=1S/C27H24N4O5/c1-17-21-14-19(16-28)8-9-20(21)22(30(3)18(2)32)15-25(17)36-24-7-5-4-6-23(24)35-13-12-31-11-10-26(33)29-27(31)34/h4-11,14-15H,12-13H2,1-3H3,(H,29,33,34)" 9HY InChIKey InChI 1.03 BUPXJFBLNQOLSS-UHFFFAOYSA-N 9HY SMILES_CANONICAL CACTVS 3.385 "CN(C(C)=O)c1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c(C)c4cc(ccc14)C#N" 9HY SMILES CACTVS 3.385 "CN(C(C)=O)c1cc(Oc2ccccc2OCCN3C=CC(=O)NC3=O)c(C)c4cc(ccc14)C#N" 9HY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)N(C)C(=O)C)C#N" 9HY SMILES "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)N(C)C(=O)C)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9HY "SYSTEMATIC NAME" ACDLabs 12.01 "N-(6-cyano-3-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-4-methylnaphthalen-1-yl)-N-methylacetamide" 9HY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[3-[2-[2-[2,4-bis(oxidanylidene)pyrimidin-1-yl]ethoxy]phenoxy]-6-cyano-4-methyl-naphthalen-1-yl]-~{N}-methyl-ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9HY "Create component" 2017-05-12 RCSB 9HY "Initial release" 2017-08-23 RCSB #