data_9K5 # _chem_comp.id 9K5 _chem_comp.name "[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl 3-fluorosulfonylbenzoate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H16 F N5 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-05-28 _chem_comp.pdbx_modified_date 2018-02-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 453.402 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9K5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5O49 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9K5 C1 C1 C 0 1 Y N N 86.267 6.928 14.464 -3.068 -0.575 1.486 C1 9K5 1 9K5 C2 C2 C 0 1 Y N N 86.824 8.078 13.893 -3.399 0.140 0.333 C2 9K5 2 9K5 C3 C3 C 0 1 Y N N 87.546 8.969 14.683 -4.687 0.040 -0.197 C3 9K5 3 9K5 O4 O1 O 0 1 N N N 86.200 5.503 9.448 1.738 0.628 0.128 O4 9K5 4 9K5 O5 O2 O 0 1 N N N 83.530 3.584 10.882 4.426 2.920 0.382 O5 9K5 5 9K5 C7 C4 C 0 1 N N N 85.730 7.733 10.204 -0.212 1.957 -0.503 C7 9K5 6 9K5 C8 C5 C 0 1 N N R 85.172 6.505 9.507 1.135 1.937 0.224 C8 9K5 7 9K5 C9 C6 C 0 1 N N S 83.971 5.902 10.242 2.136 2.885 -0.474 C9 9K5 8 9K5 C10 C7 C 0 1 N N R 84.512 4.625 10.838 3.489 2.145 -0.368 C10 9K5 9 9K5 C11 C8 C 0 1 N N R 85.663 4.263 9.914 3.145 0.838 0.380 C11 9K5 10 9K5 C12 C9 C 0 1 Y N N 87.329 3.755 11.753 3.555 -1.122 -1.156 C12 9K5 11 9K5 C13 C10 C 0 1 Y N N 88.143 1.876 10.994 5.531 -1.764 -0.536 C13 9K5 12 9K5 C14 C11 C 0 1 Y N N 87.217 2.341 10.080 5.180 -0.662 0.262 C14 9K5 13 9K5 C15 C12 C 0 1 Y N N 87.668 0.519 8.676 7.198 -0.828 1.349 C15 9K5 14 9K5 C16 C13 C 0 1 Y N N 88.794 0.682 10.723 6.782 -2.367 -0.321 C16 9K5 15 9K5 O2 O3 O 0 1 N N N 87.172 9.389 11.950 -2.682 1.621 -1.324 O2 9K5 16 9K5 C6 C14 C 0 1 N N N 86.658 8.375 12.436 -2.391 1.000 -0.321 C6 9K5 17 9K5 C4 C15 C 0 1 Y N N 87.712 8.715 16.040 -5.622 -0.763 0.420 C4 9K5 18 9K5 S S1 S 0 1 N N N 88.626 9.875 16.961 -7.248 -0.891 -0.248 S 9K5 19 9K5 O1 O4 O 0 1 N N N 88.801 9.448 18.325 -7.219 -1.974 -1.168 O1 9K5 20 9K5 O O5 O 0 1 N N N 87.988 11.163 16.917 -8.141 -0.833 0.855 O 9K5 21 9K5 C5 C16 C 0 1 Y N N 87.163 7.569 16.623 -5.288 -1.470 1.562 C5 9K5 22 9K5 C C17 C 0 1 Y N N 86.438 6.673 15.830 -4.014 -1.375 2.092 C 9K5 23 9K5 O3 O6 O 0 1 N N N 85.917 7.463 11.587 -1.150 1.094 0.193 O3 9K5 24 9K5 O6 O7 O 0 1 N N N 82.979 5.573 9.253 2.197 4.139 0.209 O6 9K5 25 9K5 N N1 N 0 1 Y N N 86.715 3.473 10.581 3.930 -0.277 -0.154 N 9K5 26 9K5 N2 N2 N 0 1 Y N N 87.001 1.657 8.925 6.037 -0.231 1.181 N2 9K5 27 9K5 N3 N3 N 0 1 Y N N 88.550 0.027 9.564 7.576 -1.862 0.618 N3 9K5 28 9K5 N4 N4 N 0 1 N N N 89.722 0.170 11.686 7.179 -3.461 -1.070 N4 9K5 29 9K5 N1 N5 N 0 1 Y N N 88.213 2.768 12.011 4.494 -1.995 -1.376 N1 9K5 30 9K5 H1 H1 H 0 1 N N N 85.706 6.238 13.851 -2.072 -0.506 1.899 H1 9K5 31 9K5 H2 H2 H 0 1 N N N 87.976 9.856 14.242 -4.949 0.591 -1.088 H2 9K5 32 9K5 H3 H3 H 0 1 N N N 82.825 3.838 11.466 4.631 3.779 -0.012 H3 9K5 33 9K5 H4 H4 H 0 1 N N N 86.696 8.002 9.751 -0.600 2.976 -0.521 H4 9K5 34 9K5 H5 H5 H 0 1 N N N 85.025 8.570 10.088 -0.079 1.601 -1.524 H5 9K5 35 9K5 H6 H6 H 0 1 N N N 84.860 6.784 8.490 1.006 2.220 1.268 H6 9K5 36 9K5 H7 H7 H 0 1 N N N 83.591 6.584 11.017 1.860 3.030 -1.518 H7 9K5 37 9K5 H8 H8 H 0 1 N N N 84.904 4.828 11.845 3.883 1.927 -1.361 H8 9K5 38 9K5 H9 H9 H 0 1 N N N 85.263 3.688 9.066 3.326 0.952 1.449 H9 9K5 39 9K5 H10 H10 H 0 1 N N N 87.144 4.619 12.374 2.614 -1.076 -1.685 H10 9K5 40 9K5 H11 H11 H 0 1 N N N 87.494 -0.009 7.750 7.872 -0.453 2.105 H11 9K5 41 9K5 H14 H14 H 0 1 N N N 87.298 7.377 17.677 -6.024 -2.098 2.040 H14 9K5 42 9K5 H15 H15 H 0 1 N N N 86.010 5.785 16.271 -3.757 -1.933 2.981 H15 9K5 43 9K5 H16 H16 H 0 1 N N N 82.219 5.195 9.680 2.810 4.773 -0.187 H16 9K5 44 9K5 H17 H17 H 0 1 N N N 90.111 -0.688 11.351 6.591 -3.820 -1.752 H17 9K5 45 9K5 H18 H18 H 0 1 N N N 90.455 0.835 11.828 8.045 -3.868 -0.912 H18 9K5 46 9K5 F1 F1 F 0 1 N Y N 90.101 10.027 16.167 -7.512 0.438 -1.118 F1 9K5 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9K5 C15 N2 DOUB Y N 1 9K5 C15 N3 SING Y N 2 9K5 N2 C14 SING Y N 3 9K5 O6 C9 SING N N 4 9K5 O4 C8 SING N N 5 9K5 O4 C11 SING N N 6 9K5 C8 C7 SING N N 7 9K5 C8 C9 SING N N 8 9K5 N3 C16 DOUB Y N 9 9K5 C11 N SING N N 10 9K5 C11 C10 SING N N 11 9K5 C14 N SING Y N 12 9K5 C14 C13 DOUB Y N 13 9K5 C7 O3 SING N N 14 9K5 C9 C10 SING N N 15 9K5 N C12 SING Y N 16 9K5 C16 C13 SING Y N 17 9K5 C16 N4 SING N N 18 9K5 C10 O5 SING N N 19 9K5 C13 N1 SING Y N 20 9K5 O3 C6 SING N N 21 9K5 C12 N1 DOUB Y N 22 9K5 O2 C6 DOUB N N 23 9K5 C6 C2 SING N N 24 9K5 C2 C1 DOUB Y N 25 9K5 C2 C3 SING Y N 26 9K5 C1 C SING Y N 27 9K5 C3 C4 DOUB Y N 28 9K5 C C5 DOUB Y N 29 9K5 C4 C5 SING Y N 30 9K5 C4 S SING N N 31 9K5 O S DOUB N N 32 9K5 S O1 DOUB N N 33 9K5 C1 H1 SING N N 34 9K5 C3 H2 SING N N 35 9K5 O5 H3 SING N N 36 9K5 C7 H4 SING N N 37 9K5 C7 H5 SING N N 38 9K5 C8 H6 SING N N 39 9K5 C9 H7 SING N N 40 9K5 C10 H8 SING N N 41 9K5 C11 H9 SING N N 42 9K5 C12 H10 SING N N 43 9K5 C15 H11 SING N N 44 9K5 C5 H14 SING N N 45 9K5 C H15 SING N N 46 9K5 O6 H16 SING N N 47 9K5 N4 H17 SING N N 48 9K5 N4 H18 SING N N 49 9K5 S F1 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9K5 InChI InChI 1.03 "InChI=1S/C17H16FN5O7S/c18-31(27,28)9-3-1-2-8(4-9)17(26)29-5-10-12(24)13(25)16(30-10)23-7-22-11-14(19)20-6-21-15(11)23/h1-4,6-7,10,12-13,16,24-25H,5H2,(H2,19,20,21)/t10-,12-,13-,16-/m1/s1" 9K5 InChIKey InChI 1.03 OZYWTUCVPSLDJN-XNIJJKJLSA-N 9K5 SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](COC(=O)c4cccc(c4)[S](F)(=O)=O)[C@@H](O)[C@H]3O" 9K5 SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH](COC(=O)c4cccc(c4)[S](F)(=O)=O)[CH](O)[CH]3O" 9K5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(cc(c1)S(=O)(=O)F)C(=O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O" 9K5 SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(cc(c1)S(=O)(=O)F)C(=O)OCC2C(C(C(O2)n3cnc4c3ncnc4N)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9K5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl 3-fluorosulfonylbenzoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9K5 "Create component" 2017-05-28 EBI 9K5 "Initial release" 2018-02-07 RCSB #