data_9K8 # _chem_comp.id 9K8 _chem_comp.name "[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl 4-ethyl-3-fluorosulfonyl-benzoate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H20 F N5 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-05-28 _chem_comp.pdbx_modified_date 2018-02-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 481.455 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9K8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5O4A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9K8 C1 C1 C 0 1 N N N 30.757 9.889 19.760 6.120 1.929 1.732 C1 9K8 1 9K8 C2 C2 C 0 1 Y N N 30.799 9.358 21.179 5.020 1.060 1.178 C2 9K8 2 9K8 C3 C3 C 0 1 Y N N 31.601 8.242 21.436 3.760 1.097 1.747 C3 9K8 3 9K8 O4 O1 O 0 1 N N N 30.802 3.850 25.794 -2.161 -0.717 0.133 O4 9K8 4 9K8 O5 O2 O 0 1 N N N 33.293 2.042 23.961 -4.973 -2.800 0.676 O5 9K8 5 9K8 C7 C4 C 0 1 Y N N 30.071 9.873 22.268 5.274 0.232 0.098 C7 9K8 6 9K8 C8 C5 C 0 1 N N N 31.023 7.649 25.136 1.922 -1.390 -0.383 C8 9K8 7 9K8 C9 C6 C 0 1 N N N 31.853 5.912 26.510 -0.316 -2.221 -0.415 C9 9K8 8 9K8 C10 C7 C 0 1 N N R 31.990 4.417 26.386 -1.635 -2.046 0.340 C10 9K8 9 9K8 C11 C8 C 0 1 N N S 33.189 3.911 25.574 -2.713 -2.991 -0.237 C11 9K8 10 9K8 C12 C9 C 0 1 N N R 32.541 3.168 24.397 -4.015 -2.161 -0.170 C12 9K8 11 9K8 C13 C10 C 0 1 N N R 31.198 2.757 24.997 -3.569 -0.813 0.440 C13 9K8 12 9K8 C14 C11 C 0 1 Y N N 29.633 3.374 23.100 -3.908 1.014 -1.268 C14 9K8 13 9K8 C15 C12 C 0 1 Y N N 28.609 1.550 22.753 -5.818 1.840 -0.660 C15 9K8 14 9K8 C16 C13 C 0 1 Y N N 29.487 1.306 23.803 -5.512 0.795 0.228 C16 9K8 15 9K8 O2 O3 O 0 1 N N N 30.486 8.158 26.087 2.144 -2.121 -1.327 O2 9K8 16 9K8 C5 C14 C 0 1 Y N N 30.962 8.203 23.760 3.000 -0.538 0.160 C5 9K8 17 9K8 C4 C15 C 0 1 Y N N 31.719 7.702 22.708 2.749 0.304 1.245 C4 9K8 18 9K8 C6 C16 C 0 1 Y N N 30.157 9.311 23.534 4.273 -0.566 -0.414 C6 9K8 19 9K8 S S1 S 0 1 N N N 29.018 11.190 22.221 6.881 0.199 -0.624 S 9K8 20 9K8 O1 O4 O 0 1 N N N 29.624 12.287 21.571 7.609 -0.810 0.063 O1 9K8 21 9K8 O O5 O 0 1 N N N 28.382 11.359 23.464 6.688 0.194 -2.032 O 9K8 22 9K8 C C17 C 0 1 N N N 31.928 10.760 19.351 6.194 3.230 0.930 C 9K8 23 9K8 O3 O6 O 0 1 N N N 31.734 6.519 25.202 0.694 -1.357 0.170 O3 9K8 24 9K8 O6 O7 O 0 1 N N N 34.040 3.097 26.375 -2.828 -4.168 0.565 O6 9K8 25 9K8 N N1 N 0 1 Y N N 30.153 2.498 24.017 -4.302 0.294 -0.180 N 9K8 26 9K8 N2 N2 N 0 1 Y N N 29.653 0.151 24.461 -6.364 0.509 1.207 N2 9K8 27 9K8 C17 C18 C 0 1 Y N N 28.853 -0.801 23.969 -7.481 1.193 1.346 C17 9K8 28 9K8 N3 N3 N 0 1 Y N N 27.967 -0.717 22.968 -7.811 2.182 0.536 N3 9K8 29 9K8 C18 C19 C 0 1 Y N N 27.810 0.469 22.337 -7.022 2.540 -0.471 C18 9K8 30 9K8 N4 N4 N 0 1 N N N 26.958 0.536 21.307 -7.376 3.579 -1.314 N4 9K8 31 9K8 N1 N5 N 0 1 Y N N 28.732 2.859 22.311 -4.798 1.921 -1.548 N1 9K8 32 9K8 F F1 F 0 1 N Y N 28.713 11.389 20.930 7.594 1.597 -0.268 F 9K8 33 9K8 H1 H1 H 0 1 N N N 30.722 9.027 19.077 5.910 2.158 2.777 H1 9K8 34 9K8 H2 H2 H 0 1 N N N 29.838 10.483 19.648 7.071 1.402 1.659 H2 9K8 35 9K8 H3 H3 H 0 1 N N N 32.144 7.787 20.621 3.567 1.748 2.587 H3 9K8 36 9K8 H4 H4 H 0 1 N N N 32.846 1.624 23.235 -5.242 -3.678 0.372 H4 9K8 37 9K8 H5 H5 H 0 1 N N N 30.955 6.146 27.101 0.009 -3.259 -0.344 H5 9K8 38 9K8 H6 H6 H 0 1 N N N 32.741 6.316 27.017 -0.458 -1.955 -1.463 H6 9K8 39 9K8 H7 H7 H 0 1 N N N 32.094 4.011 27.403 -1.491 -2.237 1.403 H7 9K8 40 9K8 H8 H8 H 0 1 N N N 33.744 4.777 25.184 -2.480 -3.252 -1.269 H8 9K8 41 9K8 H9 H9 H 0 1 N N N 32.372 3.873 23.569 -4.426 -2.014 -1.168 H9 9K8 42 9K8 H10 H10 H 0 1 N N N 31.349 1.864 25.621 -3.723 -0.815 1.518 H10 9K8 43 9K8 H11 H11 H 0 1 N N N 29.944 4.406 23.036 -2.989 0.858 -1.814 H11 9K8 44 9K8 H12 H12 H 0 1 N N N 32.405 6.886 22.882 1.766 0.333 1.691 H12 9K8 45 9K8 H13 H13 H 0 1 N N N 29.593 9.739 24.350 4.472 -1.211 -1.257 H13 9K8 46 9K8 H15 H15 H 0 1 N N N 31.795 11.088 18.309 5.243 3.757 1.003 H15 9K8 47 9K8 H16 H16 H 0 1 N N N 31.978 11.640 20.009 6.989 3.859 1.331 H16 9K8 48 9K8 H17 H17 H 0 1 N N N 32.861 10.184 19.438 6.403 3.001 -0.115 H17 9K8 49 9K8 H18 H18 H 0 1 N N N 34.774 2.796 25.853 -3.491 -4.797 0.249 H18 9K8 50 9K8 H19 H19 H 0 1 N N N 28.932 -1.768 24.443 -8.151 0.935 2.152 H19 9K8 51 9K8 H20 H20 H 0 1 N N N 26.544 -0.362 21.157 -6.791 3.831 -2.045 H20 9K8 52 9K8 H21 H21 H 0 1 N N N 26.241 1.203 21.510 -8.210 4.055 -1.173 H21 9K8 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9K8 C1 C2 SING N N 1 9K8 C1 C SING N N 2 9K8 C2 C3 DOUB Y N 3 9K8 C2 C7 SING Y N 4 9K8 C3 C4 SING Y N 5 9K8 O4 C10 SING N N 6 9K8 O4 C13 SING N N 7 9K8 O5 C12 SING N N 8 9K8 C7 C6 DOUB Y N 9 9K8 C7 S SING N N 10 9K8 C8 O2 DOUB N N 11 9K8 C8 C5 SING N N 12 9K8 C8 O3 SING N N 13 9K8 C9 C10 SING N N 14 9K8 C9 O3 SING N N 15 9K8 C10 C11 SING N N 16 9K8 C11 C12 SING N N 17 9K8 C11 O6 SING N N 18 9K8 C12 C13 SING N N 19 9K8 C13 N SING N N 20 9K8 C14 N SING Y N 21 9K8 C14 N1 DOUB Y N 22 9K8 C15 C16 DOUB Y N 23 9K8 C15 C18 SING Y N 24 9K8 C15 N1 SING Y N 25 9K8 C16 N SING Y N 26 9K8 C16 N2 SING Y N 27 9K8 C5 C4 DOUB Y N 28 9K8 C5 C6 SING Y N 29 9K8 S O1 DOUB N N 30 9K8 S O DOUB N N 31 9K8 S F SING N N 32 9K8 N2 C17 DOUB Y N 33 9K8 C17 N3 SING Y N 34 9K8 N3 C18 DOUB Y N 35 9K8 C18 N4 SING N N 36 9K8 C1 H1 SING N N 37 9K8 C1 H2 SING N N 38 9K8 C3 H3 SING N N 39 9K8 O5 H4 SING N N 40 9K8 C9 H5 SING N N 41 9K8 C9 H6 SING N N 42 9K8 C10 H7 SING N N 43 9K8 C11 H8 SING N N 44 9K8 C12 H9 SING N N 45 9K8 C13 H10 SING N N 46 9K8 C14 H11 SING N N 47 9K8 C4 H12 SING N N 48 9K8 C6 H13 SING N N 49 9K8 C H15 SING N N 50 9K8 C H16 SING N N 51 9K8 C H17 SING N N 52 9K8 O6 H18 SING N N 53 9K8 C17 H19 SING N N 54 9K8 N4 H20 SING N N 55 9K8 N4 H21 SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9K8 InChI InChI 1.03 "InChI=1S/C19H20FN5O7S/c1-2-9-3-4-10(5-12(9)33(20,29)30)19(28)31-6-11-14(26)15(27)18(32-11)25-8-24-13-16(21)22-7-23-17(13)25/h3-5,7-8,11,14-15,18,26-27H,2,6H2,1H3,(H2,21,22,23)/t11-,14-,15-,18-/m1/s1" 9K8 InChIKey InChI 1.03 BSCRHVZAWVIUPR-XKLVTHTNSA-N 9K8 SMILES_CANONICAL CACTVS 3.385 "CCc1ccc(cc1[S](F)(=O)=O)C(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4c(N)ncnc34" 9K8 SMILES CACTVS 3.385 "CCc1ccc(cc1[S](F)(=O)=O)C(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4c(N)ncnc34" 9K8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCc1ccc(cc1S(=O)(=O)F)C(=O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3ncnc4N)O)O" 9K8 SMILES "OpenEye OEToolkits" 2.0.6 "CCc1ccc(cc1S(=O)(=O)F)C(=O)OCC2C(C(C(O2)n3cnc4c3ncnc4N)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9K8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl 4-ethyl-3-fluorosulfonyl-benzoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9K8 "Create component" 2017-05-28 EBI 9K8 "Initial release" 2018-02-07 RCSB #