data_9L4 # _chem_comp.id 9L4 _chem_comp.name "3-chloro-4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)benzoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H23 Cl2 F2 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-05-19 _chem_comp.pdbx_modified_date 2017-06-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 558.403 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9L4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5Q0N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9L4 N1 N1 N 0 1 Y N N 23.139 18.072 3.553 1.985 -0.671 0.129 N1 9L4 1 9L4 N3 N2 N 0 1 Y N N 22.821 16.370 2.124 2.792 -2.516 -0.739 N3 9L4 2 9L4 C4 C1 C 0 1 Y N N 24.367 17.445 3.423 3.199 -0.350 -0.448 C4 9L4 3 9L4 C5 C2 C 0 1 Y N N 24.161 16.398 2.543 3.700 -1.543 -0.998 C5 9L4 4 9L4 C6 C3 C 0 1 N N N 23.759 20.458 4.064 -0.202 0.380 0.054 C6 9L4 5 9L4 C7 C4 C 0 1 N N S 22.802 19.283 4.416 1.084 0.248 0.829 C7 9L4 6 9L4 C8 C5 C 0 1 Y N N 25.594 17.720 4.007 3.927 0.826 -0.563 C8 9L4 7 9L4 C10 C6 C 0 1 Y N N 25.229 15.569 2.207 4.935 -1.534 -1.655 C10 9L4 8 9L4 C13 C7 C 0 1 N N N 27.530 24.634 0.631 -6.162 1.243 -2.174 C13 9L4 9 9L4 C15 C8 C 0 1 Y N N 26.451 15.845 2.786 5.644 -0.358 -1.762 C15 9L4 10 9L4 C17 C9 C 0 1 Y N N 24.464 22.845 1.974 -3.404 2.058 0.236 C17 9L4 11 9L4 C21 C10 C 0 1 Y N N 26.287 21.272 1.936 -2.740 0.155 -1.090 C21 9L4 12 9L4 C22 C11 C 0 1 Y N N 27.114 22.270 1.427 -3.938 0.203 -1.766 C22 9L4 13 9L4 C24 C12 C 0 1 Y N N 19.813 16.910 3.100 0.306 -4.016 -0.180 C24 9L4 14 9L4 O20 O1 O 0 1 N N N 27.022 25.822 0.668 -7.066 2.195 -1.870 O20 9L4 15 9L4 O29 O2 O 0 1 N N N 28.653 24.400 0.180 -6.405 0.430 -3.043 O29 9L4 16 9L4 C16 C13 C 0 1 Y N N 26.626 23.552 1.189 -4.877 1.189 -1.451 C16 9L4 17 9L4 C12 C14 C 0 1 Y N N 24.944 21.544 2.216 -2.467 1.080 -0.087 C12 9L4 18 9L4 N9 N3 N 0 1 N N N 24.081 20.551 2.745 -1.252 1.028 0.596 N9 9L4 19 9L4 O19 O3 O 0 1 N N N 24.177 21.222 4.923 -0.291 -0.098 -1.058 O19 9L4 20 9L4 C23 C15 C 0 1 N N N 22.837 18.909 5.922 1.750 1.620 0.950 C23 9L4 21 9L4 C34 C16 C 0 1 N N N 21.973 19.842 6.768 0.753 2.620 1.540 C34 9L4 22 9L4 C37 C17 C 0 1 N N N 22.104 19.520 8.269 1.418 3.993 1.660 C37 9L4 23 9L4 C38 C18 C 0 1 N N N 21.709 18.064 8.576 2.639 3.889 2.576 C38 9L4 24 9L4 C36 C19 C 0 1 N N N 22.480 17.066 7.692 3.636 2.889 1.986 C36 9L4 25 9L4 C35 C20 C 0 1 N N N 22.386 17.457 6.171 2.971 1.516 1.865 C35 9L4 26 9L4 C2 C21 C 0 1 Y N N 22.251 17.384 2.747 1.778 -2.008 -0.082 C2 9L4 27 9L4 F27 F1 F 0 1 N N N 27.511 15.068 2.489 6.837 -0.350 -2.395 F27 9L4 28 9L4 C11 C22 C 0 1 Y N N 26.625 16.898 3.666 5.143 0.820 -1.217 C11 9L4 29 9L4 F26 F2 F 0 1 N N N 27.846 17.119 4.203 5.850 1.966 -1.330 F26 9L4 30 9L4 C14 C23 C 0 1 Y N N 20.822 17.742 2.609 0.594 -2.768 0.375 C14 9L4 31 9L4 C32 C24 C 0 1 Y N N 18.476 17.265 2.969 -0.803 -4.717 0.245 C32 9L4 32 9L4 C30 C25 C 0 1 Y N N 18.154 18.459 2.352 -1.627 -4.188 1.225 C30 9L4 33 9L4 CL33 CL1 CL 0 0 N N N 16.482 18.916 2.190 -3.021 -5.076 1.755 CL33 9L4 34 9L4 C31 C26 C 0 1 Y N N 19.131 19.304 1.863 -1.342 -2.953 1.783 C31 9L4 35 9L4 C25 C27 C 0 1 Y N N 20.461 18.942 1.994 -0.239 -2.240 1.362 C25 9L4 36 9L4 CL28 CL2 CL 0 0 N N N 22.802 23.241 2.304 -3.058 3.210 1.487 CL28 9L4 37 9L4 C18 C28 C 0 1 Y N N 25.287 23.834 1.467 -4.602 2.115 -0.440 C18 9L4 38 9L4 H1 H1 H 0 1 N N N 21.777 19.601 4.173 0.870 -0.141 1.824 H1 9L4 39 9L4 H2 H2 H 0 1 N N N 25.725 18.542 4.695 3.543 1.743 -0.141 H2 9L4 40 9L4 H3 H3 H 0 1 N N N 25.106 14.744 1.521 5.331 -2.446 -2.076 H3 9L4 41 9L4 H4 H4 H 0 1 N N N 26.684 20.284 2.115 -2.010 -0.602 -1.338 H4 9L4 42 9L4 H5 H5 H 0 1 N N N 28.149 22.046 1.214 -4.149 -0.516 -2.544 H5 9L4 43 9L4 H6 H6 H 0 1 N N N 20.075 15.982 3.586 0.947 -4.429 -0.944 H6 9L4 44 9L4 H7 H7 H 0 1 N N N 27.641 26.443 0.303 -7.893 2.190 -2.370 H7 9L4 45 9L4 H8 H8 H 0 1 N N N 23.687 19.882 2.114 -1.163 1.458 1.460 H8 9L4 46 9L4 H9 H9 H 0 1 N N N 23.877 19.003 6.266 2.063 1.960 -0.037 H9 9L4 47 9L4 H10 H10 H 0 1 N N N 22.292 20.880 6.595 -0.117 2.694 0.887 H10 9L4 48 9L4 H11 H11 H 0 1 N N N 20.921 19.727 6.467 0.439 2.281 2.527 H11 9L4 49 9L4 H12 H12 H 0 1 N N N 23.148 19.679 8.578 1.732 4.332 0.674 H12 9L4 50 9L4 H13 H13 H 0 1 N N N 21.447 20.195 8.837 0.708 4.705 2.081 H13 9L4 51 9L4 H14 H14 H 0 1 N N N 20.631 17.941 8.395 3.113 4.866 2.662 H14 9L4 52 9L4 H15 H15 H 0 1 N N N 21.930 17.850 9.632 2.325 3.549 3.563 H15 9L4 53 9L4 H16 H16 H 0 1 N N N 22.054 16.061 7.831 3.950 3.228 0.999 H16 9L4 54 9L4 H17 H17 H 0 1 N N N 23.537 17.061 7.996 4.506 2.815 2.639 H17 9L4 55 9L4 H18 H18 H 0 1 N N N 21.343 17.347 5.839 2.657 1.177 2.852 H18 9L4 56 9L4 H19 H19 H 0 1 N N N 23.029 16.780 5.589 3.681 0.804 1.445 H19 9L4 57 9L4 H20 H20 H 0 1 N N N 17.698 16.616 3.344 -1.030 -5.680 -0.187 H20 9L4 58 9L4 H21 H21 H 0 1 N N N 18.861 20.234 1.385 -1.988 -2.545 2.546 H21 9L4 59 9L4 H22 H22 H 0 1 N N N 21.231 19.598 1.615 -0.019 -1.277 1.798 H22 9L4 60 9L4 H23 H23 H 0 1 N N N 24.894 24.824 1.286 -5.329 2.873 -0.189 H23 9L4 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9L4 O29 C13 DOUB N N 1 9L4 C13 O20 SING N N 2 9L4 C13 C16 SING N N 3 9L4 C16 C22 DOUB Y N 4 9L4 C16 C18 SING Y N 5 9L4 C22 C21 SING Y N 6 9L4 C18 C17 DOUB Y N 7 9L4 C31 C25 DOUB Y N 8 9L4 C31 C30 SING Y N 9 9L4 C21 C12 DOUB Y N 10 9L4 C17 C12 SING Y N 11 9L4 C17 CL28 SING N N 12 9L4 C25 C14 SING Y N 13 9L4 N3 C5 SING Y N 14 9L4 N3 C2 DOUB Y N 15 9L4 CL33 C30 SING N N 16 9L4 C10 C5 DOUB Y N 17 9L4 C10 C15 SING Y N 18 9L4 C12 N9 SING N N 19 9L4 C30 C32 DOUB Y N 20 9L4 F27 C15 SING N N 21 9L4 C5 C4 SING Y N 22 9L4 C14 C2 SING N N 23 9L4 C14 C24 DOUB Y N 24 9L4 N9 C6 SING N N 25 9L4 C2 N1 SING Y N 26 9L4 C15 C11 DOUB Y N 27 9L4 C32 C24 SING Y N 28 9L4 C4 N1 SING Y N 29 9L4 C4 C8 DOUB Y N 30 9L4 N1 C7 SING N N 31 9L4 C11 C8 SING Y N 32 9L4 C11 F26 SING N N 33 9L4 C6 C7 SING N N 34 9L4 C6 O19 DOUB N N 35 9L4 C7 C23 SING N N 36 9L4 C23 C35 SING N N 37 9L4 C23 C34 SING N N 38 9L4 C35 C36 SING N N 39 9L4 C34 C37 SING N N 40 9L4 C36 C38 SING N N 41 9L4 C37 C38 SING N N 42 9L4 C7 H1 SING N N 43 9L4 C8 H2 SING N N 44 9L4 C10 H3 SING N N 45 9L4 C21 H4 SING N N 46 9L4 C22 H5 SING N N 47 9L4 C24 H6 SING N N 48 9L4 O20 H7 SING N N 49 9L4 N9 H8 SING N N 50 9L4 C23 H9 SING N N 51 9L4 C34 H10 SING N N 52 9L4 C34 H11 SING N N 53 9L4 C37 H12 SING N N 54 9L4 C37 H13 SING N N 55 9L4 C38 H14 SING N N 56 9L4 C38 H15 SING N N 57 9L4 C36 H16 SING N N 58 9L4 C36 H17 SING N N 59 9L4 C35 H18 SING N N 60 9L4 C35 H19 SING N N 61 9L4 C32 H20 SING N N 62 9L4 C31 H21 SING N N 63 9L4 C25 H22 SING N N 64 9L4 C18 H23 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9L4 SMILES ACDLabs 12.01 "n3(C(C(=O)Nc1c(Cl)cc(C(O)=O)cc1)C2CCCCC2)c5cc(c(cc5nc3c4ccc(Cl)cc4)F)F" 9L4 InChI InChI 1.03 "InChI=1S/C28H23Cl2F2N3O3/c29-18-9-6-16(7-10-18)26-33-23-13-20(31)21(32)14-24(23)35(26)25(15-4-2-1-3-5-15)27(36)34-22-11-8-17(28(37)38)12-19(22)30/h6-15,25H,1-5H2,(H,34,36)(H,37,38)/t25-/m0/s1" 9L4 InChIKey InChI 1.03 OLLRSJLKNAIFCJ-VWLOTQADSA-N 9L4 SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1ccc(NC(=O)[C@H](C2CCCCC2)n3c4cc(F)c(F)cc4nc3c5ccc(Cl)cc5)c(Cl)c1" 9L4 SMILES CACTVS 3.385 "OC(=O)c1ccc(NC(=O)[CH](C2CCCCC2)n3c4cc(F)c(F)cc4nc3c5ccc(Cl)cc5)c(Cl)c1" 9L4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1c2nc3cc(c(cc3n2[C@@H](C4CCCCC4)C(=O)Nc5ccc(cc5Cl)C(=O)O)F)F)Cl" 9L4 SMILES "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1c2nc3cc(c(cc3n2C(C4CCCCC4)C(=O)Nc5ccc(cc5Cl)C(=O)O)F)F)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9L4 "SYSTEMATIC NAME" ACDLabs 12.01 "3-chloro-4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)benzoic acid" 9L4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "3-chloranyl-4-[[(2~{S})-2-[2-(4-chlorophenyl)-5,6-bis(fluoranyl)benzimidazol-1-yl]-2-cyclohexyl-ethanoyl]amino]benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9L4 "Create component" 2017-05-19 RCSB 9L4 "Initial release" 2017-07-05 RCSB #