data_9TC # _chem_comp.id 9TC _chem_comp.name "(8-oxa-2-azaspiro[4.5]decan-2-yl)(2-{[(pyrazin-2-yl)methyl]amino}pyrimidin-5-yl)methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H22 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-26 _chem_comp.pdbx_modified_date 2022-01-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 354.406 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9TC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7SLV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9TC N3 N1 N 0 1 N N N 17.106 -30.642 -29.679 3.533 0.101 0.267 N3 9TC 1 9TC C4 C1 C 0 1 Y N N 20.297 -30.274 -31.497 6.769 -0.460 0.515 C4 9TC 2 9TC N2 N2 N 0 1 Y N N 21.163 -29.323 -31.918 7.945 0.089 0.765 N2 9TC 3 9TC C7 C2 C 0 1 Y N N 17.175 -29.715 -26.246 0.660 -1.686 -0.813 C7 9TC 4 9TC C6 C3 C 0 1 Y N N 17.612 -30.350 -28.429 2.224 -0.326 0.188 C6 9TC 5 9TC C9 C4 C 0 1 Y N N 19.375 -30.328 -26.937 0.060 -0.175 0.959 C9 9TC 6 9TC C13 C5 C 0 1 N N N 17.301 -27.072 -22.573 -4.888 0.112 0.207 C13 9TC 7 9TC C8 C6 C 0 1 Y N N 18.524 -29.871 -25.911 -0.322 -1.155 0.033 C8 9TC 8 9TC N5 N3 N 0 1 Y N N 18.968 -30.568 -28.193 1.323 0.203 1.007 N5 9TC 9 9TC C18 C7 C 0 1 N N N 15.855 -26.750 -22.202 -6.123 0.281 1.087 C18 9TC 10 9TC C16 C8 C 0 1 N N N 17.358 -24.788 -23.636 -6.069 1.375 -1.589 C16 9TC 11 9TC C1 C9 C 0 1 Y N N 20.676 -28.066 -32.010 8.272 1.237 0.197 C1 9TC 12 9TC C2 C10 C 0 1 Y N N 19.336 -27.764 -31.693 7.383 1.863 -0.659 C2 9TC 13 9TC N1 N4 N 0 1 Y N N 18.462 -28.714 -31.292 6.208 1.313 -0.909 N1 9TC 14 9TC C3 C11 C 0 1 Y N N 18.954 -29.972 -31.188 5.881 0.166 -0.341 C3 9TC 15 9TC C5 C12 C 0 1 N N N 18.003 -31.059 -30.753 4.543 -0.464 -0.631 C5 9TC 16 9TC N4 N5 N 0 1 Y N N 16.688 -29.917 -27.482 1.901 -1.252 -0.706 N4 9TC 17 9TC C10 C13 C 0 1 N N N 19.101 -29.678 -24.575 -1.722 -1.615 -0.048 C10 9TC 18 9TC O1 O1 O 0 1 N N N 20.151 -30.237 -24.248 -1.981 -2.686 -0.562 O1 9TC 19 9TC N6 N6 N 0 1 N N N 18.440 -28.907 -23.626 -2.713 -0.848 0.447 N6 9TC 20 9TC C11 C14 C 0 1 N N N 18.986 -28.803 -22.256 -2.613 0.527 0.990 C11 9TC 21 9TC C12 C15 C 0 1 N N N 17.948 -27.969 -21.503 -3.882 1.243 0.477 C12 9TC 22 9TC C14 C16 C 0 1 N N N 17.399 -27.901 -23.875 -4.151 -1.189 0.570 C14 9TC 23 9TC C15 C17 C 0 1 N N N 18.079 -25.761 -22.702 -5.285 0.099 -1.267 C15 9TC 24 9TC O2 O2 O 0 1 N N N 16.042 -24.561 -23.210 -7.202 1.465 -0.722 O2 9TC 25 9TC C17 C18 C 0 1 N N N 15.265 -25.728 -23.176 -6.872 1.549 0.666 C17 9TC 26 9TC H6 H1 H 0 1 N N N 16.636 -29.819 -29.999 3.784 0.777 0.915 H6 9TC 27 9TC H3 H2 H 0 1 N N N 20.643 -31.292 -31.395 6.504 -1.401 0.975 H3 9TC 28 9TC H7 H3 H 0 1 N N N 16.487 -29.416 -25.469 0.405 -2.444 -1.540 H7 9TC 29 9TC H8 H4 H 0 1 N N N 20.415 -30.495 -26.699 -0.668 0.260 1.628 H8 9TC 30 9TC H21 H5 H 0 1 N N N 15.826 -26.337 -21.183 -6.776 -0.583 0.969 H21 9TC 31 9TC H22 H6 H 0 1 N N N 15.258 -27.673 -22.240 -5.818 0.368 2.130 H22 9TC 32 9TC H17 H7 H 0 1 N N N 17.339 -25.212 -24.651 -5.428 2.243 -1.441 H17 9TC 33 9TC H18 H8 H 0 1 N N N 17.902 -23.832 -23.648 -6.406 1.343 -2.625 H18 9TC 34 9TC H1 H9 H 0 1 N N N 21.331 -27.271 -32.335 9.232 1.686 0.402 H1 9TC 35 9TC H2 H10 H 0 1 N N N 18.997 -26.742 -31.773 7.650 2.801 -1.123 H2 9TC 36 9TC H5 H11 H 0 1 N N N 17.395 -31.359 -31.619 4.607 -1.541 -0.475 H5 9TC 37 9TC H4 H12 H 0 1 N N N 18.592 -31.919 -30.402 4.263 -0.263 -1.665 H4 9TC 38 9TC H10 H13 H 0 1 N N N 19.091 -29.799 -21.801 -2.602 0.506 2.079 H10 9TC 39 9TC H9 H14 H 0 1 N N N 19.963 -28.298 -22.262 -1.718 1.022 0.610 H9 9TC 40 9TC H11 H15 H 0 1 N N N 18.433 -27.357 -20.728 -3.667 1.787 -0.442 H11 9TC 41 9TC H12 H16 H 0 1 N N N 17.194 -28.620 -21.037 -4.269 1.921 1.238 H12 9TC 42 9TC H14 H17 H 0 1 N N N 17.682 -27.256 -24.720 -4.385 -1.486 1.593 H14 9TC 43 9TC H13 H18 H 0 1 N N N 16.438 -28.389 -24.093 -4.415 -1.984 -0.127 H13 9TC 44 9TC H15 H19 H 0 1 N N N 19.079 -25.974 -23.107 -4.388 0.058 -1.885 H15 9TC 45 9TC H16 H20 H 0 1 N N N 18.176 -25.301 -21.708 -5.907 -0.772 -1.469 H16 9TC 46 9TC H20 H21 H 0 1 N N N 14.245 -25.472 -22.855 -7.787 1.643 1.252 H20 9TC 47 9TC H19 H22 H 0 1 N N N 15.232 -26.168 -24.184 -6.239 2.420 0.837 H19 9TC 48 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9TC C1 N2 DOUB Y N 1 9TC C1 C2 SING Y N 2 9TC N2 C4 SING Y N 3 9TC C2 N1 DOUB Y N 4 9TC C4 C3 DOUB Y N 5 9TC N1 C3 SING Y N 6 9TC C3 C5 SING N N 7 9TC C5 N3 SING N N 8 9TC N3 C6 SING N N 9 9TC C6 N5 DOUB Y N 10 9TC C6 N4 SING Y N 11 9TC N5 C9 SING Y N 12 9TC N4 C7 DOUB Y N 13 9TC C9 C8 DOUB Y N 14 9TC C7 C8 SING Y N 15 9TC C8 C10 SING N N 16 9TC C10 O1 DOUB N N 17 9TC C10 N6 SING N N 18 9TC C14 N6 SING N N 19 9TC C14 C13 SING N N 20 9TC C16 O2 SING N N 21 9TC C16 C15 SING N N 22 9TC N6 C11 SING N N 23 9TC O2 C17 SING N N 24 9TC C17 C18 SING N N 25 9TC C15 C13 SING N N 26 9TC C13 C18 SING N N 27 9TC C13 C12 SING N N 28 9TC C11 C12 SING N N 29 9TC N3 H6 SING N N 30 9TC C4 H3 SING N N 31 9TC C7 H7 SING N N 32 9TC C9 H8 SING N N 33 9TC C18 H21 SING N N 34 9TC C18 H22 SING N N 35 9TC C16 H17 SING N N 36 9TC C16 H18 SING N N 37 9TC C1 H1 SING N N 38 9TC C2 H2 SING N N 39 9TC C5 H5 SING N N 40 9TC C5 H4 SING N N 41 9TC C11 H10 SING N N 42 9TC C11 H9 SING N N 43 9TC C12 H11 SING N N 44 9TC C12 H12 SING N N 45 9TC C14 H14 SING N N 46 9TC C14 H13 SING N N 47 9TC C15 H15 SING N N 48 9TC C15 H16 SING N N 49 9TC C17 H20 SING N N 50 9TC C17 H19 SING N N 51 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9TC SMILES ACDLabs 12.01 "O=C(N1CCC2(C1)CCOCC2)c1cnc(NCc2cnccn2)nc1" 9TC InChI InChI 1.03 "InChI=1S/C18H22N6O2/c25-16(24-6-1-18(13-24)2-7-26-8-3-18)14-9-21-17(22-10-14)23-12-15-11-19-4-5-20-15/h4-5,9-11H,1-3,6-8,12-13H2,(H,21,22,23)" 9TC InChIKey InChI 1.03 VGRLXWFIXGZRMS-UHFFFAOYSA-N 9TC SMILES_CANONICAL CACTVS 3.385 "O=C(N1CCC2(CCOCC2)C1)c3cnc(NCc4cnccn4)nc3" 9TC SMILES CACTVS 3.385 "O=C(N1CCC2(CCOCC2)C1)c3cnc(NCc4cnccn4)nc3" 9TC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnc(cn1)CNc2ncc(cn2)C(=O)N3CCC4(C3)CCOCC4" 9TC SMILES "OpenEye OEToolkits" 2.0.7 "c1cnc(cn1)CNc2ncc(cn2)C(=O)N3CCC4(C3)CCOCC4" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9TC "SYSTEMATIC NAME" ACDLabs 12.01 "(8-oxa-2-azaspiro[4.5]decan-2-yl)(2-{[(pyrazin-2-yl)methyl]amino}pyrimidin-5-yl)methanone" 9TC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "8-oxa-2-azaspiro[4.5]decan-2-yl-[2-(pyrazin-2-ylmethylamino)pyrimidin-5-yl]methanone" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9TC "Create component" 2021-10-26 RCSB 9TC "Initial release" 2022-01-12 RCSB ##