data_9VL # _chem_comp.id 9VL _chem_comp.name "(2S)-2-azanyl-6-[(2-bromophenyl)methoxycarbonylamino]hexanoic acid" _chem_comp.type "peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C14 H19 Br N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-08-16 _chem_comp.pdbx_modified_date 2019-04-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 359.216 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9VL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6ABL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9VL C15 C1 C 0 1 Y N N 197.260 37.397 74.755 3.678 -0.836 0.051 C15 9VL 1 9VL C20 C2 C 0 1 Y N N 197.878 38.833 72.936 4.390 -3.116 0.217 C20 9VL 2 9VL C21 C3 C 0 1 Y N N 197.654 37.567 73.448 3.374 -2.181 0.147 C21 9VL 3 9VL C C4 C 0 1 N N N 191.312 37.424 82.069 -8.457 -0.332 -0.177 C 9VL 4 9VL CA C5 C 0 1 N N S 191.207 35.925 81.717 -7.232 0.543 -0.106 CA 9VL 5 9VL CB C6 C 0 1 N N N 191.378 35.568 80.226 -5.981 -0.335 -0.038 CB 9VL 6 9VL CG C7 C 0 1 N N N 192.870 35.511 79.869 -4.734 0.549 -0.092 CG 9VL 7 9VL CD C8 C 0 1 N N N 193.233 35.111 78.447 -3.483 -0.330 -0.025 CD 9VL 8 9VL CE C9 C 0 1 N N N 194.636 35.612 78.099 -2.235 0.554 -0.079 CE 9VL 9 9VL C11 C10 C 0 1 N N N 196.852 34.659 77.337 0.185 0.279 -0.046 C11 9VL 10 9VL C14 C11 C 0 1 N N N 197.030 35.970 75.223 2.570 0.183 -0.026 C14 9VL 11 9VL C16 C12 C 0 1 Y N N 197.085 38.554 75.528 4.998 -0.425 0.030 C16 9VL 12 9VL C18 C13 C 0 1 Y N N 197.306 39.819 75.011 6.015 -1.361 0.100 C18 9VL 13 9VL C19 C14 C 0 1 Y N N 197.704 39.964 73.706 5.710 -2.706 0.191 C19 9VL 14 9VL N N1 N 0 1 N N N 189.889 35.473 82.199 -7.303 1.388 1.094 N 9VL 15 9VL NZ N2 N 0 1 N N N 195.710 34.627 78.304 -1.038 -0.287 -0.014 NZ 9VL 16 9VL O O1 O 0 1 N N N 190.565 38.347 81.396 -9.111 -0.538 0.818 O 9VL 17 9VL OXT O2 O 0 1 N Y N 192.123 37.845 83.089 -8.822 -0.883 -1.345 OXT 9VL 18 9VL O12 O3 O 0 1 N N N 197.516 33.659 77.120 0.294 1.486 -0.128 O12 9VL 19 9VL O13 O4 O 0 1 N N N 197.264 35.841 76.623 1.286 -0.494 0.014 O13 9VL 20 9VL BR BR1 BR 0 0 N N N 196.535 38.553 77.357 5.414 1.415 -0.095 BR 9VL 21 9VL H20 H1 H 0 1 N N N 198.197 38.938 71.909 4.153 -4.167 0.293 H20 9VL 22 9VL H21 H2 H 0 1 N N N 197.790 36.703 72.814 2.343 -2.502 0.168 H21 9VL 23 9VL HA H3 H 0 1 N N N 191.988 35.393 82.281 -7.185 1.175 -0.993 HA 9VL 24 9VL HB2 H4 H 0 1 N N N 190.885 36.333 79.609 -5.985 -0.902 0.893 HB2 9VL 25 9VL HB3 H5 H 0 1 N N N 190.919 34.588 80.031 -5.975 -1.024 -0.883 HB3 9VL 26 9VL HG2 H6 H 0 1 N N N 193.344 34.786 80.547 -4.730 1.115 -1.023 HG2 9VL 27 9VL HG3 H7 H 0 1 N N N 193.291 36.511 80.048 -4.740 1.237 0.752 HG3 9VL 28 9VL HD2 H8 H 0 1 N N N 192.506 35.552 77.749 -3.487 -0.896 0.906 HD2 9VL 29 9VL HD3 H9 H 0 1 N N N 193.207 34.015 78.360 -3.477 -1.019 -0.869 HD3 9VL 30 9VL HE2 H10 H 0 1 N N N 194.852 36.489 78.726 -2.232 1.121 -1.010 HE2 9VL 31 9VL HE3 H11 H 0 1 N N N 194.641 35.908 77.040 -2.242 1.243 0.766 HE3 9VL 32 9VL H12 H12 H 0 1 N N N 195.990 35.685 75.006 2.646 0.866 0.820 H12 9VL 33 9VL H13 H13 H 0 1 N N N 197.715 35.300 74.682 2.656 0.744 -0.956 H13 9VL 34 9VL H18 H14 H 0 1 N N N 197.165 40.690 75.634 7.046 -1.040 0.083 H18 9VL 35 9VL H19 H15 H 0 1 N N N 197.878 40.945 73.290 6.504 -3.437 0.245 H19 9VL 36 9VL H H16 H 0 1 N N N 189.788 35.709 83.166 -7.347 0.825 1.930 H 9VL 37 9VL H2 H17 H 0 1 N Y N 189.169 35.921 81.670 -6.525 2.029 1.130 H2 9VL 38 9VL HZ H19 H 0 1 N N N 195.678 33.967 79.055 -1.125 -1.251 0.052 HZ 9VL 39 9VL HXT H20 H 0 1 N Y N 192.044 38.786 83.189 -9.615 -1.436 -1.341 HXT 9VL 40 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9VL C20 C21 DOUB Y N 1 9VL C20 C19 SING Y N 2 9VL C21 C15 SING Y N 3 9VL C19 C18 DOUB Y N 4 9VL C15 C14 SING N N 5 9VL C15 C16 DOUB Y N 6 9VL C18 C16 SING Y N 7 9VL C14 O13 SING N N 8 9VL C16 BR SING N N 9 9VL O13 C11 SING N N 10 9VL O12 C11 DOUB N N 11 9VL C11 NZ SING N N 12 9VL CE NZ SING N N 13 9VL CE CD SING N N 14 9VL CD CG SING N N 15 9VL CG CB SING N N 16 9VL CB CA SING N N 17 9VL O C DOUB N N 18 9VL CA C SING N N 19 9VL CA N SING N N 20 9VL C OXT SING N N 21 9VL C20 H20 SING N N 22 9VL C21 H21 SING N N 23 9VL CA HA SING N N 24 9VL CB HB2 SING N N 25 9VL CB HB3 SING N N 26 9VL CG HG2 SING N N 27 9VL CG HG3 SING N N 28 9VL CD HD2 SING N N 29 9VL CD HD3 SING N N 30 9VL CE HE2 SING N N 31 9VL CE HE3 SING N N 32 9VL C14 H12 SING N N 33 9VL C14 H13 SING N N 34 9VL C18 H18 SING N N 35 9VL C19 H19 SING N N 36 9VL N H SING N N 37 9VL N H2 SING N N 38 9VL NZ HZ SING N N 39 9VL OXT HXT SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9VL InChI InChI 1.03 "InChI=1S/C14H19BrN2O4/c15-11-6-2-1-5-10(11)9-21-14(20)17-8-4-3-7-12(16)13(18)19/h1-2,5-6,12H,3-4,7-9,16H2,(H,17,20)(H,18,19)/t12-/m0/s1" 9VL InChIKey InChI 1.03 YGZWYMNBUCDJRQ-LBPRGKRZSA-N 9VL SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCCCNC(=O)OCc1ccccc1Br)C(O)=O" 9VL SMILES CACTVS 3.385 "N[CH](CCCCNC(=O)OCc1ccccc1Br)C(O)=O" 9VL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)COC(=O)NCCCC[C@@H](C(=O)O)N)Br" 9VL SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(c(c1)COC(=O)NCCCCC(C(=O)O)N)Br" # _pdbx_chem_comp_identifier.comp_id 9VL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-6-[(2-bromophenyl)methoxycarbonylamino]hexanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9VL "Create component" 2018-08-16 PDBJ 9VL "Initial release" 2019-04-17 RCSB ##