data_9XS # _chem_comp.id 9XS _chem_comp.name "(2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-3-methyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H27 N3 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-11-22 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 493.530 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9XS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7O0O _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9XS C11 C1 C 0 1 Y N N -16.623 16.133 8.297 8.108 1.431 0.682 C11 9XS 1 9XS C18 C2 C 0 1 N N S -19.270 25.025 -1.358 -4.564 0.701 0.949 C18 9XS 2 9XS C17 C3 C 0 1 N N N -21.681 26.170 1.448 -2.942 -0.581 -2.137 C17 9XS 3 9XS C6 C4 C 0 1 N N S -19.184 20.027 2.745 2.204 -0.188 -1.401 C6 9XS 4 9XS O6 O1 O 0 1 N N N -21.062 27.597 -1.580 -6.160 -1.201 -0.290 O6 9XS 5 9XS C5 C5 C 0 1 N N N -21.015 21.713 2.433 0.474 -1.542 -0.440 C5 9XS 6 9XS O5 O2 O 0 1 N N N -22.632 26.523 0.653 -1.953 -1.266 -2.304 O5 9XS 7 9XS C16 C6 C 0 1 N N N -20.525 25.543 0.575 -3.366 -0.215 -0.765 C16 9XS 8 9XS C4 C7 C 0 1 N N S -19.770 22.402 1.863 -0.097 -0.117 -0.647 C4 9XS 9 9XS O4 O3 O 0 1 N N N -21.676 26.258 2.695 -3.652 -0.155 -3.198 O4 9XS 10 9XS C3 C8 C 0 1 N N S -19.164 25.369 1.106 -2.644 -0.638 0.495 C3 9XS 11 9XS C2 C9 C 0 1 N N R -18.462 24.577 -0.112 -3.675 -0.372 1.619 C2 9XS 12 9XS C15 C10 C 0 1 N N N -18.612 21.382 2.098 1.198 0.737 -0.684 C15 9XS 13 9XS C1 C11 C 0 1 N N N -16.950 24.952 -0.235 -4.479 -1.634 1.940 C1 9XS 14 9XS C12 C12 C 0 1 Y N N -18.025 16.441 8.318 7.559 0.156 0.526 C12 9XS 15 9XS C19 C13 C 0 1 N N S -18.914 26.356 -2.091 -6.029 0.496 1.338 C19 9XS 16 9XS C10 C14 C 0 1 Y N N -15.827 16.507 7.175 7.412 2.540 0.244 C10 9XS 17 9XS C21 C15 C 0 1 N N R -19.051 26.262 -3.544 -6.877 1.624 0.746 C21 9XS 18 9XS C22 C16 C 0 1 N N N -18.562 27.558 -4.248 -6.389 2.968 1.289 C22 9XS 19 9XS C20 C17 C 0 1 N N N -19.765 27.546 -1.501 -6.511 -0.828 0.804 C20 9XS 20 9XS C7 C18 C 0 1 N N N -18.223 19.329 3.974 3.566 -0.048 -0.772 C7 9XS 21 9XS C8 C19 C 0 1 Y N N -17.814 17.528 6.031 5.617 1.130 -0.508 C8 9XS 22 9XS C9 C20 C 0 1 Y N N -16.409 17.191 6.055 6.172 2.394 -0.349 C9 9XS 23 9XS C13 C21 C 0 1 N N N -19.037 16.050 9.553 8.298 -1.032 1.000 C13 9XS 24 9XS C14 C22 C 0 1 Y N N -18.541 17.113 7.184 6.310 0.009 -0.077 C14 9XS 25 9XS O7 O4 O 0 1 N N N -18.995 28.296 -0.886 -7.329 -1.593 1.544 O7 9XS 26 9XS S1 S1 S 0 1 N N N -19.242 24.253 2.581 -1.155 0.368 0.745 S1 9XS 27 9XS N1 N1 N 0 1 N N N -20.604 20.454 3.163 1.717 -1.570 -1.240 N1 9XS 28 9XS O1 O5 O 0 1 N N N -17.105 19.811 4.054 3.948 -0.867 0.037 O1 9XS 29 9XS N2 N2 N 0 1 N N N -18.566 18.229 4.896 4.361 0.987 -1.108 N2 9XS 30 9XS O2 O6 O 0 1 N N N -19.886 15.144 9.326 7.819 -2.139 0.864 O2 9XS 31 9XS O3 O7 O 0 1 N N N -18.952 16.678 10.633 9.504 -0.886 1.583 O3 9XS 32 9XS N3 N3 N 0 1 N N N -20.627 25.320 -0.706 -4.387 0.497 -0.493 N3 9XS 33 9XS O8 O8 O 0 1 N N N -18.328 25.069 -3.950 -6.757 1.612 -0.678 O8 9XS 34 9XS H1 H1 H 0 1 N N N -16.171 15.618 9.132 9.074 1.550 1.149 H1 9XS 35 9XS H2 H2 H 0 1 N N N -19.355 24.200 -2.080 -4.232 1.699 1.234 H2 9XS 36 9XS H3 H3 H 0 1 N N N -19.264 19.279 1.943 2.256 0.066 -2.459 H3 9XS 37 9XS H6 H4 H 0 1 N N N -21.523 22.393 3.132 0.697 -1.712 0.613 H6 9XS 38 9XS H5 H5 H 0 1 N N N -21.699 21.454 1.612 -0.229 -2.291 -0.804 H5 9XS 39 9XS H7 H7 H 0 1 N N N -19.900 22.556 0.782 -0.639 -0.046 -1.590 H7 9XS 40 9XS H8 H8 H 0 1 N N N -22.497 26.634 2.990 -3.336 -0.419 -4.073 H8 9XS 41 9XS H24 H9 H 0 1 N N N -18.640 26.300 1.370 -2.386 -1.697 0.451 H24 9XS 42 9XS H9 H10 H 0 1 N N N -18.572 23.494 0.044 -3.190 0.021 2.513 H9 9XS 43 9XS H10 H11 H 0 1 N N N -18.132 21.150 1.136 1.537 0.967 0.326 H10 9XS 44 9XS H11 H12 H 0 1 N N N -17.871 21.825 2.780 1.040 1.652 -1.256 H11 9XS 45 9XS H12 H13 H 0 1 N N N -16.414 24.618 0.666 -4.884 -2.051 1.018 H12 9XS 46 9XS H14 H14 H 0 1 N N N -16.521 24.460 -1.120 -3.829 -2.368 2.416 H14 9XS 47 9XS H13 H15 H 0 1 N N N -16.850 26.043 -0.338 -5.297 -1.381 2.615 H13 9XS 48 9XS H15 H16 H 0 1 N N N -17.861 26.576 -1.861 -6.121 0.505 2.424 H15 9XS 49 9XS H16 H17 H 0 1 N N N -14.773 16.273 7.167 7.838 3.525 0.365 H16 9XS 50 9XS H17 H18 H 0 1 N N N -20.115 26.133 -3.790 -7.921 1.478 1.024 H17 9XS 51 9XS H19 H19 H 0 1 N N N -19.153 28.415 -3.892 -6.992 3.771 0.867 H19 9XS 52 9XS H20 H20 H 0 1 N N N -17.500 27.723 -4.015 -6.480 2.977 2.375 H20 9XS 53 9XS H18 H21 H 0 1 N N N -18.687 27.454 -5.336 -5.345 3.114 1.011 H18 9XS 54 9XS H21 H22 H 0 1 N N N -15.785 17.459 5.215 5.630 3.265 -0.684 H21 9XS 55 9XS H22 H23 H 0 1 N N N -19.598 17.335 7.194 5.881 -0.974 -0.201 H22 9XS 56 9XS H26 H24 H 0 1 N N N -19.496 28.969 -0.441 -7.611 -2.434 1.158 H26 9XS 57 9XS H23 H25 H 0 1 N N N -20.620 20.625 4.148 2.416 -2.151 -0.802 H23 9XS 58 9XS H25 H27 H 0 1 N N N -19.485 17.864 4.748 4.062 1.634 -1.767 H25 9XS 59 9XS H29 H28 H 0 1 N N N -19.617 16.365 11.235 9.950 -1.693 1.877 H29 9XS 60 9XS H28 H31 H 0 1 N N N -18.673 24.316 -3.486 -7.269 2.302 -1.121 H28 9XS 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9XS C22 C21 SING N N 1 9XS O8 C21 SING N N 2 9XS C21 C19 SING N N 3 9XS C19 C20 SING N N 4 9XS C19 C18 SING N N 5 9XS O6 C20 DOUB N N 6 9XS C20 O7 SING N N 7 9XS C18 N3 SING N N 8 9XS C18 C2 SING N N 9 9XS N3 C16 DOUB N N 10 9XS C1 C2 SING N N 11 9XS C2 C3 SING N N 12 9XS C16 C3 SING N N 13 9XS C16 C17 SING N N 14 9XS O5 C17 DOUB N N 15 9XS C3 S1 SING N N 16 9XS C17 O4 SING N N 17 9XS C4 C15 SING N N 18 9XS C4 C5 SING N N 19 9XS C4 S1 SING N N 20 9XS C15 C6 SING N N 21 9XS C5 N1 SING N N 22 9XS C6 N1 SING N N 23 9XS C6 C7 SING N N 24 9XS C7 O1 DOUB N N 25 9XS C7 N2 SING N N 26 9XS N2 C8 SING N N 27 9XS C8 C9 DOUB Y N 28 9XS C8 C14 SING Y N 29 9XS C9 C10 SING Y N 30 9XS C10 C11 DOUB Y N 31 9XS C14 C12 DOUB Y N 32 9XS C11 C12 SING Y N 33 9XS C12 C13 SING N N 34 9XS O2 C13 DOUB N N 35 9XS C13 O3 SING N N 36 9XS C11 H1 SING N N 37 9XS C18 H2 SING N N 38 9XS C6 H3 SING N N 39 9XS C5 H6 SING N N 40 9XS C5 H5 SING N N 41 9XS C4 H7 SING N N 42 9XS O4 H8 SING N N 43 9XS C3 H24 SING N N 44 9XS C2 H9 SING N N 45 9XS C15 H10 SING N N 46 9XS C15 H11 SING N N 47 9XS C1 H12 SING N N 48 9XS C1 H14 SING N N 49 9XS C1 H13 SING N N 50 9XS C19 H15 SING N N 51 9XS C10 H16 SING N N 52 9XS C21 H17 SING N N 53 9XS C22 H19 SING N N 54 9XS C22 H20 SING N N 55 9XS C22 H18 SING N N 56 9XS C9 H21 SING N N 57 9XS C14 H22 SING N N 58 9XS O7 H26 SING N N 59 9XS N1 H23 SING N N 60 9XS N2 H25 SING N N 61 9XS O3 H29 SING N N 62 9XS O8 H28 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9XS InChI InChI 1.06 "InChI=1S/C22H27N3O8S/c1-9-16(15(10(2)26)21(30)31)25-17(22(32)33)18(9)34-13-7-14(23-8-13)19(27)24-12-5-3-4-11(6-12)20(28)29/h3-6,9-10,13-16,18,23,26H,7-8H2,1-2H3,(H,24,27)(H,28,29)(H,30,31)(H,32,33)/t9-,10-,13+,14+,15-,16-,18+/m1/s1" 9XS InChIKey InChI 1.06 MLCVCXYVRPDWBV-UIRAGYLNSA-N 9XS SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O)[C@H]([C@@H]1N=C([C@@H](S[C@@H]2CN[C@@H](C2)C(=O)Nc3cccc(c3)C(O)=O)[C@@H]1C)C(O)=O)C(O)=O" 9XS SMILES CACTVS 3.385 "C[CH](O)[CH]([CH]1N=C([CH](S[CH]2CN[CH](C2)C(=O)Nc3cccc(c3)C(O)=O)[CH]1C)C(O)=O)C(O)=O" 9XS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1[C@@H](C(=N[C@H]1[C@@H]([C@@H](C)O)C(=O)O)C(=O)O)S[C@H]2C[C@H](NC2)C(=O)Nc3cccc(c3)C(=O)O" 9XS SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(C(=NC1C(C(C)O)C(=O)O)C(=O)O)SC2CC(NC2)C(=O)Nc3cccc(c3)C(=O)O" # _pdbx_chem_comp_identifier.comp_id 9XS _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-3-methyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9XS "Create component" 2021-11-22 PDBE 9XS "Initial release" 2021-12-01 RCSB 9XS "Modify descriptor" 2022-08-22 RCSB #