data_9YH # _chem_comp.id 9YH _chem_comp.name "2-[2-[2-hydroxy-2-oxoethyl-[(3-methoxy-2-oxidanyl-phenyl)methyl]amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H28 N2 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-08-02 _chem_comp.pdbx_modified_date 2017-12-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 448.533 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9YH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5ON0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9YH CBC C1 C 0 1 N N N 3.568 1.242 35.178 7.874 1.217 0.605 CBC 9YH 1 9YH OAX O1 O 0 1 N N N 3.117 -0.091 34.892 6.767 0.341 0.381 OAX 9YH 2 9YH CAR C2 C 0 1 Y N N 3.872 -0.732 33.953 5.653 0.885 -0.178 CAR 9YH 3 9YH CAS C3 C 0 1 Y N N 3.392 -1.953 33.516 4.538 0.090 -0.425 CAS 9YH 4 9YH OAY O2 O 0 1 N N N 2.222 -2.397 34.044 4.560 -1.232 -0.107 OAY 9YH 5 9YH CAQ C4 C 0 1 Y N N 5.065 -0.240 33.441 5.624 2.232 -0.498 CAQ 9YH 6 9YH CAE C5 C 0 1 Y N N 5.749 -0.992 32.490 4.490 2.784 -1.066 CAE 9YH 7 9YH CAF C6 C 0 1 Y N N 5.252 -2.221 32.052 3.385 1.993 -1.316 CAF 9YH 8 9YH CAG C7 C 0 1 Y N N 4.061 -2.717 32.567 3.405 0.648 -0.995 CAG 9YH 9 9YH CAH C8 C 0 1 N N N 3.567 -3.939 32.120 2.198 -0.211 -1.269 CAH 9YH 10 9YH N N1 N 0 1 N N N 3.386 -4.906 33.207 1.337 -0.240 -0.079 N 9YH 11 9YH CA C9 C 0 1 N N N 4.686 -5.165 33.849 1.925 -1.078 0.975 CA 9YH 12 9YH C C10 C 0 1 N N N 4.482 -5.419 35.348 2.030 -2.500 0.487 C 9YH 13 9YH OXT O3 O 0 1 N N N 5.418 -5.971 35.965 2.457 -3.465 1.317 OXT 9YH 14 9YH O O4 O 0 1 N N N 3.399 -5.038 35.845 1.729 -2.772 -0.651 O 9YH 15 9YH CAJ C11 C 0 1 N N N 2.875 -6.152 32.608 -0.017 -0.696 -0.420 CAJ 9YH 16 9YH CAK C12 C 0 1 N N N 2.155 -7.034 33.639 -0.976 -0.341 0.718 CAK 9YH 17 9YH NAL N2 N 0 1 N N N 1.016 -6.355 34.298 -2.313 -0.867 0.414 NAL 9YH 18 9YH CAT C13 C 0 1 N N N -0.201 -6.374 33.467 -2.311 -2.336 0.404 CAT 9YH 19 9YH CAZ C14 C 0 1 N N N -0.286 -5.121 32.581 -3.561 -2.836 -0.273 CAZ 9YH 20 9YH OBD O5 O 0 1 N N N 0.296 -4.087 32.978 -3.830 -4.151 -0.299 OBD 9YH 21 9YH OBA O6 O 0 1 N N N -0.934 -5.228 31.517 -4.321 -2.054 -0.792 OBA 9YH 22 9YH CAM C15 C 0 1 N N N 0.740 -6.840 35.674 -3.311 -0.348 1.359 CAM 9YH 23 9YH CAN C16 C 0 1 Y N N 0.065 -8.080 35.794 -3.421 1.147 1.203 CAN 9YH 24 9YH CAO C17 C 0 1 Y N N 0.698 -9.285 35.491 -2.799 1.984 2.108 CAO 9YH 25 9YH CAP C18 C 0 1 Y N N 0.037 -10.503 35.624 -2.899 3.355 1.966 CAP 9YH 26 9YH CAW C19 C 0 1 Y N N -1.271 -10.533 36.085 -3.621 3.894 0.916 CAW 9YH 27 9YH CAV C20 C 0 1 Y N N -1.910 -9.342 36.405 -4.246 3.064 0.007 CAV 9YH 28 9YH CAU C21 C 0 1 Y N N -1.246 -8.125 36.266 -4.142 1.684 0.144 CAU 9YH 29 9YH SBB S1 S 0 1 N N N -2.095 -6.644 36.685 -4.932 0.621 -1.018 SBB 9YH 30 9YH CBE C22 C 0 1 N N N -3.550 -6.839 35.680 -5.717 1.783 -2.168 CBE 9YH 31 9YH H1 H1 H 0 1 N N N 2.916 1.695 35.939 8.200 1.641 -0.344 H1 9YH 32 9YH H2 H2 H 0 1 N N N 4.601 1.207 35.554 7.571 2.020 1.277 H2 9YH 33 9YH H3 H3 H 0 1 N N N 3.533 1.846 34.259 8.695 0.658 1.054 H3 9YH 34 9YH H4 H4 H 0 1 N N N 1.897 -1.763 34.672 4.349 -1.418 0.818 H4 9YH 35 9YH H5 H5 H 0 1 N N N 5.456 0.710 33.775 6.486 2.852 -0.303 H5 9YH 36 9YH H6 H6 H 0 1 N N N 6.678 -0.619 32.085 4.469 3.834 -1.315 H6 9YH 37 9YH H7 H7 H 0 1 N N N 5.795 -2.788 31.310 2.501 2.427 -1.760 H7 9YH 38 9YH H8 H8 H 0 1 N N N 2.595 -3.769 31.634 1.641 0.203 -2.110 H8 9YH 39 9YH H9 H9 H 0 1 N N N 4.274 -4.359 31.389 2.520 -1.224 -1.510 H9 9YH 40 9YH H11 H11 H 0 1 N N N 5.151 -6.049 33.389 2.919 -0.705 1.224 H11 9YH 41 9YH H12 H12 H 0 1 N N N 5.342 -4.292 33.712 1.292 -1.044 1.862 H12 9YH 42 9YH H13 H13 H 0 1 N N N 5.184 -6.061 36.881 2.507 -4.361 0.959 H13 9YH 43 9YH H14 H14 H 0 1 N N N 2.168 -5.896 31.805 -0.345 -0.208 -1.337 H14 9YH 44 9YH H15 H15 H 0 1 N N N 3.720 -6.716 32.187 -0.011 -1.776 -0.566 H15 9YH 45 9YH H16 H16 H 0 1 N N N 1.778 -7.932 33.127 -0.616 -0.781 1.648 H16 9YH 46 9YH H17 H17 H 0 1 N N N 2.880 -7.330 34.412 -1.028 0.743 0.825 H17 9YH 47 9YH H19 H19 H 0 1 N N N -1.083 -6.411 34.123 -1.436 -2.695 -0.138 H19 9YH 48 9YH H20 H20 H 0 1 N N N -0.184 -7.267 32.825 -2.281 -2.706 1.429 H20 9YH 49 9YH H21 H21 H 0 1 N N N 0.171 -3.390 32.345 -4.644 -4.424 -0.745 H21 9YH 50 9YH H22 H22 H 0 1 N N N 1.705 -6.936 36.192 -4.279 -0.807 1.154 H22 9YH 51 9YH H23 H23 H 0 1 N N N 0.127 -6.078 36.178 -3.005 -0.586 2.377 H23 9YH 52 9YH H24 H24 H 0 1 N N N 1.721 -9.273 35.146 -2.235 1.566 2.929 H24 9YH 53 9YH H25 H25 H 0 1 N N N 0.542 -11.423 35.369 -2.411 4.008 2.675 H25 9YH 54 9YH H26 H26 H 0 1 N N N -1.788 -11.475 36.194 -3.697 4.966 0.808 H26 9YH 55 9YH H27 H27 H 0 1 N N N -2.928 -9.359 36.764 -4.810 3.486 -0.811 H27 9YH 56 9YH H28 H28 H 0 1 N N N -4.214 -5.974 35.823 -6.425 2.409 -1.625 H28 9YH 57 9YH H29 H29 H 0 1 N N N -3.258 -6.906 34.622 -4.954 2.412 -2.626 H29 9YH 58 9YH H30 H30 H 0 1 N N N -4.078 -7.758 35.974 -6.244 1.227 -2.943 H30 9YH 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9YH OBA CAZ DOUB N N 1 9YH CAF CAE DOUB Y N 2 9YH CAF CAG SING Y N 3 9YH CAH CAG SING N N 4 9YH CAH N SING N N 5 9YH CAE CAQ SING Y N 6 9YH CAG CAS DOUB Y N 7 9YH CAZ OBD SING N N 8 9YH CAZ CAT SING N N 9 9YH CAJ N SING N N 10 9YH CAJ CAK SING N N 11 9YH N CA SING N N 12 9YH CAQ CAR DOUB Y N 13 9YH CAT NAL SING N N 14 9YH CAS CAR SING Y N 15 9YH CAS OAY SING N N 16 9YH CAK NAL SING N N 17 9YH CA C SING N N 18 9YH CAR OAX SING N N 19 9YH NAL CAM SING N N 20 9YH OAX CBC SING N N 21 9YH C O DOUB N N 22 9YH C OXT SING N N 23 9YH CAO CAP DOUB Y N 24 9YH CAO CAN SING Y N 25 9YH CAP CAW SING Y N 26 9YH CAM CAN SING N N 27 9YH CBE SBB SING N N 28 9YH CAN CAU DOUB Y N 29 9YH CAW CAV DOUB Y N 30 9YH CAU CAV SING Y N 31 9YH CAU SBB SING N N 32 9YH CBC H1 SING N N 33 9YH CBC H2 SING N N 34 9YH CBC H3 SING N N 35 9YH OAY H4 SING N N 36 9YH CAQ H5 SING N N 37 9YH CAE H6 SING N N 38 9YH CAF H7 SING N N 39 9YH CAH H8 SING N N 40 9YH CAH H9 SING N N 41 9YH CA H11 SING N N 42 9YH CA H12 SING N N 43 9YH OXT H13 SING N N 44 9YH CAJ H14 SING N N 45 9YH CAJ H15 SING N N 46 9YH CAK H16 SING N N 47 9YH CAK H17 SING N N 48 9YH CAT H19 SING N N 49 9YH CAT H20 SING N N 50 9YH OBD H21 SING N N 51 9YH CAM H22 SING N N 52 9YH CAM H23 SING N N 53 9YH CAO H24 SING N N 54 9YH CAP H25 SING N N 55 9YH CAW H26 SING N N 56 9YH CAV H27 SING N N 57 9YH CBE H28 SING N N 58 9YH CBE H29 SING N N 59 9YH CBE H30 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9YH InChI InChI 1.03 "InChI=1S/C22H28N2O6S/c1-30-18-8-5-7-17(22(18)29)13-24(15-21(27)28)11-10-23(14-20(25)26)12-16-6-3-4-9-19(16)31-2/h3-9,29H,10-15H2,1-2H3,(H,25,26)(H,27,28)" 9YH InChIKey InChI 1.03 WFZIZUYYKZMMKQ-UHFFFAOYSA-N 9YH SMILES_CANONICAL CACTVS 3.385 "COc1cccc(CN(CCN(CC(O)=O)Cc2ccccc2SC)CC(O)=O)c1O" 9YH SMILES CACTVS 3.385 "COc1cccc(CN(CCN(CC(O)=O)Cc2ccccc2SC)CC(O)=O)c1O" 9YH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "COc1cccc(c1O)CN(CCN(Cc2ccccc2SC)CC(=O)O)CC(=O)O" 9YH SMILES "OpenEye OEToolkits" 2.0.6 "COc1cccc(c1O)CN(CCN(Cc2ccccc2SC)CC(=O)O)CC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9YH "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[2-[2-hydroxy-2-oxoethyl-[(3-methoxy-2-oxidanyl-phenyl)methyl]amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9YH "Create component" 2017-08-02 EBI 9YH "Initial release" 2017-12-13 RCSB #