data_9Z1 # _chem_comp.id 9Z1 _chem_comp.name "(3E,7aR,12aS)-6-hydroxy-3-[(1H-imidazol-4-yl)methylidene]-12-methoxy-7a-(2-methylbut-3-en-2-yl)-7a,12-dihydro-1H,5H-imidazo[1',2':1,2]pyrido[2,3-b]indole-2,5(3H)-dione" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H23 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Meleagrin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-06-27 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 433.460 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 9Z1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5W7S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9Z1 C11 C1 C 0 1 N N N 16.703 137.699 27.948 0.402 0.758 2.682 C11 9Z1 1 9Z1 C10 C2 C 0 1 N N N 18.961 138.589 30.713 0.415 3.193 1.539 C10 9Z1 2 9Z1 C12 C3 C 0 1 N N N 19.101 137.210 28.062 2.887 1.022 2.688 C12 9Z1 3 9Z1 C16 C4 C 0 1 N N N 18.866 132.475 32.558 0.190 -2.304 -2.727 C16 9Z1 4 9Z1 C1 C5 C 0 1 Y N N 17.401 135.200 31.903 2.279 0.156 -1.611 C1 9Z1 5 9Z1 C13 C6 C 0 1 N N S 18.671 135.066 29.962 0.471 0.051 -0.196 C13 9Z1 6 9Z1 C18 C7 C 0 1 N N N 17.969 133.560 28.134 -0.239 -2.064 0.895 C18 9Z1 7 9Z1 C2 C8 C 0 1 Y N N 17.063 135.119 33.250 3.047 0.387 -2.752 C2 9Z1 8 9Z1 C20 C9 C 0 1 N N N 16.618 134.181 28.230 1.178 -2.287 1.264 C20 9Z1 9 9Z1 C22 C10 C 0 1 N N N 16.401 135.314 28.933 2.061 -1.305 1.167 C22 9Z1 10 9Z1 C23 C11 C 0 1 N N N 20.289 133.703 29.085 -1.764 -0.257 0.147 C23 9Z1 11 9Z1 C24 C12 C 0 1 N N N 20.981 132.651 28.280 -2.978 -0.852 0.242 C24 9Z1 12 9Z1 C25 C13 C 0 1 Y N N 22.419 132.282 28.436 -4.188 -0.117 -0.149 C25 9Z1 13 9Z1 C26 C14 C 0 1 Y N N 22.806 130.963 28.522 -5.460 -0.617 -0.186 C26 9Z1 14 9Z1 C28 C15 C 0 1 Y N N 24.539 132.338 28.662 -5.484 1.488 -0.810 C28 9Z1 15 9Z1 C3 C16 C 0 1 Y N N 16.247 136.104 33.789 4.312 0.923 -2.565 C3 9Z1 16 9Z1 C30 C17 C 0 1 N N N 20.815 134.541 30.079 -1.510 1.155 -0.170 C30 9Z1 17 9Z1 C4 C18 C 0 1 Y N N 15.801 137.145 32.982 4.802 1.220 -1.310 C4 9Z1 18 9Z1 C5 C19 C 0 1 Y N N 16.141 137.206 31.633 4.047 0.993 -0.164 C5 9Z1 19 9Z1 C6 C20 C 0 1 Y N N 16.969 136.223 31.102 2.790 0.458 -0.342 C6 9Z1 20 9Z1 C7 C21 C 0 1 N N R 17.497 136.058 29.686 1.735 0.085 0.679 C7 9Z1 21 9Z1 C8 C22 C 0 1 N N N 17.841 137.362 28.907 1.625 1.092 1.826 C8 9Z1 22 9Z1 C9 C23 C 0 1 N N N 18.061 138.594 29.750 1.479 2.482 1.261 C9 9Z1 23 9Z1 N14 N1 N 0 1 N N N 18.192 134.334 31.137 0.988 -0.358 -1.518 N14 9Z1 24 9Z1 N17 N2 N 0 1 N N N 18.980 134.034 28.955 -0.524 -0.874 0.332 N17 9Z1 25 9Z1 N27 N3 N 0 1 Y N N 24.153 131.032 28.660 -6.268 0.398 -0.602 N27 9Z1 26 9Z1 N29 N4 N 0 1 Y N N 23.452 133.138 28.524 -4.248 1.183 -0.536 N29 9Z1 27 9Z1 N32 N5 N 0 1 N N N 19.943 135.431 30.602 -0.180 1.354 -0.299 N32 9Z1 28 9Z1 O15 O1 O 0 1 N N N 18.427 133.088 31.337 0.993 -1.815 -1.650 O15 9Z1 29 9Z1 O19 O2 O 0 1 N N N 18.184 132.693 27.297 -1.095 -2.906 1.088 O19 9Z1 30 9Z1 O21 O3 O 0 1 N N N 15.562 133.648 27.607 1.575 -3.510 1.706 O21 9Z1 31 9Z1 O31 O4 O 0 1 N N N 22.041 134.513 30.469 -2.365 2.012 -0.298 O31 9Z1 32 9Z1 H1 H1 H 0 1 N N N 15.768 137.819 28.515 0.371 1.423 3.546 H1 9Z1 33 9Z1 H2 H2 H 0 1 N N N 16.934 138.636 27.420 -0.503 0.890 2.089 H2 9Z1 34 9Z1 H3 H3 H 0 1 N N N 16.587 136.885 27.217 0.467 -0.276 3.021 H3 9Z1 35 9Z1 H4 H4 H 0 1 N N N 19.545 137.700 30.902 -0.358 2.784 2.173 H4 9Z1 36 9Z1 H5 H5 H 0 1 N N N 19.114 139.474 31.313 0.311 4.189 1.135 H5 9Z1 37 9Z1 H6 H6 H 0 1 N N N 19.953 136.965 28.714 3.182 -0.020 2.817 H6 9Z1 38 9Z1 H7 H7 H 0 1 N N N 18.956 136.402 27.330 3.692 1.570 2.200 H7 9Z1 39 9Z1 H8 H8 H 0 1 N N N 19.303 138.153 27.533 2.685 1.465 3.664 H8 9Z1 40 9Z1 H9 H9 H 0 1 N N N 18.976 131.391 32.406 0.247 -3.392 -2.758 H9 9Z1 41 9Z1 H10 H10 H 0 1 N N N 19.834 132.904 32.856 -0.845 -1.998 -2.576 H10 9Z1 42 9Z1 H11 H11 H 0 1 N N N 18.124 132.660 33.349 0.556 -1.894 -3.668 H11 9Z1 43 9Z1 H12 H12 H 0 1 N N N 17.427 134.308 33.863 2.673 0.158 -3.739 H12 9Z1 44 9Z1 H13 H13 H 0 1 N N N 15.398 135.713 28.963 3.080 -1.512 1.458 H13 9Z1 45 9Z1 H14 H14 H 0 1 N N N 20.403 132.123 27.536 -3.056 -1.865 0.606 H14 9Z1 46 9Z1 H15 H15 H 0 1 N N N 22.183 130.081 28.488 -5.765 -1.622 0.067 H15 9Z1 47 9Z1 H16 H16 H 0 1 N N N 25.557 132.685 28.759 -5.831 2.454 -1.146 H16 9Z1 48 9Z1 H17 H17 H 0 1 N N N 15.960 136.062 34.829 4.933 1.114 -3.428 H17 9Z1 49 9Z1 H18 H18 H 0 1 N N N 15.181 137.919 33.409 5.793 1.638 -1.215 H18 9Z1 50 9Z1 H19 H19 H 0 1 N N N 15.767 138.004 31.009 4.428 1.224 0.819 H19 9Z1 51 9Z1 H20 H20 H 0 1 N N N 17.478 139.484 29.563 2.252 2.891 0.627 H20 9Z1 52 9Z1 H21 H21 H 0 1 N N N 24.767 130.247 28.747 -7.228 0.351 -0.727 H21 9Z1 53 9Z1 H23 H23 H 0 1 N N N 20.120 136.160 31.263 0.262 2.207 -0.435 H23 9Z1 54 9Z1 H24 H24 H 0 1 N N N 15.847 132.921 27.066 0.864 -4.164 1.744 H24 9Z1 55 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9Z1 O19 C18 DOUB N N 1 9Z1 O21 C20 SING N N 2 9Z1 C11 C8 SING N N 3 9Z1 C12 C8 SING N N 4 9Z1 C18 C20 SING N N 5 9Z1 C18 N17 SING N N 6 9Z1 C20 C22 DOUB N N 7 9Z1 C24 C25 SING N N 8 9Z1 C24 C23 DOUB N E 9 9Z1 C25 C26 DOUB Y N 10 9Z1 C25 N29 SING Y N 11 9Z1 C26 N27 SING Y N 12 9Z1 N29 C28 DOUB Y N 13 9Z1 N27 C28 SING Y N 14 9Z1 C8 C7 SING N N 15 9Z1 C8 C9 SING N N 16 9Z1 C22 C7 SING N N 17 9Z1 N17 C23 SING N N 18 9Z1 N17 C13 SING N N 19 9Z1 C23 C30 SING N N 20 9Z1 C7 C13 SING N N 21 9Z1 C7 C6 SING N N 22 9Z1 C9 C10 DOUB N N 23 9Z1 C13 N32 SING N N 24 9Z1 C13 N14 SING N N 25 9Z1 C30 O31 DOUB N N 26 9Z1 C30 N32 SING N N 27 9Z1 C6 C5 DOUB Y N 28 9Z1 C6 C1 SING Y N 29 9Z1 N14 O15 SING N N 30 9Z1 N14 C1 SING N N 31 9Z1 O15 C16 SING N N 32 9Z1 C5 C4 SING Y N 33 9Z1 C1 C2 DOUB Y N 34 9Z1 C4 C3 DOUB Y N 35 9Z1 C2 C3 SING Y N 36 9Z1 C11 H1 SING N N 37 9Z1 C11 H2 SING N N 38 9Z1 C11 H3 SING N N 39 9Z1 C10 H4 SING N N 40 9Z1 C10 H5 SING N N 41 9Z1 C12 H6 SING N N 42 9Z1 C12 H7 SING N N 43 9Z1 C12 H8 SING N N 44 9Z1 C16 H9 SING N N 45 9Z1 C16 H10 SING N N 46 9Z1 C16 H11 SING N N 47 9Z1 C2 H12 SING N N 48 9Z1 C22 H13 SING N N 49 9Z1 C24 H14 SING N N 50 9Z1 C26 H15 SING N N 51 9Z1 C28 H16 SING N N 52 9Z1 C3 H17 SING N N 53 9Z1 C4 H18 SING N N 54 9Z1 C5 H19 SING N N 55 9Z1 C9 H20 SING N N 56 9Z1 N27 H21 SING N N 57 9Z1 N32 H23 SING N N 58 9Z1 O21 H24 SING N N 59 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9Z1 SMILES ACDLabs 12.01 "CC(C)(C35C2(NC(\C(=C/c1cncn1)N2C(C(=C3)O)=O)=O)N(c4ccccc45)OC)/C=C" 9Z1 InChI InChI 1.03 "InChI=1S/C23H23N5O4/c1-5-21(2,3)22-11-18(29)20(31)27-17(10-14-12-24-13-25-14)19(30)26-23(22,27)28(32-4)16-9-7-6-8-15(16)22/h5-13,29H,1H2,2-4H3,(H,24,25)(H,26,30)/b17-10+/t22-,23-/m0/s1" 9Z1 InChIKey InChI 1.03 JTJJJLSLKZFEPJ-ZAYCRUKZSA-N 9Z1 SMILES_CANONICAL CACTVS 3.385 "CON1c2ccccc2[C@@]3(C=C(O)C(=O)N4C(=C/c5c[nH]cn5)/C(=O)N[C@@]134)C(C)(C)C=C" 9Z1 SMILES CACTVS 3.385 "CON1c2ccccc2[C]3(C=C(O)C(=O)N4C(=Cc5c[nH]cn5)C(=O)N[C]134)C(C)(C)C=C" 9Z1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)(C=C)[C@@]12C=C(C(=O)N\3[C@]1(NC(=O)/C3=C\c4c[nH]cn4)N(c5c2cccc5)OC)O" 9Z1 SMILES "OpenEye OEToolkits" 2.0.6 "CC(C)(C=C)C12C=C(C(=O)N3C1(NC(=O)C3=Cc4c[nH]cn4)N(c5c2cccc5)OC)O" # _pdbx_chem_comp_identifier.comp_id 9Z1 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "(3E,7aR,12aS)-6-hydroxy-3-[(1H-imidazol-4-yl)methylidene]-12-methoxy-7a-(2-methylbut-3-en-2-yl)-7a,12-dihydro-1H,5H-imidazo[1',2':1,2]pyrido[2,3-b]indole-2,5(3H)-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9Z1 "Create component" 2017-06-27 RCSB 9Z1 "Initial release" 2018-06-27 RCSB 9Z1 "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 9Z1 _pdbx_chem_comp_synonyms.name Meleagrin _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##