data_A1H8J
#
_chem_comp.id A1H8J
_chem_comp.name "4-[(4-methylpiperazin-1-yl)methyl]-N-[[4-(trifluoromethyl)phenyl]methyl]aniline"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H24 F3 N3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2024-04-16
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 363.420
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1H8J
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 9EXI
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1H8J C1 C1 C 0 1 N N N N N N 331.350 282.146 254.785 8.220 2.718 -0.273 C1 A1H8J 1
A1H8J N1 N1 N 0 1 N N N N N N 330.467 281.894 253.639 7.481 1.512 0.126 N1 A1H8J 2
A1H8J C2 C2 C 0 1 N N N N N N 329.923 280.542 253.817 7.613 0.455 -0.886 C2 A1H8J 3
A1H8J C3 C3 C 0 1 N N N N N N 329.086 280.159 252.594 6.898 -0.807 -0.398 C3 A1H8J 4
A1H8J N2 N2 N 0 1 N N N N N N 329.942 280.122 251.402 5.484 -0.498 -0.143 N2 A1H8J 5
A1H8J C4 C4 C 0 1 N N N N N N 329.057 279.869 250.257 4.745 -1.704 0.256 C4 A1H8J 6
A1H8J C5 C5 C 0 1 Y N N N N N 329.890 279.575 249.035 3.268 -1.406 0.269 C5 A1H8J 7
A1H8J C6 C6 C 0 1 Y N N N N N 330.255 278.273 248.746 2.514 -1.603 -0.873 C6 A1H8J 8
A1H8J C7 C7 C 0 1 Y N N N N N 331.017 277.999 247.628 1.160 -1.332 -0.864 C7 A1H8J 9
A1H8J C8 C8 C 0 1 Y N N N N N 331.418 279.034 246.792 0.555 -0.860 0.294 C8 A1H8J 10
A1H8J N3 N3 N 0 1 N N N N N N 332.189 278.762 245.661 -0.813 -0.580 0.305 N3 A1H8J 11
A1H8J C9 C9 C 0 1 N N N N N N 332.612 279.854 244.782 -1.613 -0.787 -0.904 C9 A1H8J 12
A1H8J C10 C10 C 0 1 Y N N N N N 333.426 279.296 243.643 -3.046 -0.412 -0.629 C10 A1H8J 13
A1H8J C11 C11 C 0 1 Y N N N N N 332.802 278.905 242.473 -3.930 -1.362 -0.154 C11 A1H8J 14
A1H8J C12 C12 C 0 1 Y N N N N N 333.548 278.392 241.428 -5.244 -1.017 0.104 C12 A1H8J 15
A1H8J C13 C13 C 0 1 Y N N N N N 334.919 278.273 241.552 -5.673 0.279 -0.113 C13 A1H8J 16
A1H8J C14 C14 C 0 1 Y N N N N N 335.544 278.664 242.722 -4.789 1.230 -0.588 C14 A1H8J 17
A1H8J C15 C15 C 0 1 Y N N N N N 334.798 279.180 243.765 -3.476 0.884 -0.846 C15 A1H8J 18
A1H8J C16 C16 C 0 1 N N N N N N 335.734 277.713 240.415 -7.105 0.655 0.166 C16 A1H8J 19
A1H8J F1 F1 F 0 1 N N N N N N 336.136 278.757 239.573 -7.928 -0.458 -0.037 F1 A1H8J 20
A1H8J F2 F2 F 0 1 N N N N N N 336.862 277.063 240.923 -7.224 1.087 1.492 F2 A1H8J 21
A1H8J F3 F3 F 0 1 N N N N N N 334.957 276.803 239.691 -7.494 1.686 -0.697 F3 A1H8J 22
A1H8J C17 C17 C 0 1 Y N N N N N 331.050 280.341 247.086 1.316 -0.664 1.440 C17 A1H8J 23
A1H8J C18 C18 C 0 1 Y N N N N N 330.283 280.607 248.202 2.668 -0.943 1.426 C18 A1H8J 24
A1H8J C19 C19 C 0 1 N N N N N N 330.485 281.474 251.225 5.352 0.559 0.869 C19 A1H8J 25
A1H8J C20 C20 C 0 1 N N N N N N 331.321 281.856 252.446 6.067 1.821 0.381 C20 A1H8J 26
A1H8J H2 H1 H 0 1 N N N N N N 330.752 282.183 255.708 7.826 3.089 -1.219 H2 A1H8J 27
A1H8J H1 H2 H 0 1 N N N N N N 332.092 281.337 254.861 8.106 3.484 0.494 H1 A1H8J 28
A1H8J H3 H3 H 0 1 N N N N N N 331.868 283.106 254.645 9.276 2.475 -0.389 H3 A1H8J 29
A1H8J H4 H5 H 0 1 N N N N N N 329.290 280.518 254.716 7.163 0.789 -1.821 H4 A1H8J 30
A1H8J H5 H6 H 0 1 N N N N N N 330.751 279.827 253.932 8.668 0.236 -1.048 H5 A1H8J 31
A1H8J H6 H7 H 0 1 N N N N N N 328.289 280.903 252.449 6.969 -1.583 -1.160 H6 A1H8J 32
A1H8J H7 H8 H 0 1 N N N N N N 328.638 279.167 252.753 7.365 -1.157 0.523 H7 A1H8J 33
A1H8J H8 H10 H 0 1 N N N N N N 328.434 280.756 250.072 4.948 -2.506 -0.454 H8 A1H8J 34
A1H8J H9 H11 H 0 1 N N N N N N 328.410 279.007 250.477 5.063 -2.011 1.252 H9 A1H8J 35
A1H8J H10 H12 H 0 1 N N N N N N 329.943 277.469 249.396 2.985 -1.969 -1.774 H10 A1H8J 36
A1H8J H11 H13 H 0 1 N N N N N N 331.301 276.982 247.403 0.572 -1.485 -1.757 H11 A1H8J 37
A1H8J H12 H14 H 0 1 N N N N N N 331.661 278.126 245.098 -1.233 -0.247 1.114 H12 A1H8J 38
A1H8J H13 H15 H 0 1 N N N N N N 333.223 280.569 245.353 -1.223 -0.165 -1.709 H13 A1H8J 39
A1H8J H14 H16 H 0 1 N N N N N N 331.725 280.367 244.382 -1.562 -1.836 -1.198 H14 A1H8J 40
A1H8J H15 H17 H 0 1 N N N N N N 331.731 279.000 242.375 -3.595 -2.375 0.016 H15 A1H8J 41
A1H8J H16 H18 H 0 1 N N N N N N 333.059 278.084 240.515 -5.935 -1.760 0.475 H16 A1H8J 42
A1H8J H17 H19 H 0 1 N N N N N N 336.615 278.566 242.821 -5.124 2.242 -0.758 H17 A1H8J 43
A1H8J H18 H20 H 0 1 N N N N N N 335.287 279.493 244.676 -2.784 1.628 -1.214 H18 A1H8J 44
A1H8J H19 H21 H 0 1 N N N N N N 331.364 281.149 246.441 0.849 -0.298 2.343 H19 A1H8J 45
A1H8J H20 H22 H 0 1 N N N N N N 329.989 281.622 248.425 3.260 -0.791 2.317 H20 A1H8J 46
A1H8J H22 H23 H 0 1 N N N N N N 331.118 281.499 250.326 4.297 0.779 1.031 H22 A1H8J 47
A1H8J H21 H24 H 0 1 N N N N N N 329.657 282.189 251.111 5.802 0.225 1.804 H21 A1H8J 48
A1H8J H23 H25 H 0 1 N N N N N N 332.118 281.112 252.591 5.996 2.597 1.143 H23 A1H8J 49
A1H8J H24 H26 H 0 1 N N N N N N 331.770 282.847 252.286 5.600 2.171 -0.540 H24 A1H8J 50
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1H8J F1 C16 SING N N 1
A1H8J F3 C16 SING N N 2
A1H8J C16 F2 SING N N 3
A1H8J C16 C13 SING N N 4
A1H8J C12 C13 DOUB Y N 5
A1H8J C12 C11 SING Y N 6
A1H8J C13 C14 SING Y N 7
A1H8J C11 C10 DOUB Y N 8
A1H8J C14 C15 DOUB Y N 9
A1H8J C10 C15 SING Y N 10
A1H8J C10 C9 SING N N 11
A1H8J C9 N3 SING N N 12
A1H8J N3 C8 SING N N 13
A1H8J C8 C17 DOUB Y N 14
A1H8J C8 C7 SING Y N 15
A1H8J C17 C18 SING Y N 16
A1H8J C7 C6 DOUB Y N 17
A1H8J C18 C5 DOUB Y N 18
A1H8J C6 C5 SING Y N 19
A1H8J C5 C4 SING N N 20
A1H8J C4 N2 SING N N 21
A1H8J C19 N2 SING N N 22
A1H8J C19 C20 SING N N 23
A1H8J N2 C3 SING N N 24
A1H8J C20 N1 SING N N 25
A1H8J C3 C2 SING N N 26
A1H8J N1 C2 SING N N 27
A1H8J N1 C1 SING N N 28
A1H8J C1 H2 SING N N 29
A1H8J C1 H1 SING N N 30
A1H8J C1 H3 SING N N 31
A1H8J C2 H4 SING N N 32
A1H8J C2 H5 SING N N 33
A1H8J C3 H6 SING N N 34
A1H8J C3 H7 SING N N 35
A1H8J C4 H8 SING N N 36
A1H8J C4 H9 SING N N 37
A1H8J C6 H10 SING N N 38
A1H8J C7 H11 SING N N 39
A1H8J N3 H12 SING N N 40
A1H8J C9 H13 SING N N 41
A1H8J C9 H14 SING N N 42
A1H8J C11 H15 SING N N 43
A1H8J C12 H16 SING N N 44
A1H8J C14 H17 SING N N 45
A1H8J C15 H18 SING N N 46
A1H8J C17 H19 SING N N 47
A1H8J C18 H20 SING N N 48
A1H8J C19 H22 SING N N 49
A1H8J C19 H21 SING N N 50
A1H8J C20 H23 SING N N 51
A1H8J C20 H24 SING N N 52
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1H8J InChI InChI 1.06 "InChI=1S/C20H24F3N3/c1-25-10-12-26(13-11-25)15-17-4-8-19(9-5-17)24-14-16-2-6-18(7-3-16)20(21,22)23/h2-9,24H,10-15H2,1H3"
A1H8J InChIKey InChI 1.06 UWUHFJDBLCVQMN-UHFFFAOYSA-N
A1H8J SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)Cc2ccc(NCc3ccc(cc3)C(F)(F)F)cc2"
A1H8J SMILES CACTVS 3.385 "CN1CCN(CC1)Cc2ccc(NCc3ccc(cc3)C(F)(F)F)cc2"
A1H8J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1CCN(CC1)Cc2ccc(cc2)NCc3ccc(cc3)C(F)(F)F"
A1H8J SMILES "OpenEye OEToolkits" 2.0.7 "CN1CCN(CC1)Cc2ccc(cc2)NCc3ccc(cc3)C(F)(F)F"
#
_pdbx_chem_comp_identifier.comp_id A1H8J
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "4-[(4-methylpiperazin-1-yl)methyl]-~{N}-[[4-(trifluoromethyl)phenyl]methyl]aniline"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1H8J "Create component" 2024-04-16 PDBE
A1H8J "Initial release" 2024-10-02 RCSB
#