data_A1LWV # _chem_comp.id A1LWV _chem_comp.name "(2~{S})-2-azanyl-6-(5-oxidanylidenepentanoylamino)hexanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C11 H20 N2 O4" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-18 _chem_comp.pdbx_modified_date 2024-01-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 244.287 _chem_comp.one_letter_code K _chem_comp.three_letter_code A1LWV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6IQH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1LWV N N1 N 0 1 N N N N N N 7.840 -2.310 96.396 4.910 1.741 -0.364 N A1LWV 1 A1LWV CA C1 C 0 1 N N S N N N 7.258 -3.633 96.206 4.874 0.435 0.307 CA A1LWV 2 A1LWV C C2 C 0 1 N N N N N N 8.363 -4.705 96.199 6.115 -0.345 -0.044 C A1LWV 3 A1LWV O O1 O 0 1 N N N N N N 8.199 -5.769 95.586 6.756 -0.050 -1.025 O A1LWV 4 A1LWV CB C3 C 0 1 N N N N N N 6.448 -3.669 94.899 3.638 -0.340 -0.152 CB A1LWV 5 A1LWV CG C4 C 0 1 N N N N N N 4.964 -3.901 95.090 2.376 0.389 0.315 CG A1LWV 6 A1LWV CD C5 C 0 1 N N N N N N 4.209 -2.651 95.453 1.140 -0.386 -0.145 CD A1LWV 7 A1LWV CE C6 C 0 1 N N N N N N 3.242 -2.324 94.327 -0.122 0.343 0.322 CE A1LWV 8 A1LWV NZ N2 N 0 1 N N N N N N 3.003 -3.565 93.518 -1.306 -0.399 -0.118 NZ A1LWV 9 A1LWV C1 C7 C 0 1 N N N N N N 4.917 -0.169 88.942 -7.496 -0.032 0.196 C1 A1LWV 10 A1LWV C2 C8 C 0 1 N N N N N N 3.777 -1.142 89.118 -6.254 -0.751 -0.264 C2 A1LWV 11 A1LWV C3 C9 C 0 1 N N N N N N 4.081 -2.187 90.156 -5.017 0.024 0.195 C3 A1LWV 12 A1LWV C4 C10 C 0 1 N N N N N N 3.215 -2.043 91.386 -3.756 -0.705 -0.271 C4 A1LWV 13 A1LWV C5 C11 C 0 1 N N N N N N 2.999 -3.370 92.084 -2.538 0.059 0.181 C5 A1LWV 14 A1LWV O1 O2 O 0 1 N N N N N N 5.359 0.089 87.782 -8.344 0.281 -0.606 O1 A1LWV 15 A1LWV O3 O3 O 0 1 N N N N N N 2.799 -4.421 91.399 -2.666 1.085 0.814 O3 A1LWV 16 A1LWV H1 H1 H 0 1 N N N N N N 8.365 -2.295 97.247 5.682 2.298 -0.029 H1 A1LWV 17 A1LWV H2 H2 H 0 1 N N N N N N 8.445 -2.099 95.628 4.951 1.632 -1.366 H2 A1LWV 18 A1LWV H4 H4 H 0 1 N N N N N N 6.574 -3.851 97.040 4.831 0.582 1.386 H4 A1LWV 19 A1LWV H6 H6 H 0 1 N N N N N N 6.582 -2.706 94.384 3.636 -0.410 -1.240 H6 A1LWV 20 A1LWV H7 H7 H 0 1 N N N N N N 6.845 -4.480 94.270 3.657 -1.342 0.277 H7 A1LWV 21 A1LWV H8 H8 H 0 1 N N N N N N 4.549 -4.300 94.152 2.378 0.459 1.402 H8 A1LWV 22 A1LWV H9 H9 H 0 1 N N N N N N 4.826 -4.638 95.895 2.357 1.391 -0.114 H9 A1LWV 23 A1LWV H10 H10 H 0 1 N N N N N N 3.650 -2.814 96.386 1.138 -0.456 -1.232 H10 A1LWV 24 A1LWV H11 H11 H 0 1 N N N N N N 4.915 -1.818 95.589 1.159 -1.388 0.284 H11 A1LWV 25 A1LWV H12 H12 H 0 1 N N N N N N 2.290 -1.969 94.749 -0.120 0.413 1.410 H12 A1LWV 26 A1LWV H13 H13 H 0 1 N N N N N N 3.673 -1.542 93.685 -0.141 1.345 -0.107 H13 A1LWV 27 A1LWV H14 H14 H 0 1 N N N N N N 2.857 -4.460 93.939 -1.203 -1.220 -0.624 H14 A1LWV 28 A1LWV H15 H15 H 0 1 N N N N N N 5.357 0.308 89.805 -7.629 0.203 1.241 H15 A1LWV 29 A1LWV H16 H16 H 0 1 N N N N N N 2.880 -0.585 89.427 -6.234 -1.753 0.165 H16 A1LWV 30 A1LWV H17 H17 H 0 1 N N N N N N 3.585 -1.642 88.157 -6.255 -0.821 -1.352 H17 A1LWV 31 A1LWV H18 H18 H 0 1 N N N N N N 3.910 -3.181 89.718 -5.037 1.027 -0.233 H18 A1LWV 32 A1LWV H19 H19 H 0 1 N N N N N N 5.136 -2.094 90.453 -5.015 0.094 1.283 H19 A1LWV 33 A1LWV H20 H20 H 0 1 N N N N N N 3.704 -1.349 92.086 -3.736 -1.707 0.157 H20 A1LWV 34 A1LWV H21 H21 H 0 1 N N N N N N 2.238 -1.635 91.087 -3.757 -0.775 -1.359 H21 A1LWV 35 A1LWV OXT OXT O 0 1 N N N N N N ? ? ? 6.509 -1.366 0.733 OXT A1LWV 36 A1LWV H3 H3 H 0 1 N N N N N N ? ? ? 7.311 -1.836 0.467 H3 A1LWV 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LWV N CA SING N N 1 A1LWV CA CB SING N N 2 A1LWV CA C SING N N 3 A1LWV C O DOUB N N 4 A1LWV CB CG SING N N 5 A1LWV CG CD SING N N 6 A1LWV CD CE SING N N 7 A1LWV CE NZ SING N N 8 A1LWV NZ C5 SING N N 9 A1LWV C1 C2 SING N N 10 A1LWV C1 O1 DOUB N N 11 A1LWV C2 C3 SING N N 12 A1LWV C3 C4 SING N N 13 A1LWV C4 C5 SING N N 14 A1LWV C5 O3 DOUB N N 15 A1LWV N H1 SING N N 16 A1LWV N H2 SING N N 17 A1LWV CA H4 SING N N 18 A1LWV CB H6 SING N N 19 A1LWV CB H7 SING N N 20 A1LWV CG H8 SING N N 21 A1LWV CG H9 SING N N 22 A1LWV CD H10 SING N N 23 A1LWV CD H11 SING N N 24 A1LWV CE H12 SING N N 25 A1LWV CE H13 SING N N 26 A1LWV NZ H14 SING N N 27 A1LWV C1 H15 SING N N 28 A1LWV C2 H16 SING N N 29 A1LWV C2 H17 SING N N 30 A1LWV C3 H18 SING N N 31 A1LWV C3 H19 SING N N 32 A1LWV C4 H20 SING N N 33 A1LWV C4 H21 SING N N 34 A1LWV C OXT SING N N 35 A1LWV OXT H3 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1LWV InChI InChI 1.06 "InChI=1S/C11H20N2O4/c12-9(11(16)17)5-1-3-7-13-10(15)6-2-4-8-14/h8-9H,1-7,12H2,(H,13,15)(H,16,17)/t9-/m0/s1" A1LWV InChIKey InChI 1.06 IUBWATAYLBDTRN-VIFPVBQESA-N A1LWV SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCCCNC(=O)CCCC=O)C(O)=O" A1LWV SMILES CACTVS 3.385 "N[CH](CCCCNC(=O)CCCC=O)C(O)=O" A1LWV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CCNC(=O)CCCC=O)C[C@@H](C(=O)O)N" A1LWV SMILES "OpenEye OEToolkits" 2.0.7 "C(CCNC(=O)CCCC=O)CC(C(=O)O)N" # _pdbx_chem_comp_identifier.comp_id A1LWV _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-6-(5-oxidanylidenepentanoylamino)hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1LWV "Create component" 2024-01-18 PDBJ A1LWV "Initial release" 2024-01-24 RCSB #